EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 11590 bases
Position: chrFYBX02010656.1:2970191-2981780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005228	RRM_5	PF13893.6	5.4e-07	1	1
ENSEBUP00000005228	RRM_1	PF00076.22	4.3e-16	1	2
ENSEBUP00000005228	RRM_1	PF00076.22	4.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005666	-	708	-	ENSEBUP00000005228	235 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003580	-	66	70.323	ENSEBUG00000002973	-	72	70.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003580	-	91	67.442	ENSG00000104824	HNRNPL	92	70.909	Homo_sapiens
ENSEBUG00000003580	-	75	43.878	ENSG00000011304	PTBP1	54	30.000	Homo_sapiens
ENSEBUG00000003580	-	88	58.937	ENSG00000143889	HNRNPLL	95	58.937	Homo_sapiens
ENSEBUG00000003580	-	88	63.981	ENSACIG00000004909	hnrnpl	58	55.556	Amphilophus_citrinellus
ENSEBUG00000003580	-	86	57.426	ENSAOCG00000024299	-	76	57.426	Amphiprion_ocellaris
ENSEBUG00000003580	-	88	58.454	ENSANAG00000034951	HNRNPLL	71	59.799	Aotus_nancymaae
ENSEBUG00000003580	-	81	30.357	ENSANAG00000021256	-	50	30.357	Aotus_nancymaae
ENSEBUG00000003580	-	92	58.065	ENSANAG00000027695	-	68	58.571	Aotus_nancymaae
ENSEBUG00000003580	-	81	30.357	ENSANAG00000020883	-	66	30.357	Aotus_nancymaae
ENSEBUG00000003580	-	91	59.535	ENSAMXG00000007014	-	81	59.535	Astyanax_mexicanus
ENSEBUG00000003580	-	81	31.416	ENSBTAG00000045828	PTBP1	50	30.804	Bos_taurus
ENSEBUG00000003580	-	86	47.059	WBGene00016624	C44B7.2	60	47.059	Caenorhabditis_elegans
ENSEBUG00000003580	-	89	68.571	ENSCJAG00000013931	-	74	66.346	Callithrix_jacchus
ENSEBUG00000003580	-	88	57.005	ENSCJAG00000004088	HNRNPLL	70	58.291	Callithrix_jacchus
ENSEBUG00000003580	-	86	59.901	ENSCAFG00020022813	HNRNPLL	67	60.302	Canis_lupus_dingo
ENSEBUG00000003580	-	89	66.038	ENSCAFG00020017321	-	67	66.667	Canis_lupus_dingo
ENSEBUG00000003580	-	88	31.513	ENSCHIG00000024922	PTBP2	73	31.513	Capra_hircus
ENSEBUG00000003580	-	94	57.018	ENSCPOG00000007588	HNRNPLL	71	60.302	Cavia_porcellus
ENSEBUG00000003580	-	81	30.137	ENSCCAG00000036365	-	68	30.137	Cebus_capucinus
ENSEBUG00000003580	-	88	31.933	ENSCCAG00000026345	PTBP2	77	31.933	Cebus_capucinus
ENSEBUG00000003580	-	88	58.937	ENSCCAG00000028404	HNRNPLL	71	60.302	Cebus_capucinus
ENSEBUG00000003580	-	88	58.937	ENSCATG00000023374	HNRNPLL	71	60.302	Cercocebus_atys
ENSEBUG00000003580	-	52	65.854	ENSCING00000001244	-	84	61.940	Ciona_intestinalis
ENSEBUG00000003580	-	80	34.804	ENSCSAVG00000007421	-	52	34.804	Ciona_savignyi
ENSEBUG00000003580	-	88	58.937	ENSCANG00000033628	HNRNPLL	71	60.302	Colobus_angolensis_palliatus
ENSEBUG00000003580	-	80	31.390	ENSCANG00000042399	-	74	31.390	Colobus_angolensis_palliatus
ENSEBUG00000003580	-	75	43.878	ENSCANG00000038259	PTBP1	74	30.804	Colobus_angolensis_palliatus
ENSEBUG00000003580	-	87	67.961	ENSDARG00000035324	hnrnpl	74	68.137	Danio_rerio
ENSEBUG00000003580	-	84	43.939	ENSDARG00000116101	CABZ01100304.1	79	43.939	Danio_rerio
ENSEBUG00000003580	-	88	31.933	ENSDNOG00000017687	PTBP2	75	31.092	Dasypus_novemcinctus
ENSEBUG00000003580	-	88	58.937	ENSDORG00000008609	Hnrnpll	70	60.302	Dipodomys_ordii
ENSEBUG00000003580	-	81	30.531	ENSEASG00005002596	-	63	30.357	Equus_asinus_asinus
ENSEBUG00000003580	-	81	31.416	ENSEASG00005021525	-	63	30.804	Equus_asinus_asinus
ENSEBUG00000003580	-	88	31.933	ENSECAG00000015783	PTBP2	66	31.933	Equus_caballus
ENSEBUG00000003580	-	85	59.500	ENSECAG00000018354	HNRNPLL	68	60.302	Equus_caballus
ENSEBUG00000003580	-	88	31.933	ENSFCAG00000027655	PTBP2	67	31.933	Felis_catus
ENSEBUG00000003580	-	73	68.023	ENSFHEG00000017940	-	84	69.231	Fundulus_heteroclitus
ENSEBUG00000003580	-	71	69.643	ENSFHEG00000017462	-	92	69.643	Fundulus_heteroclitus
ENSEBUG00000003580	-	89	67.464	ENSGALG00000043929	-	68	68.137	Gallus_gallus
ENSEBUG00000003580	-	70	71.515	ENSGAGG00000008378	-	92	71.515	Gopherus_agassizii
ENSEBUG00000003580	-	88	58.937	ENSGGOG00000003456	HNRNPLL	71	60.302	Gorilla_gorilla
ENSEBUG00000003580	-	89	56.872	ENSHBUG00000003120	HNRNPLL	78	56.731	Haplochromis_burtoni
ENSEBUG00000003580	-	93	63.182	ENSHCOG00000016116	hnrnpl2	54	58.947	Hippocampus_comes
ENSEBUG00000003580	-	88	58.173	ENSJJAG00000024192	Hnrnpll	69	59.500	Jaculus_jaculus
ENSEBUG00000003580	-	90	64.486	ENSLAFG00000025536	HNRNPL	87	64.286	Loxodonta_africana
ENSEBUG00000003580	-	88	58.937	ENSMMUG00000002338	HNRNPLL	71	60.302	Macaca_mulatta
ENSEBUG00000003580	-	89	68.571	ENSMNEG00000039542	-	92	68.072	Macaca_nemestrina
ENSEBUG00000003580	-	81	31.416	ENSMNEG00000028851	PTBP1	78	30.804	Macaca_nemestrina
ENSEBUG00000003580	-	88	58.937	ENSMLEG00000031558	HNRNPLL	71	60.302	Mandrillus_leucophaeus
ENSEBUG00000003580	-	75	43.878	ENSMLEG00000013865	PTBP1	74	31.250	Mandrillus_leucophaeus
ENSEBUG00000003580	-	88	31.092	ENSMGAG00000007308	PTBP2	54	42.857	Meleagris_gallopavo
ENSEBUG00000003580	-	88	58.937	ENSMICG00000013155	HNRNPLL	72	60.302	Microcebus_murinus
ENSEBUG00000003580	-	75	43.878	ENSMICG00000007131	PTBP1	70	30.804	Microcebus_murinus
ENSEBUG00000003580	-	81	31.858	ENSMOCG00000007495	Ptbp1	63	31.250	Microtus_ochrogaster
ENSEBUG00000003580	-	91	55.607	ENSMMOG00000018608	HNRNPLL	70	58.462	Mola_mola
ENSEBUG00000003580	-	88	31.092	MGP_CAROLIEiJ_G0025581	Ptbp2	67	31.092	Mus_caroli
ENSEBUG00000003580	-	81	31.858	MGP_CAROLIEiJ_G0015545	Ptbp1	63	31.250	Mus_caroli
ENSEBUG00000003580	-	94	57.014	MGP_CAROLIEiJ_G0021900	Hnrnpll	58	60.302	Mus_caroli
ENSEBUG00000003580	-	81	30.045	MGP_CAROLIEiJ_G0026063	Ptbp3	66	39.175	Mus_caroli
ENSEBUG00000003580	-	89	68.571	MGP_CAROLIEiJ_G0029463	Hnrnpl	100	66.964	Mus_caroli
ENSEBUG00000003580	-	81	31.858	ENSMUSG00000006498	Ptbp1	63	31.250	Mus_musculus
ENSEBUG00000003580	-	81	30.045	ENSMUSG00000028382	Ptbp3	66	39.175	Mus_musculus
ENSEBUG00000003580	-	89	68.571	ENSMUSG00000015165	Hnrnpl	100	66.964	Mus_musculus
ENSEBUG00000003580	-	94	57.014	ENSMUSG00000024095	Hnrnpll	60	60.302	Mus_musculus
ENSEBUG00000003580	-	88	31.092	ENSMUSG00000028134	Ptbp2	67	31.092	Mus_musculus
ENSEBUG00000003580	-	89	68.571	MGP_PahariEiJ_G0012697	Hnrnpl	100	66.964	Mus_pahari
ENSEBUG00000003580	-	94	57.014	MGP_PahariEiJ_G0020889	Hnrnpll	59	60.302	Mus_pahari
ENSEBUG00000003580	-	81	31.858	MGP_PahariEiJ_G0030958	Ptbp1	63	31.250	Mus_pahari
ENSEBUG00000003580	-	88	31.092	MGP_PahariEiJ_G0027027	Ptbp2	67	31.092	Mus_pahari
ENSEBUG00000003580	-	81	30.045	MGP_PahariEiJ_G0028401	Ptbp3	66	39.175	Mus_pahari
ENSEBUG00000003580	-	89	68.571	MGP_SPRETEiJ_G0030559	Hnrnpl	100	66.964	Mus_spretus
ENSEBUG00000003580	-	88	31.092	MGP_SPRETEiJ_G0026532	Ptbp2	67	31.092	Mus_spretus
ENSEBUG00000003580	-	81	30.045	MGP_SPRETEiJ_G0027028	Ptbp3	66	39.175	Mus_spretus
ENSEBUG00000003580	-	94	57.014	MGP_SPRETEiJ_G0022815	Hnrnpll	60	60.302	Mus_spretus
ENSEBUG00000003580	-	69	62.805	ENSNBRG00000024244	HNRNPLL	97	62.805	Neolamprologus_brichardi
ENSEBUG00000003580	-	89	49.296	ENSODEG00000012905	-	53	49.296	Octodon_degus
ENSEBUG00000003580	-	81	32.075	ENSORLG00020001452	PTBP1	59	32.547	Oryzias_latipes_hni
ENSEBUG00000003580	-	81	32.075	ENSORLG00015020649	PTBP1	59	32.547	Oryzias_latipes_hsok
ENSEBUG00000003580	-	52	58.065	ENSOMEG00000012688	-	80	58.824	Oryzias_melastigma
ENSEBUG00000003580	-	88	31.933	ENSPTIG00000018047	PTBP2	72	31.933	Panthera_tigris_altaica
ENSEBUG00000003580	-	81	33.333	ENSPTIG00000012325	-	68	33.333	Panthera_tigris_altaica
ENSEBUG00000003580	-	88	58.937	ENSPANG00000015805	HNRNPLL	71	60.302	Papio_anubis
ENSEBUG00000003580	-	81	32.579	ENSPMAG00000005883	ptbp2a	85	32.599	Petromyzon_marinus
ENSEBUG00000003580	-	89	69.048	ENSPCIG00000010541	-	60	69.756	Phascolarctos_cinereus
ENSEBUG00000003580	-	88	57.619	ENSPCIG00000020489	HNRNPLL	63	58.911	Phascolarctos_cinereus
ENSEBUG00000003580	-	90	34.599	ENSPREG00000015110	-	62	34.703	Poecilia_reticulata
ENSEBUG00000003580	-	88	31.092	ENSPCAG00000010292	PTBP2	83	31.933	Procavia_capensis
ENSEBUG00000003580	-	88	57.005	ENSPCOG00000025638	HNRNPLL	69	58.291	Propithecus_coquereli
ENSEBUG00000003580	-	88	31.933	ENSPVAG00000011545	PTBP2	57	31.933	Pteropus_vampyrus
ENSEBUG00000003580	-	87	34.211	ENSPNYG00000005088	-	70	34.562	Pundamilia_nyererei
ENSEBUG00000003580	-	69	62.805	ENSPNYG00000009070	-	97	62.805	Pundamilia_nyererei
ENSEBUG00000003580	-	74	31.461	ENSRBIG00000026293	-	57	31.461	Rhinopithecus_bieti
ENSEBUG00000003580	-	81	31.416	ENSRBIG00000044228	PTBP1	74	30.804	Rhinopithecus_bieti
ENSEBUG00000003580	-	93	31.765	ENSRBIG00000031850	PTBP2	70	31.933	Rhinopithecus_bieti
ENSEBUG00000003580	-	81	31.416	ENSRROG00000016534	PTBP1	74	30.804	Rhinopithecus_roxellana
ENSEBUG00000003580	-	88	58.937	ENSSBOG00000025720	HNRNPLL	71	60.302	Saimiri_boliviensis_boliviensis
ENSEBUG00000003580	-	95	53.982	ENSSLDG00000017942	-	79	55.204	Seriola_lalandi_dorsalis
ENSEBUG00000003580	-	91	54.419	ENSSPAG00000020833	-	84	57.282	Stegastes_partitus
ENSEBUG00000003580	-	60	31.977	ENSSPAG00000008948	ptbp3	51	31.977	Stegastes_partitus
ENSEBUG00000003580	-	90	67.606	ENSSSCG00000035570	-	76	67.606	Sus_scrofa
ENSEBUG00000003580	-	88	31.933	ENSSSCG00000006879	PTBP2	67	31.933	Sus_scrofa
ENSEBUG00000003580	-	86	59.901	ENSSSCG00000020878	HNRNPLL	68	60.302	Sus_scrofa
ENSEBUG00000003580	-	77	60.773	ENSTRUG00000000830	-	75	60.773	Takifugu_rubripes
ENSEBUG00000003580	-	88	31.092	ENSTBEG00000010797	-	80	31.933	Tupaia_belangeri
ENSEBUG00000003580	-	94	56.951	ENSUAMG00000024895	HNRNPLL	67	59.223	Ursus_americanus
ENSEBUG00000003580	-	88	31.933	ENSUMAG00000008920	PTBP2	73	31.933	Ursus_maritimus
ENSEBUG00000003580	-	81	31.019	ENSUMAG00000005280	-	61	32.870	Ursus_maritimus
ENSEBUG00000003580	-	94	56.054	ENSVVUG00000018784	HNRNPLL	67	60.302	Vulpes_vulpes
ENSEBUG00000003580	-	89	66.038	ENSVVUG00000006478	-	67	66.667	Vulpes_vulpes
ENSEBUG00000003580	-	90	31.727	ENSXCOG00000000276	ptbp1a	52	32.143	Xiphophorus_couchianus
ENSEBUG00000003580	-	88	64.115	ENSXCOG00000009196	hnrnpl2	66	51.852	Xiphophorus_couchianus
ENSEBUG00000003580	-	92	52.727	ENSXCOG00000011252	-	61	51.724	Xiphophorus_couchianus