EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 168309 bases
Position: chrFYBX02010491.1:3452947-3621255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005053	zf-C3H1	PF10650.9	8.6e-10	1	1
ENSEBUP00000005079	zf-C3H1	PF10650.9	8.6e-10	1	1
ENSEBUP00000005122	zf-C3H1	PF10650.9	8.8e-10	1	1
ENSEBUP00000005158	zf-C3H1	PF10650.9	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005560	-	6385	-	ENSEBUP00000005122	2061 (aa)	-	-
ENSEBUT00000005491	-	6250	-	ENSEBUP00000005053	2016 (aa)	-	-
ENSEBUT00000005517	-	6250	-	ENSEBUP00000005079	2016 (aa)	-	-
ENSEBUT00000005596	-	7686	-	ENSEBUP00000005158	2061 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003491	-	61	40.614	ENSG00000133858	ZFC3H1	84	40.867	Homo_sapiens
ENSEBUG00000003491	-	61	40.680	ENSAMEG00000000498	ZFC3H1	84	40.682	Ailuropoda_melanoleuca
ENSEBUG00000003491	-	70	41.404	ENSAOCG00000022567	ZFC3H1	74	34.855	Amphiprion_ocellaris
ENSEBUG00000003491	-	85	41.529	ENSATEG00000015391	ZFC3H1	79	40.824	Anabas_testudineus
ENSEBUG00000003491	-	63	39.331	ENSAPLG00000016116	ZFC3H1	96	35.872	Anas_platyrhynchos
ENSEBUG00000003491	-	64	37.277	ENSACAG00000007327	ZFC3H1	91	32.369	Anolis_carolinensis
ENSEBUG00000003491	-	61	40.968	ENSANAG00000038329	ZFC3H1	86	41.080	Aotus_nancymaae
ENSEBUG00000003491	-	81	41.667	ENSACLG00000021274	ZFC3H1	89	36.174	Astatotilapia_calliptera
ENSEBUG00000003491	-	91	40.843	ENSAMXG00000042831	-	93	40.835	Astyanax_mexicanus
ENSEBUG00000003491	-	80	40.698	ENSBTAG00000012267	ZFC3H1	86	40.883	Bos_taurus
ENSEBUG00000003491	-	61	40.850	ENSCJAG00000001384	ZFC3H1	86	40.658	Callithrix_jacchus
ENSEBUG00000003491	-	61	41.011	ENSCAFG00000000453	ZFC3H1	82	41.197	Canis_familiaris
ENSEBUG00000003491	-	61	41.011	ENSCAFG00020016502	ZFC3H1	78	60.185	Canis_lupus_dingo
ENSEBUG00000003491	-	59	40.930	ENSCHIG00000020097	ZFC3H1	86	41.115	Capra_hircus
ENSEBUG00000003491	-	62	40.378	ENSTSYG00000005471	ZFC3H1	86	40.632	Carlito_syrichta
ENSEBUG00000003491	-	60	45.935	ENSCPOG00000009504	ZFC3H1	85	58.125	Cavia_porcellus
ENSEBUG00000003491	-	61	40.710	ENSCCAG00000035967	ZFC3H1	86	40.962	Cebus_capucinus
ENSEBUG00000003491	-	61	40.614	ENSCATG00000016321	ZFC3H1	84	40.867	Cercocebus_atys
ENSEBUG00000003491	-	61	40.666	ENSCLAG00000007646	ZFC3H1	86	40.684	Chinchilla_lanigera
ENSEBUG00000003491	-	87	40.488	ENSCSAG00000004100	ZFC3H1	84	40.867	Chlorocebus_sabaeus
ENSEBUG00000003491	-	52	41.501	ENSCPBG00000013449	ZFC3H1	87	41.355	Chrysemys_picta_bellii
ENSEBUG00000003491	-	61	40.614	ENSCANG00000030229	ZFC3H1	84	40.867	Colobus_angolensis_palliatus
ENSEBUG00000003491	-	68	35.964	ENSCGRG00001011660	Zfc3h1	82	38.947	Cricetulus_griseus_chok1gshd
ENSEBUG00000003491	-	62	40.867	ENSCGRG00000006894	Zfc3h1	99	36.785	Cricetulus_griseus_crigri
ENSEBUG00000003491	-	75	34.932	ENSCSEG00000021462	ZFC3H1	75	34.795	Cynoglossus_semilaevis
ENSEBUG00000003491	-	50	41.351	ENSCVAG00000019629	-	73	35.573	Cyprinodon_variegatus
ENSEBUG00000003491	-	61	40.355	ENSDNOG00000010314	ZFC3H1	84	40.098	Dasypus_novemcinctus
ENSEBUG00000003491	-	85	40.893	ENSEASG00005008229	ZFC3H1	84	40.904	Equus_asinus_asinus
ENSEBUG00000003491	-	61	41.011	ENSECAG00000026833	ZFC3H1	84	41.026	Equus_caballus
ENSEBUG00000003491	-	85	40.957	ENSELUG00000013421	-	72	35.455	Esox_lucius
ENSEBUG00000003491	-	59	50.000	ENSFCAG00000024198	ZFC3H1	82	50.489	Felis_catus
ENSEBUG00000003491	-	64	39.542	ENSFALG00000010320	ZFC3H1	74	38.462	Ficedula_albicollis
ENSEBUG00000003491	-	63	40.732	ENSFDAG00000017503	ZFC3H1	86	40.749	Fukomys_damarensis
ENSEBUG00000003491	-	58	40.304	ENSGMOG00000004527	-	70	40.093	Gadus_morhua
ENSEBUG00000003491	-	64	39.457	ENSGALG00000010177	ZFC3H1	91	38.542	Gallus_gallus
ENSEBUG00000003491	-	60	41.017	ENSGAFG00000013283	-	99	34.823	Gambusia_affinis
ENSEBUG00000003491	-	93	34.617	ENSGACG00000007651	ZFC3H1	90	33.904	Gasterosteus_aculeatus
ENSEBUG00000003491	-	52	41.618	ENSGAGG00000013798	ZFC3H1	93	41.540	Gopherus_agassizii
ENSEBUG00000003491	-	61	40.732	ENSGGOG00000025994	ZFC3H1	84	40.984	Gorilla_gorilla
ENSEBUG00000003491	-	90	38.075	ENSHGLG00000014297	ZFC3H1	91	38.110	Heterocephalus_glaber_female
ENSEBUG00000003491	-	93	37.890	ENSHGLG00100006263	ZFC3H1	98	38.110	Heterocephalus_glaber_male
ENSEBUG00000003491	-	62	40.749	ENSSTOG00000002650	ZFC3H1	87	40.767	Ictidomys_tridecemlineatus
ENSEBUG00000003491	-	81	40.452	ENSKMAG00000021476	-	83	36.697	Kryptolebias_marmoratus
ENSEBUG00000003491	-	61	36.763	ENSLBEG00000012352	-	76	35.256	Labrus_bergylta
ENSEBUG00000003491	-	84	39.216	ENSLACG00000002585	ZFC3H1	77	35.534	Latimeria_chalumnae
ENSEBUG00000003491	-	90	41.658	ENSLOCG00000016238	ZFC3H1	92	35.007	Lepisosteus_oculatus
ENSEBUG00000003491	-	85	34.107	ENSLAFG00000005820	ZFC3H1	91	40.493	Loxodonta_africana
ENSEBUG00000003491	-	59	40.614	ENSMFAG00000039403	ZFC3H1	84	40.867	Macaca_fascicularis
ENSEBUG00000003491	-	59	40.614	ENSMMUG00000020943	ZFC3H1	84	40.867	Macaca_mulatta
ENSEBUG00000003491	-	59	40.614	ENSMNEG00000008807	ZFC3H1	84	40.867	Macaca_nemestrina
ENSEBUG00000003491	-	61	40.614	ENSMLEG00000029967	ZFC3H1	84	40.867	Mandrillus_leucophaeus
ENSEBUG00000003491	-	83	42.975	ENSMAMG00000021320	ZFC3H1	82	35.774	Mastacembelus_armatus
ENSEBUG00000003491	-	63	39.913	ENSMGAG00000010716	ZFC3H1	97	38.710	Meleagris_gallopavo
ENSEBUG00000003491	-	61	40.732	ENSMICG00000009137	ZFC3H1	83	40.445	Microcebus_murinus
ENSEBUG00000003491	-	64	40.414	ENSMODG00000020408	ZFC3H1	81	39.869	Monodelphis_domestica
ENSEBUG00000003491	-	61	40.632	MGP_CAROLIEiJ_G0015814	Zfc3h1	82	40.000	Mus_caroli
ENSEBUG00000003491	-	61	40.398	ENSMUSG00000034163	Zfc3h1	83	39.767	Mus_musculus
ENSEBUG00000003491	-	62	38.290	MGP_PahariEiJ_G0031273	Zfc3h1	84	38.095	Mus_pahari
ENSEBUG00000003491	-	61	40.281	MGP_SPRETEiJ_G0016636	Zfc3h1	83	39.665	Mus_spretus
ENSEBUG00000003491	-	61	40.776	ENSMPUG00000017488	ZFC3H1	83	40.962	Mustela_putorius_furo
ENSEBUG00000003491	-	61	40.728	ENSMLUG00000011723	ZFC3H1	89	40.632	Myotis_lucifugus
ENSEBUG00000003491	-	61	40.828	ENSNGAG00000017623	Zfc3h1	85	40.845	Nannospalax_galili
ENSEBUG00000003491	-	61	40.378	ENSNLEG00000004372	ZFC3H1	84	40.047	Nomascus_leucogenys
ENSEBUG00000003491	-	64	36.325	ENSOPRG00000008075	ZFC3H1	63	37.445	Ochotona_princeps
ENSEBUG00000003491	-	55	36.428	ENSONIG00000018271	ZFC3H1	96	36.428	Oreochromis_niloticus
ENSEBUG00000003491	-	86	40.867	ENSOCUG00000004591	ZFC3H1	84	40.942	Oryctolagus_cuniculus
ENSEBUG00000003491	-	85	35.071	ENSORLG00000000155	-	73	34.917	Oryzias_latipes
ENSEBUG00000003491	-	76	35.690	ENSORLG00015020699	-	73	34.739	Oryzias_latipes_hsok
ENSEBUG00000003491	-	91	34.228	ENSOMEG00000015403	-	71	34.328	Oryzias_melastigma
ENSEBUG00000003491	-	61	40.142	ENSOGAG00000033606	ZFC3H1	83	40.094	Otolemur_garnettii
ENSEBUG00000003491	-	59	40.814	ENSOARG00000014589	ZFC3H1	86	40.999	Ovis_aries
ENSEBUG00000003491	-	61	40.614	ENSPPAG00000029409	ZFC3H1	84	40.867	Pan_paniscus
ENSEBUG00000003491	-	61	40.776	ENSPPRG00000010196	ZFC3H1	83	40.962	Panthera_pardus
ENSEBUG00000003491	-	61	40.776	ENSPTIG00000006898	ZFC3H1	83	40.962	Panthera_tigris_altaica
ENSEBUG00000003491	-	61	40.614	ENSPTRG00000005224	ZFC3H1	84	40.867	Pan_troglodytes
ENSEBUG00000003491	-	61	39.172	ENSPANG00000009558	ZFC3H1	83	39.437	Papio_anubis
ENSEBUG00000003491	-	94	34.561	ENSPKIG00000023219	ZFC3H1	92	33.821	Paramormyrops_kingsleyae
ENSEBUG00000003491	-	52	41.238	ENSPSIG00000012997	ZFC3H1	93	41.279	Pelodiscus_sinensis
ENSEBUG00000003491	-	82	34.505	ENSPMGG00000007504	ZFC3H1	81	33.615	Periophthalmus_magnuspinnatus
ENSEBUG00000003491	-	64	39.560	ENSPCIG00000025066	ZFC3H1	83	38.703	Phascolarctos_cinereus
ENSEBUG00000003491	-	50	41.343	ENSPFOG00000001903	-	87	36.026	Poecilia_formosa
ENSEBUG00000003491	-	69	39.309	ENSPMEG00000007517	-	76	33.233	Poecilia_mexicana
ENSEBUG00000003491	-	50	41.578	ENSPREG00000016974	ZFC3H1	87	35.850	Poecilia_reticulata
ENSEBUG00000003491	-	61	40.496	ENSPPYG00000004773	ZFC3H1	83	40.749	Pongo_abelii
ENSEBUG00000003491	-	94	32.245	ENSPCOG00000019879	ZFC3H1	83	40.563	Propithecus_coquereli
ENSEBUG00000003491	-	77	63.542	ENSPVAG00000012354	ZFC3H1	78	62.000	Pteropus_vampyrus
ENSEBUG00000003491	-	80	43.902	ENSPNYG00000005977	ZFC3H1	88	36.103	Pundamilia_nyererei
ENSEBUG00000003491	-	80	43.750	ENSPNAG00000017704	-	90	38.895	Pygocentrus_nattereri
ENSEBUG00000003491	-	56	36.451	ENSRNOG00000053060	Zfc3h1	75	36.176	Rattus_norvegicus
ENSEBUG00000003491	-	61	40.165	ENSRBIG00000028462	ZFC3H1	84	40.421	Rhinopithecus_bieti
ENSEBUG00000003491	-	61	40.614	ENSRROG00000040039	ZFC3H1	84	40.867	Rhinopithecus_roxellana
ENSEBUG00000003491	-	62	40.850	ENSSBOG00000032676	ZFC3H1	86	40.728	Saimiri_boliviensis_boliviensis
ENSEBUG00000003491	-	94	39.638	ENSSHAG00000002431	ZFC3H1	99	32.609	Sarcophilus_harrisii
ENSEBUG00000003491	-	99	33.657	ENSSFOG00015018112	ZFC3H1	94	36.041	Scleropages_formosus
ENSEBUG00000003491	-	70	41.335	ENSSMAG00000019783	ZFC3H1	73	35.063	Scophthalmus_maximus
ENSEBUG00000003491	-	83	42.488	ENSSDUG00000000244	ZFC3H1	68	41.745	Seriola_dumerili
ENSEBUG00000003491	-	77	41.545	ENSSLDG00000018408	ZFC3H1	66	41.772	Seriola_lalandi_dorsalis
ENSEBUG00000003491	-	74	51.307	ENSSARG00000008639	ZFC3H1	63	50.814	Sorex_araneus
ENSEBUG00000003491	-	71	39.948	ENSSPAG00000001916	-	63	39.791	Stegastes_partitus
ENSEBUG00000003491	-	78	40.541	ENSSSCG00000000509	ZFC3H1	86	40.728	Sus_scrofa
ENSEBUG00000003491	-	64	40.044	ENSTGUG00000007206	ZFC3H1	89	38.790	Taeniopygia_guttata
ENSEBUG00000003491	-	52	47.903	ENSTRUG00000004528	-	83	35.692	Takifugu_rubripes
ENSEBUG00000003491	-	64	48.787	ENSTBEG00000016441	ZFC3H1	70	48.128	Tupaia_belangeri
ENSEBUG00000003491	-	61	38.778	ENSTTRG00000007328	ZFC3H1	84	38.339	Tursiops_truncatus
ENSEBUG00000003491	-	61	41.011	ENSUAMG00000001880	ZFC3H1	84	41.026	Ursus_americanus
ENSEBUG00000003491	-	61	41.011	ENSUMAG00000021131	ZFC3H1	86	41.197	Ursus_maritimus
ENSEBUG00000003491	-	62	40.776	ENSVVUG00000008655	ZFC3H1	93	40.962	Vulpes_vulpes
ENSEBUG00000003491	-	70	36.147	ENSXETG00000033302	ZFC3H1	81	34.967	Xenopus_tropicalis
ENSEBUG00000003491	-	70	40.898	ENSXMAG00000006933	-	87	34.602	Xiphophorus_maculatus