EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003535 (Gene tree)
Gene ID: -
Gene Symbol: snrnp35
Alias: zgc:112337
Full Name: small nuclear ribonucleoprotein 35 (U11/U12)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 40142 bases
Position: chrFYBX02000056.1:1456480-1496621
Accession: ZDB-GENE-050706-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005125	RRM_1	PF00076.22	6.3e-16	1	1
ENSEBUP00000005134	RRM_1	PF00076.22	8.3e-16	1	1
ENSEBUP00000005142	RRM_1	PF00076.22	8.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005563	-	1791	-	ENSEBUP00000005125	267 (aa)	-	-
ENSEBUT00000005581	-	2572	-	ENSEBUP00000005142	326 (aa)	-	-
ENSEBUT00000005572	-	1726	-	ENSEBUP00000005134	312 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003535	snrnp35	64	59.412	ENSG00000184209	SNRNP35	68	60.119	Homo_sapiens
ENSEBUG00000003535	snrnp35	63	59.880	ENSAMEG00000019650	SNRNP35	68	59.880	Ailuropoda_melanoleuca
ENSEBUG00000003535	snrnp35	62	63.855	ENSACIG00000003238	snrnp35	78	63.855	Amphilophus_citrinellus
ENSEBUG00000003535	snrnp35	61	65.031	ENSAOCG00000007701	snrnp35	76	65.031	Amphiprion_ocellaris
ENSEBUG00000003535	snrnp35	65	63.218	ENSAPEG00000023725	snrnp35	82	63.218	Amphiprion_percula
ENSEBUG00000003535	snrnp35	62	64.242	ENSATEG00000021269	snrnp35	85	64.242	Anabas_testudineus
ENSEBUG00000003535	snrnp35	90	49.383	ENSAPLG00000015654	SNRNP35	68	61.310	Anas_platyrhynchos
ENSEBUG00000003535	snrnp35	62	62.651	ENSACAG00000015421	SNRNP35	65	61.905	Anolis_carolinensis
ENSEBUG00000003535	snrnp35	64	59.649	ENSANAG00000025109	SNRNP35	67	59.649	Aotus_nancymaae
ENSEBUG00000003535	snrnp35	62	63.855	ENSACLG00000020890	snrnp35	79	63.855	Astatotilapia_calliptera
ENSEBUG00000003535	snrnp35	62	63.855	ENSACLG00000020994	SNRNP35	79	63.855	Astatotilapia_calliptera
ENSEBUG00000003535	snrnp35	76	54.187	ENSAMXG00000026163	snrnp35	85	57.303	Astyanax_mexicanus
ENSEBUG00000003535	snrnp35	62	60.843	ENSBTAG00000008060	SNRNP35	68	60.843	Bos_taurus
ENSEBUG00000003535	snrnp35	64	59.649	ENSCJAG00000007131	SNRNP35	67	61.078	Callithrix_jacchus
ENSEBUG00000003535	snrnp35	62	60.241	ENSCAFG00000007484	SNRNP35	67	60.241	Canis_familiaris
ENSEBUG00000003535	snrnp35	62	60.241	ENSCAFG00020015272	-	67	60.241	Canis_lupus_dingo
ENSEBUG00000003535	snrnp35	62	60.843	ENSCHIG00000006364	SNRNP35	68	60.843	Capra_hircus
ENSEBUG00000003535	snrnp35	63	60.479	ENSTSYG00000034104	SNRNP35	68	59.763	Carlito_syrichta
ENSEBUG00000003535	snrnp35	62	62.048	ENSCPOG00000002548	SNRNP35	67	62.048	Cavia_porcellus
ENSEBUG00000003535	snrnp35	64	59.649	ENSCCAG00000001685	SNRNP35	68	59.649	Cebus_capucinus
ENSEBUG00000003535	snrnp35	63	60.479	ENSCATG00000021946	SNRNP35	68	60.479	Cercocebus_atys
ENSEBUG00000003535	snrnp35	62	61.446	ENSCLAG00000010232	SNRNP35	67	61.446	Chinchilla_lanigera
ENSEBUG00000003535	snrnp35	62	60.843	ENSCSAG00000018950	SNRNP35	67	60.843	Chlorocebus_sabaeus
ENSEBUG00000003535	snrnp35	62	60.843	ENSCHOG00000006263	SNRNP35	67	60.843	Choloepus_hoffmanni
ENSEBUG00000003535	snrnp35	87	51.653	ENSCPBG00000025965	SNRNP35	63	61.765	Chrysemys_picta_bellii
ENSEBUG00000003535	snrnp35	62	51.807	ENSCSAVG00000000748	-	93	51.807	Ciona_savignyi
ENSEBUG00000003535	snrnp35	64	59.649	ENSCANG00000025364	SNRNP35	67	61.078	Colobus_angolensis_palliatus
ENSEBUG00000003535	snrnp35	62	60.241	ENSCGRG00001012630	Snrnp35	67	60.241	Cricetulus_griseus_chok1gshd
ENSEBUG00000003535	snrnp35	62	60.241	ENSCGRG00000002063	Snrnp35	67	60.241	Cricetulus_griseus_crigri
ENSEBUG00000003535	snrnp35	63	61.905	ENSDARG00000099913	snrnp35	81	61.905	Danio_rerio
ENSEBUG00000003535	snrnp35	64	58.824	ENSDNOG00000038603	SNRNP35	67	60.241	Dasypus_novemcinctus
ENSEBUG00000003535	snrnp35	62	60.843	ENSDORG00000001859	Snrnp35	67	60.843	Dipodomys_ordii
ENSEBUG00000003535	snrnp35	62	60.241	ENSEASG00005012617	SNRNP35	68	59.524	Equus_asinus_asinus
ENSEBUG00000003535	snrnp35	62	60.241	ENSECAG00000006080	SNRNP35	68	59.524	Equus_caballus
ENSEBUG00000003535	snrnp35	63	61.310	ENSEEUG00000011544	SNRNP35	70	60.694	Erinaceus_europaeus
ENSEBUG00000003535	snrnp35	91	49.600	ENSELUG00000000071	snrnp35	69	61.446	Esox_lucius
ENSEBUG00000003535	snrnp35	63	60.479	ENSFCAG00000001159	SNRNP35	67	60.479	Felis_catus
ENSEBUG00000003535	snrnp35	63	61.310	ENSFALG00000014650	SNRNP35	69	61.310	Ficedula_albicollis
ENSEBUG00000003535	snrnp35	62	52.410	ENSFDAG00000018743	SNRNP35	66	51.205	Fukomys_damarensis
ENSEBUG00000003535	snrnp35	63	59.524	ENSGMOG00000002299	snrnp35	72	59.524	Gadus_morhua
ENSEBUG00000003535	snrnp35	63	61.905	ENSGALG00000003318	SNRNP35	64	61.905	Gallus_gallus
ENSEBUG00000003535	snrnp35	62	61.446	ENSGACG00000020631	snrnp35	100	47.328	Gasterosteus_aculeatus
ENSEBUG00000003535	snrnp35	64	59.064	ENSGGOG00000015936	SNRNP35	67	60.479	Gorilla_gorilla
ENSEBUG00000003535	snrnp35	62	63.855	ENSHBUG00000015853	snrnp35	79	63.095	Haplochromis_burtoni
ENSEBUG00000003535	snrnp35	62	61.446	ENSHGLG00000017961	SNRNP35	67	61.446	Heterocephalus_glaber_female
ENSEBUG00000003535	snrnp35	62	61.446	ENSHGLG00100019252	SNRNP35	67	61.446	Heterocephalus_glaber_male
ENSEBUG00000003535	snrnp35	64	59.412	ENSIPUG00000016053	snrnp35	64	59.412	Ictalurus_punctatus
ENSEBUG00000003535	snrnp35	64	60.588	ENSSTOG00000025145	SNRNP35	93	48.659	Ictidomys_tridecemlineatus
ENSEBUG00000003535	snrnp35	84	48.302	ENSJJAG00000013421	Snrnp35	66	60.119	Jaculus_jaculus
ENSEBUG00000003535	snrnp35	98	46.763	ENSLACG00000017176	SNRNP35	96	46.067	Latimeria_chalumnae
ENSEBUG00000003535	snrnp35	62	61.446	ENSLOCG00000018154	snrnp35	99	48.905	Lepisosteus_oculatus
ENSEBUG00000003535	snrnp35	62	60.843	ENSLAFG00000022302	SNRNP35	67	60.843	Loxodonta_africana
ENSEBUG00000003535	snrnp35	63	60.479	ENSMFAG00000008986	SNRNP35	68	60.479	Macaca_fascicularis
ENSEBUG00000003535	snrnp35	63	60.479	ENSMMUG00000008411	SNRNP35	68	60.479	Macaca_mulatta
ENSEBUG00000003535	snrnp35	63	60.479	ENSMNEG00000018139	SNRNP35	68	60.479	Macaca_nemestrina
ENSEBUG00000003535	snrnp35	63	60.479	ENSMLEG00000040998	SNRNP35	67	60.479	Mandrillus_leucophaeus
ENSEBUG00000003535	snrnp35	61	63.804	ENSMAMG00000018927	snrnp35	70	63.030	Mastacembelus_armatus
ENSEBUG00000003535	snrnp35	61	58.642	ENSMZEG00005018947	-	77	58.642	Maylandia_zebra
ENSEBUG00000003535	snrnp35	62	63.855	ENSMZEG00005018928	snrnp35	79	63.855	Maylandia_zebra
ENSEBUG00000003535	snrnp35	63	60.714	ENSMGAG00000003241	SNRNP35	69	60.714	Meleagris_gallopavo
ENSEBUG00000003535	snrnp35	62	60.241	ENSMAUG00000001690	Snrnp35	67	60.241	Mesocricetus_auratus
ENSEBUG00000003535	snrnp35	64	59.302	ENSMICG00000026512	SNRNP35	67	60.479	Microcebus_murinus
ENSEBUG00000003535	snrnp35	62	60.241	ENSMOCG00000000548	Snrnp35	69	58.824	Microtus_ochrogaster
ENSEBUG00000003535	snrnp35	69	58.511	ENSMMOG00000018779	snrnp35	78	58.696	Mola_mola
ENSEBUG00000003535	snrnp35	62	62.048	ENSMODG00000012481	SNRNP35	93	62.048	Monodelphis_domestica
ENSEBUG00000003535	snrnp35	64	58.824	MGP_CAROLIEiJ_G0027752	Snrnp35	98	51.695	Mus_caroli
ENSEBUG00000003535	snrnp35	62	60.241	ENSMUSG00000029402	Snrnp35	98	51.695	Mus_musculus
ENSEBUG00000003535	snrnp35	62	59.639	MGP_PahariEiJ_G0024332	Snrnp35	98	51.695	Mus_pahari
ENSEBUG00000003535	snrnp35	62	60.241	MGP_SPRETEiJ_G0028751	Snrnp35	98	51.695	Mus_spretus
ENSEBUG00000003535	snrnp35	62	60.241	ENSMPUG00000019392	SNRNP35	68	59.524	Mustela_putorius_furo
ENSEBUG00000003535	snrnp35	62	60.241	ENSMLUG00000025311	SNRNP35	68	59.524	Myotis_lucifugus
ENSEBUG00000003535	snrnp35	64	59.412	ENSNGAG00000010711	Snrnp35	67	60.843	Nannospalax_galili
ENSEBUG00000003535	snrnp35	64	59.064	ENSNLEG00000029859	SNRNP35	67	60.479	Nomascus_leucogenys
ENSEBUG00000003535	snrnp35	64	60.819	ENSOPRG00000011119	SNRNP35	70	60.819	Ochotona_princeps
ENSEBUG00000003535	snrnp35	62	62.048	ENSODEG00000019870	SNRNP35	67	62.048	Octodon_degus
ENSEBUG00000003535	snrnp35	63	63.095	ENSONIG00000021361	snrnp35	99	47.925	Oreochromis_niloticus
ENSEBUG00000003535	snrnp35	62	62.048	ENSOANG00000002697	SNRNP35	69	61.310	Ornithorhynchus_anatinus
ENSEBUG00000003535	snrnp35	62	62.048	ENSOCUG00000021248	SNRNP35	67	62.048	Oryctolagus_cuniculus
ENSEBUG00000003535	snrnp35	74	53.465	ENSORLG00000005673	snrnp35	86	55.978	Oryzias_latipes
ENSEBUG00000003535	snrnp35	67	55.676	ENSORLG00015014439	snrnp35	90	55.978	Oryzias_latipes_hsok
ENSEBUG00000003535	snrnp35	64	59.412	ENSOGAG00000011301	SNRNP35	69	59.412	Otolemur_garnettii
ENSEBUG00000003535	snrnp35	62	60.843	ENSOARG00000004583	SNRNP35	68	60.843	Ovis_aries
ENSEBUG00000003535	snrnp35	64	59.064	ENSPPAG00000000480	SNRNP35	67	60.479	Pan_paniscus
ENSEBUG00000003535	snrnp35	63	60.479	ENSPPRG00000013139	SNRNP35	67	60.479	Panthera_pardus
ENSEBUG00000003535	snrnp35	62	60.843	ENSPTIG00000015832	SNRNP35	67	60.119	Panthera_tigris_altaica
ENSEBUG00000003535	snrnp35	64	59.064	ENSPTRG00000023573	SNRNP35	67	60.479	Pan_troglodytes
ENSEBUG00000003535	snrnp35	63	60.479	ENSPANG00000019739	SNRNP35	67	60.479	Papio_anubis
ENSEBUG00000003535	snrnp35	64	59.064	ENSPKIG00000005221	snrnp35	82	59.064	Paramormyrops_kingsleyae
ENSEBUG00000003535	snrnp35	64	61.176	ENSPSIG00000000450	SNRNP35	63	61.176	Pelodiscus_sinensis
ENSEBUG00000003535	snrnp35	81	54.128	ENSPCIG00000010978	SNRNP35	64	61.905	Phascolarctos_cinereus
ENSEBUG00000003535	snrnp35	62	63.855	ENSPFOG00000019881	snrnp35	76	63.095	Poecilia_formosa
ENSEBUG00000003535	snrnp35	64	59.064	ENSPPYG00000005088	SNRNP35	67	60.479	Pongo_abelii
ENSEBUG00000003535	snrnp35	62	60.843	ENSPCAG00000011478	SNRNP35	67	60.843	Procavia_capensis
ENSEBUG00000003535	snrnp35	64	59.064	ENSPCOG00000009946	SNRNP35	69	59.064	Propithecus_coquereli
ENSEBUG00000003535	snrnp35	64	58.480	ENSPVAG00000015317	SNRNP35	68	59.880	Pteropus_vampyrus
ENSEBUG00000003535	snrnp35	78	53.623	ENSPNAG00000020589	snrnp35	66	59.172	Pygocentrus_nattereri
ENSEBUG00000003535	snrnp35	62	60.241	ENSRNOG00000001060	Snrnp35	69	59.524	Rattus_norvegicus
ENSEBUG00000003535	snrnp35	64	59.064	ENSRBIG00000043111	SNRNP35	67	60.479	Rhinopithecus_bieti
ENSEBUG00000003535	snrnp35	64	59.064	ENSRROG00000032878	SNRNP35	67	60.479	Rhinopithecus_roxellana
ENSEBUG00000003535	snrnp35	64	59.649	ENSSBOG00000012231	SNRNP35	68	59.649	Saimiri_boliviensis_boliviensis
ENSEBUG00000003535	snrnp35	81	52.752	ENSSHAG00000015558	-	69	60.119	Sarcophilus_harrisii
ENSEBUG00000003535	snrnp35	72	57.216	ENSSHAG00000001216	-	69	61.905	Sarcophilus_harrisii
ENSEBUG00000003535	snrnp35	62	60.843	ENSSFOG00015003785	snrnp35	89	60.843	Scleropages_formosus
ENSEBUG00000003535	snrnp35	61	63.804	ENSSLDG00000017209	snrnp35	77	63.804	Seriola_lalandi_dorsalis
ENSEBUG00000003535	snrnp35	62	60.843	ENSSARG00000012656	SNRNP35	74	58.333	Sorex_araneus
ENSEBUG00000003535	snrnp35	64	60.588	ENSSPUG00000012768	SNRNP35	63	61.310	Sphenodon_punctatus
ENSEBUG00000003535	snrnp35	61	64.417	ENSSPAG00000008207	snrnp35	76	64.417	Stegastes_partitus
ENSEBUG00000003535	snrnp35	62	60.241	ENSSSCG00000022212	SNRNP35	77	60.241	Sus_scrofa
ENSEBUG00000003535	snrnp35	63	61.310	ENSTGUG00000005364	-	70	61.310	Taeniopygia_guttata
ENSEBUG00000003535	snrnp35	61	62.195	ENSTGUG00000015471	-	62	62.195	Taeniopygia_guttata
ENSEBUG00000003535	snrnp35	67	61.111	ENSTNIG00000009984	snrnp35	79	64.242	Tetraodon_nigroviridis
ENSEBUG00000003535	snrnp35	64	59.412	ENSTBEG00000002309	SNRNP35	68	60.119	Tupaia_belangeri
ENSEBUG00000003535	snrnp35	62	60.241	ENSUAMG00000012611	SNRNP35	68	59.524	Ursus_americanus
ENSEBUG00000003535	snrnp35	63	59.524	ENSUMAG00000003914	SNRNP35	67	58.824	Ursus_maritimus
ENSEBUG00000003535	snrnp35	62	60.241	ENSVVUG00000027761	-	67	60.241	Vulpes_vulpes
ENSEBUG00000003535	snrnp35	62	63.855	ENSXMAG00000019885	snrnp35	67	63.095	Xiphophorus_maculatus