EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 20689 bases
Position: chrFYBX02009556.1:1043550-1064238
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005191	zf-C2H2	PF00096.26	1.6e-18	1	5
ENSEBUP00000005191	zf-C2H2	PF00096.26	1.6e-18	2	5
ENSEBUP00000005191	zf-C2H2	PF00096.26	1.6e-18	3	5
ENSEBUP00000005191	zf-C2H2	PF00096.26	1.6e-18	4	5
ENSEBUP00000005191	zf-C2H2	PF00096.26	1.6e-18	5	5
ENSEBUP00000005191	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005629	-	5085	-	ENSEBUP00000005191	282 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003573	-	58	47.222	ENSEBUG00000005816	-	58	47.222
ENSEBUG00000003573	-	99	53.846	ENSEBUG00000012823	-	91	53.846
ENSEBUG00000003573	-	55	53.642	ENSEBUG00000001525	-	84	53.642
ENSEBUG00000003573	-	98	52.532	ENSEBUG00000005703	-	97	52.532
ENSEBUG00000003573	-	77	54.839	ENSEBUG00000005258	-	97	58.182
ENSEBUG00000003573	-	98	54.902	ENSEBUG00000009208	-	77	54.902
ENSEBUG00000003573	-	98	52.903	ENSEBUG00000009291	-	92	52.903
ENSEBUG00000003573	-	71	55.634	ENSEBUG00000008157	-	98	55.634
ENSEBUG00000003573	-	70	51.587	ENSEBUG00000015661	-	70	51.587
ENSEBUG00000003573	-	56	47.742	ENSEBUG00000014042	-	53	47.742
ENSEBUG00000003573	-	90	65.882	ENSEBUG00000001826	-	87	65.882
ENSEBUG00000003573	-	98	46.316	ENSEBUG00000008324	-	93	46.316
ENSEBUG00000003573	-	57	48.447	ENSEBUG00000003236	-	92	48.734
ENSEBUG00000003573	-	88	38.686	ENSEBUG00000000860	-	51	38.686
ENSEBUG00000003573	-	77	50.679	ENSEBUG00000001698	-	98	50.679
ENSEBUG00000003573	-	66	45.690	ENSEBUG00000013875	-	77	46.207
ENSEBUG00000003573	-	98	51.899	ENSEBUG00000003455	-	93	51.899
ENSEBUG00000003573	-	94	48.344	ENSEBUG00000002606	-	91	48.344
ENSEBUG00000003573	-	61	51.852	ENSEBUG00000010952	-	85	51.852
ENSEBUG00000003573	-	72	51.634	ENSEBUG00000014717	-	76	51.634
ENSEBUG00000003573	-	89	42.857	ENSEBUG00000000967	-	60	42.857
ENSEBUG00000003573	-	59	46.970	ENSEBUG00000013126	-	56	46.970
ENSEBUG00000003573	-	100	59.859	ENSEBUG00000011244	-	99	59.859
ENSEBUG00000003573	-	98	56.081	ENSEBUG00000002589	-	99	56.081
ENSEBUG00000003573	-	65	47.742	ENSEBUG00000015073	-	81	50.641
ENSEBUG00000003573	-	64	55.556	ENSEBUG00000006249	-	89	55.556
ENSEBUG00000003573	-	99	45.752	ENSEBUG00000014542	-	91	45.752
ENSEBUG00000003573	-	100	59.459	ENSEBUG00000011479	-	95	59.459
ENSEBUG00000003573	-	56	53.279	ENSEBUG00000005722	-	85	53.279
ENSEBUG00000003573	-	98	62.000	ENSEBUG00000012628	ZNF845	94	62.000
ENSEBUG00000003573	-	56	57.895	ENSEBUG00000002960	-	61	57.895
ENSEBUG00000003573	-	98	57.556	ENSEBUG00000015837	-	94	60.284
ENSEBUG00000003573	-	64	54.717	ENSEBUG00000008903	-	76	54.717
ENSEBUG00000003573	-	81	53.731	ENSEBUG00000016878	-	98	51.493
ENSEBUG00000003573	-	98	57.143	ENSEBUG00000007308	ZNF845	99	57.143
ENSEBUG00000003573	-	71	49.664	ENSEBUG00000007305	-	89	49.664
ENSEBUG00000003573	-	97	43.333	ENSEBUG00000005200	-	56	43.333
ENSEBUG00000003573	-	99	47.826	ENSEBUG00000012314	-	50	49.677
ENSEBUG00000003573	-	98	33.942	ENSEBUG00000005913	-	72	33.942
ENSEBUG00000003573	-	98	53.846	ENSEBUG00000008852	ZNF845	87	53.846
ENSEBUG00000003573	-	61	54.248	ENSEBUG00000008107	-	98	54.248
ENSEBUG00000003573	-	71	48.201	ENSEBUG00000008792	-	91	48.201
ENSEBUG00000003573	-	74	57.265	ENSEBUG00000002537	-	87	57.265
ENSEBUG00000003573	-	99	54.487	ENSEBUG00000014648	-	88	54.487
ENSEBUG00000003573	-	91	50.442	ENSEBUG00000015155	-	87	50.442
ENSEBUG00000003573	-	98	53.846	ENSEBUG00000012748	-	91	53.846
ENSEBUG00000003573	-	99	66.547	ENSEBUG00000010472	-	93	64.029
ENSEBUG00000003573	-	90	41.259	ENSEBUG00000002721	-	53	43.860
ENSEBUG00000003573	-	97	42.391	ENSEBUG00000013577	-	89	40.000
ENSEBUG00000003573	-	99	54.545	ENSEBUG00000005012	-	79	54.545
ENSEBUG00000003573	-	98	53.797	ENSEBUG00000009909	-	93	53.797
ENSEBUG00000003573	-	93	37.970	ENSEBUG00000016292	-	54	42.353
ENSEBUG00000003573	-	98	56.774	ENSEBUG00000014739	-	91	56.774
ENSEBUG00000003573	-	64	51.282	ENSEBUG00000006080	-	88	51.282
ENSEBUG00000003573	-	99	58.667	ENSEBUG00000008988	ZNF845	99	60.305
ENSEBUG00000003573	-	71	50.562	ENSEBUG00000012454	-	95	50.000
ENSEBUG00000003573	-	99	60.000	ENSEBUG00000005655	-	92	60.000
ENSEBUG00000003573	-	98	54.054	ENSEBUG00000001972	-	86	54.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003573	-	55	46.377	ENSAPOG00000004878	-	83	46.377	Acanthochromis_polyacanthus
ENSEBUG00000003573	-	55	49.206	ENSAPEG00000009099	-	83	49.206	Amphiprion_percula
ENSEBUG00000003573	-	51	47.059	ENSAPEG00000012583	-	99	47.059	Amphiprion_percula
ENSEBUG00000003573	-	56	46.711	ENSACLG00000023305	-	73	46.711	Astatotilapia_calliptera
ENSEBUG00000003573	-	55	41.176	ENSACLG00000027692	-	71	41.176	Astatotilapia_calliptera
ENSEBUG00000003573	-	95	36.078	ENSACLG00000017321	-	52	42.000	Astatotilapia_calliptera
ENSEBUG00000003573	-	70	49.020	ENSAMXG00000042774	-	85	49.020	Astyanax_mexicanus
ENSEBUG00000003573	-	55	51.282	ENSAMXG00000030963	-	51	51.282	Astyanax_mexicanus
ENSEBUG00000003573	-	71	43.046	ENSAMXG00000034333	-	52	47.887	Astyanax_mexicanus
ENSEBUG00000003573	-	57	43.750	ENSAMXG00000043178	-	65	43.750	Astyanax_mexicanus
ENSEBUG00000003573	-	65	48.148	ENSAMXG00000042167	-	91	48.837	Astyanax_mexicanus
ENSEBUG00000003573	-	66	45.763	ENSCHOG00000008899	-	100	45.763	Choloepus_hoffmanni
ENSEBUG00000003573	-	58	41.611	ENSCING00000015714	-	67	41.611	Ciona_intestinalis
ENSEBUG00000003573	-	55	44.186	ENSCSAVG00000003690	-	99	44.186	Ciona_savignyi
ENSEBUG00000003573	-	58	45.070	ENSCSAVG00000004762	-	100	45.070	Ciona_savignyi
ENSEBUG00000003573	-	58	47.407	ENSCSAVG00000001830	-	99	47.407	Ciona_savignyi
ENSEBUG00000003573	-	54	45.455	ENSELUG00000010279	-	77	45.455	Esox_lucius
ENSEBUG00000003573	-	53	47.244	ENSFDAG00000006075	-	100	47.244	Fukomys_damarensis
ENSEBUG00000003573	-	71	45.600	ENSGAGG00000013021	-	87	45.600	Gopherus_agassizii
ENSEBUG00000003573	-	70	50.000	ENSHBUG00000015942	-	95	50.450	Haplochromis_burtoni
ENSEBUG00000003573	-	75	46.875	ENSIPUG00000012960	-	96	45.161	Ictalurus_punctatus
ENSEBUG00000003573	-	72	42.593	ENSLBEG00000001920	-	92	43.750	Labrus_bergylta
ENSEBUG00000003573	-	55	44.681	ENSMZEG00005004072	-	66	44.681	Maylandia_zebra
ENSEBUG00000003573	-	55	48.031	ENSNGAG00000024130	-	98	48.031	Nannospalax_galili
ENSEBUG00000003573	-	72	43.871	ENSORLG00000026568	-	54	43.871	Oryzias_latipes
ENSEBUG00000003573	-	72	44.720	ENSORLG00020016666	-	63	44.720	Oryzias_latipes_hni
ENSEBUG00000003573	-	56	46.957	ENSORLG00015013935	-	85	46.957	Oryzias_latipes_hsok
ENSEBUG00000003573	-	99	47.059	ENSOMEG00000002268	-	68	41.209	Oryzias_melastigma
ENSEBUG00000003573	-	71	45.033	ENSPSIG00000001739	-	99	45.033	Pelodiscus_sinensis
ENSEBUG00000003573	-	55	40.157	ENSPMAG00000008196	-	100	40.157	Petromyzon_marinus
ENSEBUG00000003573	-	55	39.844	ENSPMAG00000008879	-	100	39.844	Petromyzon_marinus
ENSEBUG00000003573	-	84	41.489	ENSPNYG00000011987	-	80	35.507	Pundamilia_nyererei
ENSEBUG00000003573	-	56	50.000	ENSSMAG00000009679	-	77	50.000	Scophthalmus_maximus
ENSEBUG00000003573	-	56	51.807	ENSSDUG00000000786	-	93	51.807	Seriola_dumerili
ENSEBUG00000003573	-	55	44.898	ENSSPAG00000001478	-	51	42.568	Stegastes_partitus