EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003449 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 158941 bases
Position: chrFYBX02009726.1:404231-563171
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005046	TRM	PF02005.16	4.7e-121	1	2
ENSEBUP00000005046	TRM	PF02005.16	4.7e-121	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005484	-	1743	-	ENSEBUP00000005046	580 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003449	trmt1	82	50.712	ENSG00000104907	TRMT1	77	75.510	Homo_sapiens
ENSEBUG00000003449	trmt1	82	52.415	ENSAMEG00000012598	TRMT1	90	50.000	Ailuropoda_melanoleuca
ENSEBUG00000003449	trmt1	83	41.146	ENSACIG00000018680	trmt1	89	41.146	Amphilophus_citrinellus
ENSEBUG00000003449	trmt1	75	52.335	ENSAOCG00000006781	trmt1	77	52.157	Amphiprion_ocellaris
ENSEBUG00000003449	trmt1	75	52.335	ENSAPEG00000007712	trmt1	77	52.157	Amphiprion_percula
ENSEBUG00000003449	trmt1	75	52.047	ENSATEG00000001872	trmt1	76	51.765	Anabas_testudineus
ENSEBUG00000003449	trmt1	78	53.889	ENSACAG00000003825	TRMT1	87	53.731	Anolis_carolinensis
ENSEBUG00000003449	trmt1	74	53.876	ENSANAG00000023016	TRMT1	82	53.801	Aotus_nancymaae
ENSEBUG00000003449	trmt1	75	51.072	ENSACLG00000010073	trmt1	93	48.155	Astatotilapia_calliptera
ENSEBUG00000003449	trmt1	80	50.545	ENSAMXG00000012026	trmt1	82	50.366	Astyanax_mexicanus
ENSEBUG00000003449	trmt1	75	53.269	ENSBTAG00000019325	TRMT1	74	53.191	Bos_taurus
ENSEBUG00000003449	trmt1	76	40.594	WBGene00006613	trm-1	95	40.990	Caenorhabditis_elegans
ENSEBUG00000003449	trmt1	74	54.175	ENSCJAG00000004566	TRMT1	79	54.102	Callithrix_jacchus
ENSEBUG00000003449	trmt1	75	54.423	ENSCAFG00000017070	TRMT1	90	51.664	Canis_familiaris
ENSEBUG00000003449	trmt1	75	53.908	ENSCAFG00020005397	TRMT1	88	51.619	Canis_lupus_dingo
ENSEBUG00000003449	trmt1	76	52.762	ENSCHIG00000013569	TRMT1	78	52.896	Capra_hircus
ENSEBUG00000003449	trmt1	67	53.378	ENSTSYG00000003207	TRMT1	88	46.864	Carlito_syrichta
ENSEBUG00000003449	trmt1	66	58.398	ENSCAPG00000003355	TRMT1	76	57.729	Cavia_aperea
ENSEBUG00000003449	trmt1	76	53.053	ENSCPOG00000011754	TRMT1	78	52.998	Cavia_porcellus
ENSEBUG00000003449	trmt1	86	48.671	ENSCCAG00000022263	TRMT1	96	48.671	Cebus_capucinus
ENSEBUG00000003449	trmt1	74	53.488	ENSCATG00000039850	TRMT1	78	53.411	Cercocebus_atys
ENSEBUG00000003449	trmt1	63	43.172	ENSCATG00000038220	-	82	43.172	Cercocebus_atys
ENSEBUG00000003449	trmt1	76	52.863	ENSCLAG00000015295	TRMT1	89	50.896	Chinchilla_lanigera
ENSEBUG00000003449	trmt1	67	52.643	ENSCSAG00000006500	TRMT1	89	52.643	Chlorocebus_sabaeus
ENSEBUG00000003449	trmt1	76	55.747	ENSCPBG00000023866	TRMT1	78	55.598	Chrysemys_picta_bellii
ENSEBUG00000003449	trmt1	76	41.714	ENSCING00000002884	-	91	41.923	Ciona_intestinalis
ENSEBUG00000003449	trmt1	76	43.393	ENSCSAVG00000010927	-	95	42.043	Ciona_savignyi
ENSEBUG00000003449	trmt1	74	38.104	ENSCANG00000040631	TRMT1	77	37.938	Colobus_angolensis_palliatus
ENSEBUG00000003449	trmt1	74	42.169	ENSCANG00000031650	-	77	42.245	Colobus_angolensis_palliatus
ENSEBUG00000003449	trmt1	75	53.939	ENSCGRG00001022594	Trmt1	79	52.998	Cricetulus_griseus_chok1gshd
ENSEBUG00000003449	trmt1	75	53.939	ENSCGRG00000017732	Trmt1	78	52.998	Cricetulus_griseus_crigri
ENSEBUG00000003449	trmt1	75	51.650	ENSCSEG00000001643	trmt1	84	51.373	Cynoglossus_semilaevis
ENSEBUG00000003449	trmt1	77	51.625	ENSCVAG00000011886	trmt1	79	51.346	Cyprinodon_variegatus
ENSEBUG00000003449	trmt1	75	49.621	ENSDARG00000010978	trmt1	77	49.046	Danio_rerio
ENSEBUG00000003449	trmt1	67	31.776	ENSDNOG00000048240	-	71	31.517	Dasypus_novemcinctus
ENSEBUG00000003449	trmt1	75	51.308	ENSDORG00000014298	Trmt1	78	51.060	Dipodomys_ordii
ENSEBUG00000003449	trmt1	74	45.040	FBgn0032430	CG6388	87	45.040	Drosophila_melanogaster
ENSEBUG00000003449	trmt1	76	53.053	ENSEASG00005004050	TRMT1	81	53.191	Equus_asinus_asinus
ENSEBUG00000003449	trmt1	76	53.053	ENSECAG00000016149	TRMT1	81	53.191	Equus_caballus
ENSEBUG00000003449	trmt1	56	45.098	ENSEEUG00000014102	-	89	45.299	Erinaceus_europaeus
ENSEBUG00000003449	trmt1	75	51.056	ENSELUG00000021659	trmt1	77	50.775	Esox_lucius
ENSEBUG00000003449	trmt1	82	50.733	ENSFCAG00000000483	TRMT1	87	50.963	Felis_catus
ENSEBUG00000003449	trmt1	76	53.000	ENSFDAG00000007386	TRMT1	78	52.907	Fukomys_damarensis
ENSEBUG00000003449	trmt1	74	52.250	ENSFHEG00000012865	trmt1	85	52.157	Fundulus_heteroclitus
ENSEBUG00000003449	trmt1	77	49.049	ENSGMOG00000006564	trmt1	99	46.643	Gadus_morhua
ENSEBUG00000003449	trmt1	75	52.469	ENSGAFG00000011862	trmt1	80	51.772	Gambusia_affinis
ENSEBUG00000003449	trmt1	75	49.126	ENSGACG00000000227	trmt1	81	49.597	Gasterosteus_aculeatus
ENSEBUG00000003449	trmt1	76	55.086	ENSGAGG00000016432	TRMT1	78	54.932	Gopherus_agassizii
ENSEBUG00000003449	trmt1	74	54.379	ENSGGOG00000014007	TRMT1	84	50.984	Gorilla_gorilla
ENSEBUG00000003449	trmt1	75	47.746	ENSHBUG00000008821	trmt1	85	47.521	Haplochromis_burtoni
ENSEBUG00000003449	trmt1	76	52.290	ENSHGLG00000015972	TRMT1	81	52.542	Heterocephalus_glaber_female
ENSEBUG00000003449	trmt1	67	52.561	ENSHGLG00100018112	TRMT1	78	52.632	Heterocephalus_glaber_male
ENSEBUG00000003449	trmt1	78	48.694	ENSHCOG00000009447	trmt1	82	48.496	Hippocampus_comes
ENSEBUG00000003449	trmt1	78	57.488	ENSIPUG00000002899	trmt1	78	54.637	Ictalurus_punctatus
ENSEBUG00000003449	trmt1	75	53.737	ENSSTOG00000012531	TRMT1	79	53.772	Ictidomys_tridecemlineatus
ENSEBUG00000003449	trmt1	75	53.817	ENSJJAG00000017154	Trmt1	79	53.743	Jaculus_jaculus
ENSEBUG00000003449	trmt1	75	52.157	ENSKMAG00000011809	trmt1	86	51.976	Kryptolebias_marmoratus
ENSEBUG00000003449	trmt1	83	49.043	ENSLBEG00000012703	trmt1	85	48.958	Labrus_bergylta
ENSEBUG00000003449	trmt1	76	45.962	ENSLACG00000014585	TRMT1	85	45.736	Latimeria_chalumnae
ENSEBUG00000003449	trmt1	67	53.846	ENSLOCG00000006479	trmt1	82	53.728	Lepisosteus_oculatus
ENSEBUG00000003449	trmt1	76	52.662	ENSLAFG00000014072	TRMT1	80	52.998	Loxodonta_africana
ENSEBUG00000003449	trmt1	74	53.488	ENSMFAG00000033143	TRMT1	78	53.411	Macaca_fascicularis
ENSEBUG00000003449	trmt1	74	54.175	ENSMMUG00000001167	TRMT1	81	53.740	Macaca_mulatta
ENSEBUG00000003449	trmt1	74	60.377	ENSMNEG00000037867	TRMT1	78	53.216	Macaca_nemestrina
ENSEBUG00000003449	trmt1	74	53.971	ENSMLEG00000016142	TRMT1	78	53.216	Mandrillus_leucophaeus
ENSEBUG00000003449	trmt1	83	49.306	ENSMAMG00000004357	trmt1	86	49.308	Mastacembelus_armatus
ENSEBUG00000003449	trmt1	75	51.072	ENSMZEG00005014510	trmt1	86	48.155	Maylandia_zebra
ENSEBUG00000003449	trmt1	76	54.669	ENSMAUG00000011134	Trmt1	77	55.090	Mesocricetus_auratus
ENSEBUG00000003449	trmt1	74	53.682	ENSMICG00000000793	TRMT1	77	53.606	Microcebus_murinus
ENSEBUG00000003449	trmt1	75	52.399	ENSMOCG00000015895	Trmt1	78	52.611	Microtus_ochrogaster
ENSEBUG00000003449	trmt1	75	51.866	ENSMMOG00000011097	trmt1	83	51.683	Mola_mola
ENSEBUG00000003449	trmt1	78	52.632	ENSMODG00000011619	TRMT1	87	52.552	Monodelphis_domestica
ENSEBUG00000003449	trmt1	75	54.158	MGP_CAROLIEiJ_G0031304	Trmt1	87	54.185	Mus_caroli
ENSEBUG00000003449	trmt1	75	53.722	ENSMUSG00000001909	Trmt1	90	52.991	Mus_musculus
ENSEBUG00000003449	trmt1	75	53.722	MGP_SPRETEiJ_G0032422	Trmt1	90	52.991	Mus_spretus
ENSEBUG00000003449	trmt1	76	54.215	ENSMPUG00000004210	TRMT1	82	51.664	Mustela_putorius_furo
ENSEBUG00000003449	trmt1	76	53.817	ENSMLUG00000012809	TRMT1	77	53.965	Myotis_lucifugus
ENSEBUG00000003449	trmt1	76	53.232	ENSNGAG00000022486	Trmt1	78	53.578	Nannospalax_galili
ENSEBUG00000003449	trmt1	61	51.439	ENSNBRG00000024376	trmt1	86	46.547	Neolamprologus_brichardi
ENSEBUG00000003449	trmt1	71	56.655	ENSNLEG00000013019	-	73	66.337	Nomascus_leucogenys
ENSEBUG00000003449	trmt1	75	53.831	ENSMEUG00000013756	TRMT1	87	53.953	Notamacropus_eugenii
ENSEBUG00000003449	trmt1	65	69.811	ENSOPRG00000009471	-	63	69.811	Ochotona_princeps
ENSEBUG00000003449	trmt1	75	53.935	ENSODEG00000010323	TRMT1	79	53.861	Octodon_degus
ENSEBUG00000003449	trmt1	75	52.632	ENSONIG00000000400	trmt1	85	50.951	Oreochromis_niloticus
ENSEBUG00000003449	trmt1	67	51.789	ENSOCUG00000021934	TRMT1	90	51.789	Oryctolagus_cuniculus
ENSEBUG00000003449	trmt1	78	47.882	ENSORLG00000020074	trmt1	85	47.681	Oryzias_latipes
ENSEBUG00000003449	trmt1	75	51.845	ENSORLG00020007561	trmt1	81	51.663	Oryzias_latipes_hni
ENSEBUG00000003449	trmt1	78	51.277	ENSORLG00015006547	trmt1	81	50.188	Oryzias_latipes_hsok
ENSEBUG00000003449	trmt1	75	52.437	ENSOMEG00000019343	trmt1	78	52.157	Oryzias_melastigma
ENSEBUG00000003449	trmt1	75	54.771	ENSOGAG00000025576	TRMT1	81	53.295	Otolemur_garnettii
ENSEBUG00000003449	trmt1	75	46.562	ENSOARG00000009397	TRMT1	72	46.471	Ovis_aries
ENSEBUG00000003449	trmt1	75	56.148	ENSPPRG00000012117	TRMT1	87	53.247	Panthera_pardus
ENSEBUG00000003449	trmt1	56	62.637	ENSPTIG00000008833	TRMT1	82	57.343	Panthera_tigris_altaica
ENSEBUG00000003449	trmt1	67	46.135	ENSPTRG00000050421	-	63	46.310	Pan_troglodytes
ENSEBUG00000003449	trmt1	82	51.068	ENSPTRG00000010557	TRMT1	84	50.984	Pan_troglodytes
ENSEBUG00000003449	trmt1	62	44.244	ENSPANG00000034058	-	78	44.570	Papio_anubis
ENSEBUG00000003449	trmt1	74	54.175	ENSPANG00000009247	TRMT1	78	53.411	Papio_anubis
ENSEBUG00000003449	trmt1	75	52.456	ENSPKIG00000005309	trmt1	76	52.277	Paramormyrops_kingsleyae
ENSEBUG00000003449	trmt1	76	47.093	ENSPSIG00000008762	TRMT1	75	46.875	Pelodiscus_sinensis
ENSEBUG00000003449	trmt1	75	68.519	ENSPMGG00000019764	trmt1	69	68.519	Periophthalmus_magnuspinnatus
ENSEBUG00000003449	trmt1	75	54.141	ENSPEMG00000016247	Trmt1	78	53.385	Peromyscus_maniculatus_bairdii
ENSEBUG00000003449	trmt1	74	58.498	ENSPMAG00000004329	trmt1	80	58.367	Petromyzon_marinus
ENSEBUG00000003449	trmt1	75	54.706	ENSPCIG00000019273	TRMT1	79	54.635	Phascolarctos_cinereus
ENSEBUG00000003449	trmt1	75	51.953	ENSPFOG00000008527	trmt1	79	51.772	Poecilia_formosa
ENSEBUG00000003449	trmt1	75	52.250	ENSPLAG00000018788	trmt1	87	51.969	Poecilia_latipinna
ENSEBUG00000003449	trmt1	75	51.953	ENSPMEG00000013120	trmt1	79	51.772	Poecilia_mexicana
ENSEBUG00000003449	trmt1	75	51.758	ENSPREG00000000211	trmt1	77	51.575	Poecilia_reticulata
ENSEBUG00000003449	trmt1	74	53.876	ENSPPYG00000009622	TRMT1	78	53.801	Pongo_abelii
ENSEBUG00000003449	trmt1	76	51.336	ENSPCAG00000003698	TRMT1	79	51.451	Procavia_capensis
ENSEBUG00000003449	trmt1	74	53.550	ENSPCOG00000008653	TRMT1	78	53.216	Propithecus_coquereli
ENSEBUG00000003449	trmt1	88	48.922	ENSPVAG00000015076	TRMT1	78	53.216	Pteropus_vampyrus
ENSEBUG00000003449	trmt1	75	48.249	ENSPNYG00000013960	trmt1	83	48.039	Pundamilia_nyererei
ENSEBUG00000003449	trmt1	75	54.584	ENSPNAG00000024859	trmt1	78	54.506	Pygocentrus_nattereri
ENSEBUG00000003449	trmt1	77	53.208	ENSRNOG00000002914	Trmt1	82	53.551	Rattus_norvegicus
ENSEBUG00000003449	trmt1	74	53.682	ENSRBIG00000038324	TRMT1	78	53.606	Rhinopithecus_bieti
ENSEBUG00000003449	trmt1	75	37.931	ENSRBIG00000037505	-	78	38.310	Rhinopithecus_bieti
ENSEBUG00000003449	trmt1	75	37.165	ENSRROG00000031847	-	77	37.525	Rhinopithecus_roxellana
ENSEBUG00000003449	trmt1	74	53.682	ENSRROG00000028599	TRMT1	78	53.606	Rhinopithecus_roxellana
ENSEBUG00000003449	trmt1	73	32.068	YDR120C	-	92	32.068	Saccharomyces_cerevisiae
ENSEBUG00000003449	trmt1	86	48.505	ENSSBOG00000028861	TRMT1	96	48.671	Saimiri_boliviensis_boliviensis
ENSEBUG00000003449	trmt1	75	54.280	ENSSHAG00000014381	TRMT1	86	53.346	Sarcophilus_harrisii
ENSEBUG00000003449	trmt1	76	51.731	ENSSFOG00015004139	trmt1	77	51.744	Scleropages_formosus
ENSEBUG00000003449	trmt1	83	48.103	ENSSMAG00000021136	trmt1	86	48.103	Scophthalmus_maximus
ENSEBUG00000003449	trmt1	83	48.174	ENSSDUG00000012740	trmt1	85	48.090	Seriola_dumerili
ENSEBUG00000003449	trmt1	83	48.174	ENSSLDG00000005971	trmt1	85	48.090	Seriola_lalandi_dorsalis
ENSEBUG00000003449	trmt1	75	53.462	ENSSARG00000005138	TRMT1	91	53.462	Sorex_araneus
ENSEBUG00000003449	trmt1	74	41.910	ENSSPUG00000001084	TRMT1	88	42.300	Sphenodon_punctatus
ENSEBUG00000003449	trmt1	75	50.389	ENSSPAG00000007153	trmt1	85	50.196	Stegastes_partitus
ENSEBUG00000003449	trmt1	76	53.359	ENSSSCG00000013744	TRMT1	81	53.891	Sus_scrofa
ENSEBUG00000003449	trmt1	77	51.124	ENSTRUG00000010700	trmt1	79	51.538	Takifugu_rubripes
ENSEBUG00000003449	trmt1	75	52.778	ENSTNIG00000018808	trmt1	88	52.600	Tetraodon_nigroviridis
ENSEBUG00000003449	trmt1	76	50.954	ENSTTRG00000006379	TRMT1	78	51.257	Tursiops_truncatus
ENSEBUG00000003449	trmt1	82	52.415	ENSUAMG00000022911	TRMT1	93	50.000	Ursus_americanus
ENSEBUG00000003449	trmt1	76	54.008	ENSUMAG00000006027	TRMT1	81	54.386	Ursus_maritimus
ENSEBUG00000003449	trmt1	75	54.423	ENSVVUG00000024177	TRMT1	86	51.664	Vulpes_vulpes
ENSEBUG00000003449	trmt1	65	52.070	ENSXETG00000033863	TRMT1	92	52.070	Xenopus_tropicalis
ENSEBUG00000003449	trmt1	75	51.758	ENSXCOG00000015733	trmt1	79	51.575	Xiphophorus_couchianus
ENSEBUG00000003449	trmt1	75	51.758	ENSXMAG00000013823	trmt1	88	51.575	Xiphophorus_maculatus