EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 5342 bases
Position: chrFYBX02007591.1:259045-264386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005359	LSM	PF01423.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005797	-	456	-	ENSEBUP00000005359	151 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003639	-	50	93.333	ENSG00000130520	LSM4	99	72.059	Homo_sapiens
ENSEBUG00000003639	-	64	77.083	ENSAPOG00000005643	lsm4	50	93.333	Acanthochromis_polyacanthus
ENSEBUG00000003639	-	64	77.083	ENSAOCG00000006414	lsm4	51	93.333	Amphiprion_ocellaris
ENSEBUG00000003639	-	64	77.083	ENSAPEG00000006238	lsm4	50	93.333	Amphiprion_percula
ENSEBUG00000003639	-	53	88.750	ENSANAG00000034659	LSM4	54	93.333	Aotus_nancymaae
ENSEBUG00000003639	-	84	68.504	ENSACLG00000022738	lsm4	51	93.333	Astatotilapia_calliptera
ENSEBUG00000003639	-	63	80.000	ENSAMXG00000016932	lsm4	53	93.333	Astyanax_mexicanus
ENSEBUG00000003639	-	53	88.750	ENSBTAG00000008578	LSM4	54	93.333	Bos_taurus
ENSEBUG00000003639	-	57	68.605	WBGene00003078	lsm-4	70	68.605	Caenorhabditis_elegans
ENSEBUG00000003639	-	53	88.750	ENSCJAG00000014171	LSM4	54	93.333	Callithrix_jacchus
ENSEBUG00000003639	-	53	88.750	ENSCAFG00020012137	LSM4	54	93.333	Canis_lupus_dingo
ENSEBUG00000003639	-	52	88.608	ENSCHIG00000010928	LSM4	50	92.000	Capra_hircus
ENSEBUG00000003639	-	53	88.750	ENSTSYG00000030906	LSM4	54	93.333	Carlito_syrichta
ENSEBUG00000003639	-	50	93.333	ENSCAPG00000014140	LSM4	54	93.333	Cavia_aperea
ENSEBUG00000003639	-	50	93.333	ENSCPOG00000024117	LSM4	54	93.333	Cavia_porcellus
ENSEBUG00000003639	-	53	88.750	ENSCCAG00000036308	LSM4	54	93.333	Cebus_capucinus
ENSEBUG00000003639	-	53	88.750	ENSCATG00000029311	LSM4	99	70.588	Cercocebus_atys
ENSEBUG00000003639	-	53	88.750	ENSCLAG00000010828	LSM4	54	93.333	Chinchilla_lanigera
ENSEBUG00000003639	-	53	88.750	ENSCSAG00000005370	LSM4	54	93.333	Chlorocebus_sabaeus
ENSEBUG00000003639	-	53	88.750	ENSCPBG00000012925	LSM4	54	93.333	Chrysemys_picta_bellii
ENSEBUG00000003639	-	53	88.750	ENSCING00000007519	-	63	88.750	Ciona_intestinalis
ENSEBUG00000003639	-	53	88.750	ENSCSAVG00000008596	-	60	93.333	Ciona_savignyi
ENSEBUG00000003639	-	53	88.750	ENSCANG00000043686	LSM4	99	68.571	Colobus_angolensis_palliatus
ENSEBUG00000003639	-	50	93.333	ENSCGRG00001014436	Lsm4	54	93.333	Cricetulus_griseus_chok1gshd
ENSEBUG00000003639	-	66	76.768	ENSCSEG00000016127	lsm4	53	93.333	Cynoglossus_semilaevis
ENSEBUG00000003639	-	64	78.125	ENSCVAG00000010601	lsm4	52	93.333	Cyprinodon_variegatus
ENSEBUG00000003639	-	90	66.429	ENSDARG00000023852	lsm4	75	73.832	Danio_rerio
ENSEBUG00000003639	-	53	88.750	ENSDORG00000024225	Lsm4	54	93.333	Dipodomys_ordii
ENSEBUG00000003639	-	53	86.250	FBgn0032240	CG17768	52	86.250	Drosophila_melanogaster
ENSEBUG00000003639	-	62	78.723	ENSELUG00000012821	lsm4	56	93.243	Esox_lucius
ENSEBUG00000003639	-	53	88.750	ENSFCAG00000040580	LSM4	54	93.333	Felis_catus
ENSEBUG00000003639	-	52	88.608	ENSFALG00000009478	LSM4	54	92.000	Ficedula_albicollis
ENSEBUG00000003639	-	52	88.608	ENSFDAG00000010124	LSM4	54	93.243	Fukomys_damarensis
ENSEBUG00000003639	-	72	73.148	ENSGMOG00000007729	lsm4	50	93.243	Gadus_morhua
ENSEBUG00000003639	-	53	88.750	ENSGALG00000003385	LSM4	54	93.333	Gallus_gallus
ENSEBUG00000003639	-	63	78.947	ENSGACG00000008140	lsm4	50	93.333	Gasterosteus_aculeatus
ENSEBUG00000003639	-	53	88.750	ENSGAGG00000017812	LSM4	54	93.333	Gopherus_agassizii
ENSEBUG00000003639	-	50	93.333	ENSGGOG00000012914	-	99	70.588	Gorilla_gorilla
ENSEBUG00000003639	-	53	88.750	ENSHGLG00000006568	LSM4	58	88.750	Heterocephalus_glaber_female
ENSEBUG00000003639	-	63	78.947	ENSHGLG00100007894	LSM4	86	88.750	Heterocephalus_glaber_male
ENSEBUG00000003639	-	64	78.125	ENSHCOG00000008819	lsm4	56	88.750	Hippocampus_comes
ENSEBUG00000003639	-	63	78.947	ENSIPUG00000005368	Lsm4	53	93.333	Ictalurus_punctatus
ENSEBUG00000003639	-	53	88.750	ENSSTOG00000016494	LSM4	54	93.333	Ictidomys_tridecemlineatus
ENSEBUG00000003639	-	50	93.333	ENSJJAG00000017420	Lsm4	54	93.333	Jaculus_jaculus
ENSEBUG00000003639	-	53	88.750	ENSKMAG00000005073	lsm4	52	93.333	Kryptolebias_marmoratus
ENSEBUG00000003639	-	64	78.125	ENSLBEG00000027930	lsm4	50	93.333	Labrus_bergylta
ENSEBUG00000003639	-	53	88.750	ENSLACG00000015861	LSM4	54	93.333	Latimeria_chalumnae
ENSEBUG00000003639	-	63	78.947	ENSLOCG00000002025	lsm4	53	93.333	Lepisosteus_oculatus
ENSEBUG00000003639	-	52	88.608	ENSLAFG00000017459	LSM4	54	92.000	Loxodonta_africana
ENSEBUG00000003639	-	53	88.750	ENSMFAG00000031194	LSM4	99	68.571	Macaca_fascicularis
ENSEBUG00000003639	-	53	88.750	ENSMMUG00000004405	LSM4	54	93.333	Macaca_mulatta
ENSEBUG00000003639	-	53	88.750	ENSMNEG00000042899	LSM4	99	68.571	Macaca_nemestrina
ENSEBUG00000003639	-	53	88.750	ENSMLEG00000027948	LSM4	99	70.588	Mandrillus_leucophaeus
ENSEBUG00000003639	-	84	68.504	ENSMAMG00000006190	lsm4	53	93.333	Mastacembelus_armatus
ENSEBUG00000003639	-	84	68.504	ENSMZEG00005016420	lsm4	51	93.333	Maylandia_zebra
ENSEBUG00000003639	-	52	88.608	ENSMGAG00000004976	LSM4	54	92.000	Meleagris_gallopavo
ENSEBUG00000003639	-	63	78.947	ENSMICG00000000222	LSM4	54	93.333	Microcebus_murinus
ENSEBUG00000003639	-	50	93.333	ENSMOCG00000020861	Lsm4	54	93.333	Microtus_ochrogaster
ENSEBUG00000003639	-	63	78.947	ENSMALG00000018159	lsm4	56	88.750	Monopterus_albus
ENSEBUG00000003639	-	50	93.333	MGP_CAROLIEiJ_G0031158	Lsm4	54	93.333	Mus_caroli
ENSEBUG00000003639	-	50	93.333	ENSMUSG00000031848	Lsm4	72	85.333	Mus_musculus
ENSEBUG00000003639	-	50	93.333	MGP_PahariEiJ_G0021623	Lsm4	54	93.333	Mus_pahari
ENSEBUG00000003639	-	50	93.333	MGP_SPRETEiJ_G0032276	Lsm4	54	93.333	Mus_spretus
ENSEBUG00000003639	-	53	88.750	ENSMPUG00000015589	LSM4	54	93.333	Mustela_putorius_furo
ENSEBUG00000003639	-	50	93.333	ENSNGAG00000008644	Lsm4	54	93.333	Nannospalax_galili
ENSEBUG00000003639	-	53	76.250	ENSOPRG00000005575	LSM4	50	91.667	Ochotona_princeps
ENSEBUG00000003639	-	50	85.333	ENSODEG00000004519	-	56	85.333	Octodon_degus
ENSEBUG00000003639	-	53	88.750	ENSODEG00000020549	-	54	93.333	Octodon_degus
ENSEBUG00000003639	-	84	68.504	ENSONIG00000012724	lsm4	51	93.333	Oreochromis_niloticus
ENSEBUG00000003639	-	52	83.133	ENSOANG00000007434	LSM4	72	83.133	Ornithorhynchus_anatinus
ENSEBUG00000003639	-	84	68.504	ENSORLG00000008391	lsm4	52	93.333	Oryzias_latipes
ENSEBUG00000003639	-	84	68.504	ENSORLG00020014829	lsm4	52	93.333	Oryzias_latipes_hni
ENSEBUG00000003639	-	84	68.504	ENSORLG00015010205	lsm4	52	93.333	Oryzias_latipes_hsok
ENSEBUG00000003639	-	84	68.504	ENSOMEG00000003606	lsm4	52	93.333	Oryzias_melastigma
ENSEBUG00000003639	-	64	70.370	ENSOGAG00000027992	LSM4	73	70.370	Otolemur_garnettii
ENSEBUG00000003639	-	64	70.476	ENSOARG00000012553	LSM4	72	70.476	Ovis_aries
ENSEBUG00000003639	-	50	93.333	ENSPPAG00000044045	-	54	93.333	Pan_paniscus
ENSEBUG00000003639	-	53	88.750	ENSPPRG00000018264	LSM4	54	93.333	Panthera_pardus
ENSEBUG00000003639	-	52	88.608	ENSPTIG00000006306	LSM4	54	93.243	Panthera_tigris_altaica
ENSEBUG00000003639	-	50	93.333	ENSPTRG00000031470	LSM4	54	93.333	Pan_troglodytes
ENSEBUG00000003639	-	53	88.750	ENSPANG00000014399	LSM4	99	70.588	Papio_anubis
ENSEBUG00000003639	-	63	78.947	ENSPKIG00000006154	lsm4	53	93.333	Paramormyrops_kingsleyae
ENSEBUG00000003639	-	52	88.608	ENSPSIG00000012358	LSM4	54	93.243	Pelodiscus_sinensis
ENSEBUG00000003639	-	50	93.333	ENSPEMG00000001358	Lsm4	54	93.333	Peromyscus_maniculatus_bairdii
ENSEBUG00000003639	-	72	73.148	ENSPLAG00000016267	lsm4	52	93.333	Poecilia_latipinna
ENSEBUG00000003639	-	84	68.504	ENSPMEG00000016378	lsm4	58	87.500	Poecilia_mexicana
ENSEBUG00000003639	-	53	88.750	ENSPPYG00000009736	LSM4	54	93.333	Pongo_abelii
ENSEBUG00000003639	-	63	78.947	ENSPCOG00000019837	LSM4	54	93.333	Propithecus_coquereli
ENSEBUG00000003639	-	53	88.750	ENSPVAG00000015383	LSM4	54	93.333	Pteropus_vampyrus
ENSEBUG00000003639	-	84	68.504	ENSPNYG00000016794	lsm4	51	93.333	Pundamilia_nyererei
ENSEBUG00000003639	-	62	78.723	ENSPNAG00000016598	lsm4	55	93.243	Pygocentrus_nattereri
ENSEBUG00000003639	-	50	93.333	ENSRNOG00000019572	Lsm4	54	93.333	Rattus_norvegicus
ENSEBUG00000003639	-	53	88.750	ENSRBIG00000024717	LSM4	99	70.000	Rhinopithecus_bieti
ENSEBUG00000003639	-	53	88.750	ENSRROG00000045706	LSM4	99	70.000	Rhinopithecus_roxellana
ENSEBUG00000003639	-	55	34.409	YER112W	LSM4	50	35.106	Saccharomyces_cerevisiae
ENSEBUG00000003639	-	53	88.750	ENSSHAG00000011559	LSM4	54	93.333	Sarcophilus_harrisii
ENSEBUG00000003639	-	63	78.947	ENSSFOG00015021067	lsm4	57	88.750	Scleropages_formosus
ENSEBUG00000003639	-	64	78.125	ENSSMAG00000021020	lsm4	50	93.333	Scophthalmus_maximus
ENSEBUG00000003639	-	64	77.083	ENSSPAG00000011615	lsm4	50	93.333	Stegastes_partitus
ENSEBUG00000003639	-	53	88.750	ENSSSCG00000034314	LSM4	54	93.333	Sus_scrofa
ENSEBUG00000003639	-	87	66.667	ENSTRUG00000021737	lsm4	56	88.750	Takifugu_rubripes
ENSEBUG00000003639	-	85	68.750	ENSTNIG00000010191	lsm4	56	88.750	Tetraodon_nigroviridis
ENSEBUG00000003639	-	50	93.333	ENSUAMG00000000665	LSM4	62	93.333	Ursus_americanus
ENSEBUG00000003639	-	53	88.750	ENSUMAG00000009013	LSM4	54	93.333	Ursus_maritimus
ENSEBUG00000003639	-	63	78.947	ENSXETG00000024933	lsm4	54	93.333	Xenopus_tropicalis