EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003668 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 260250 bases
Position: chrFYBX02010014.1:2777980-3038229
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005406	La	PF05383.17	2.1e-19	1	1
ENSEBUP00000005381	La	PF05383.17	2.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005819	-	3313	-	ENSEBUP00000005381	1062 (aa)	-	-
ENSEBUT00000005844	-	3270	-	ENSEBUP00000005406	1014 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003668	larp1b	90	51.789	ENSG00000138709	LARP1B	94	51.676	Homo_sapiens
ENSEBUG00000003668	larp1b	93	46.246	ENSAPOG00000020101	larp1b	85	46.116	Acanthochromis_polyacanthus
ENSEBUG00000003668	larp1b	58	46.053	ENSAMEG00000002748	LARP1B	98	45.439	Ailuropoda_melanoleuca
ENSEBUG00000003668	larp1b	95	43.842	ENSACIG00000023890	larp1b	86	44.063	Amphilophus_citrinellus
ENSEBUG00000003668	larp1b	90	42.917	ENSAOCG00000014268	larp1b	89	44.004	Amphiprion_ocellaris
ENSEBUG00000003668	larp1b	95	45.272	ENSAPEG00000004126	larp1b	85	46.324	Amphiprion_percula
ENSEBUG00000003668	larp1b	95	45.582	ENSATEG00000017849	larp1b	88	45.623	Anabas_testudineus
ENSEBUG00000003668	larp1b	89	49.947	ENSAPLG00000010129	LARP1B	98	49.684	Anas_platyrhynchos
ENSEBUG00000003668	larp1b	92	50.307	ENSACAG00000011338	LARP1B	99	48.851	Anolis_carolinensis
ENSEBUG00000003668	larp1b	77	46.380	ENSANAG00000034618	LARP1B	94	39.589	Aotus_nancymaae
ENSEBUG00000003668	larp1b	95	45.684	ENSACLG00000011948	larp1b	88	46.848	Astatotilapia_calliptera
ENSEBUG00000003668	larp1b	71	49.398	ENSAMXG00000006805	larp1b	84	43.068	Astyanax_mexicanus
ENSEBUG00000003668	larp1b	90	51.757	ENSBTAG00000012135	LARP1B	98	42.561	Bos_taurus
ENSEBUG00000003668	larp1b	87	52.188	ENSCJAG00000003338	LARP1B	99	51.052	Callithrix_jacchus
ENSEBUG00000003668	larp1b	90	50.269	ENSCAFG00000003831	LARP1B	98	49.083	Canis_familiaris
ENSEBUG00000003668	larp1b	87	51.892	ENSCAFG00020018899	LARP1B	92	51.456	Canis_lupus_dingo
ENSEBUG00000003668	larp1b	87	51.469	ENSCHIG00000023144	LARP1B	92	50.163	Capra_hircus
ENSEBUG00000003668	larp1b	87	52.052	ENSCCAG00000021948	LARP1B	94	51.784	Cebus_capucinus
ENSEBUG00000003668	larp1b	87	52.000	ENSCATG00000013541	LARP1B	94	51.082	Cercocebus_atys
ENSEBUG00000003668	larp1b	87	52.586	ENSCSAG00000003582	LARP1B	94	51.348	Chlorocebus_sabaeus
ENSEBUG00000003668	larp1b	71	52.589	ENSCHOG00000005354	LARP1B	73	53.134	Choloepus_hoffmanni
ENSEBUG00000003668	larp1b	95	50.249	ENSCPBG00000017480	LARP1B	89	49.950	Chrysemys_picta_bellii
ENSEBUG00000003668	larp1b	87	50.489	ENSCANG00000026958	LARP1B	94	49.783	Colobus_angolensis_palliatus
ENSEBUG00000003668	larp1b	92	45.946	ENSCSEG00000013519	larp1b	85	45.796	Cynoglossus_semilaevis
ENSEBUG00000003668	larp1b	96	45.029	ENSCVAG00000005046	larp1b	88	45.463	Cyprinodon_variegatus
ENSEBUG00000003668	larp1b	71	49.128	ENSDARG00000061169	larp1b	86	43.083	Danio_rerio
ENSEBUG00000003668	larp1b	53	44.523	ENSDNOG00000018765	-	98	44.779	Dasypus_novemcinctus
ENSEBUG00000003668	larp1b	75	50.714	ENSETEG00000012497	LARP1B	79	51.143	Echinops_telfairi
ENSEBUG00000003668	larp1b	87	51.029	ENSEASG00005018106	LARP1B	99	47.774	Equus_asinus_asinus
ENSEBUG00000003668	larp1b	90	52.299	ENSECAG00000001088	LARP1B	84	50.252	Equus_caballus
ENSEBUG00000003668	larp1b	65	44.298	ENSELUG00000023774	larp1b	90	38.020	Esox_lucius
ENSEBUG00000003668	larp1b	55	43.576	ENSFCAG00000014650	-	98	43.130	Felis_catus
ENSEBUG00000003668	larp1b	87	48.973	ENSFALG00000008098	LARP1B	93	48.156	Ficedula_albicollis
ENSEBUG00000003668	larp1b	93	45.217	ENSFHEG00000010264	larp1b	82	45.135	Fundulus_heteroclitus
ENSEBUG00000003668	larp1b	78	69.796	ENSGMOG00000005207	larp1b	71	71.020	Gadus_morhua
ENSEBUG00000003668	larp1b	94	47.671	ENSGALG00000010207	LARP1B	91	47.988	Gallus_gallus
ENSEBUG00000003668	larp1b	76	52.017	ENSGAFG00000012012	larp1b	81	50.318	Gambusia_affinis
ENSEBUG00000003668	larp1b	95	49.251	ENSGAGG00000017209	LARP1B	89	49.950	Gopherus_agassizii
ENSEBUG00000003668	larp1b	87	51.620	ENSGGOG00000015900	LARP1B	94	51.892	Gorilla_gorilla
ENSEBUG00000003668	larp1b	95	45.355	ENSHBUG00000009730	larp1b	87	46.467	Haplochromis_burtoni
ENSEBUG00000003668	larp1b	70	53.212	ENSHCOG00000000918	larp1b	91	53.352	Hippocampus_comes
ENSEBUG00000003668	larp1b	95	44.697	ENSIPUG00000012138	larp1b	86	44.142	Ictalurus_punctatus
ENSEBUG00000003668	larp1b	92	47.040	ENSKMAG00000011589	larp1b	87	46.800	Kryptolebias_marmoratus
ENSEBUG00000003668	larp1b	95	44.910	ENSLBEG00000005655	larp1b	88	45.692	Labrus_bergylta
ENSEBUG00000003668	larp1b	97	50.837	ENSLACG00000015247	LARP1B	99	42.512	Latimeria_chalumnae
ENSEBUG00000003668	larp1b	91	50.311	ENSLOCG00000010684	larp1b	91	50.518	Lepisosteus_oculatus
ENSEBUG00000003668	larp1b	87	52.757	ENSMFAG00000002218	LARP1B	94	51.299	Macaca_fascicularis
ENSEBUG00000003668	larp1b	87	52.865	ENSMMUG00000021347	LARP1B	94	51.623	Macaca_mulatta
ENSEBUG00000003668	larp1b	68	57.444	ENSMNEG00000030406	LARP1B	89	57.303	Macaca_nemestrina
ENSEBUG00000003668	larp1b	87	51.366	ENSMLEG00000009306	LARP1B	94	50.763	Mandrillus_leucophaeus
ENSEBUG00000003668	larp1b	70	54.092	ENSMAMG00000000081	larp1b	86	47.236	Mastacembelus_armatus
ENSEBUG00000003668	larp1b	71	53.203	ENSMZEG00005002545	larp1b	82	53.343	Maylandia_zebra
ENSEBUG00000003668	larp1b	89	46.372	ENSMGAG00000004809	LARP1B	85	54.066	Meleagris_gallopavo
ENSEBUG00000003668	larp1b	87	52.683	ENSMICG00000036111	LARP1B	94	52.079	Microcebus_murinus
ENSEBUG00000003668	larp1b	54	35.893	ENSMICG00000028052	-	99	34.875	Microcebus_murinus
ENSEBUG00000003668	larp1b	90	52.571	ENSMODG00000012300	LARP1B	79	52.836	Monodelphis_domestica
ENSEBUG00000003668	larp1b	93	45.720	ENSMALG00000003638	larp1b	85	45.854	Monopterus_albus
ENSEBUG00000003668	larp1b	90	53.526	ENSMPUG00000017365	LARP1B	84	51.552	Mustela_putorius_furo
ENSEBUG00000003668	larp1b	90	51.883	ENSMLUG00000010229	LARP1B	97	50.628	Myotis_lucifugus
ENSEBUG00000003668	larp1b	80	48.329	ENSNBRG00000023846	larp1b	78	48.540	Neolamprologus_brichardi
ENSEBUG00000003668	larp1b	87	51.940	ENSNLEG00000013819	LARP1B	94	52.211	Nomascus_leucogenys
ENSEBUG00000003668	larp1b	61	67.391	ENSMEUG00000010308	LARP1B	66	67.391	Notamacropus_eugenii
ENSEBUG00000003668	larp1b	70	55.263	ENSOPRG00000005478	LARP1B	80	56.103	Ochotona_princeps
ENSEBUG00000003668	larp1b	93	46.856	ENSONIG00000012386	larp1b	97	47.059	Oreochromis_niloticus
ENSEBUG00000003668	larp1b	87	52.131	ENSOCUG00000013330	LARP1B	92	50.931	Oryctolagus_cuniculus
ENSEBUG00000003668	larp1b	93	47.262	ENSORLG00000017954	larp1b	90	46.442	Oryzias_latipes
ENSEBUG00000003668	larp1b	93	46.957	ENSORLG00020013081	larp1b	90	46.442	Oryzias_latipes_hni
ENSEBUG00000003668	larp1b	93	47.817	ENSORLG00015009580	larp1b	90	46.469	Oryzias_latipes_hsok
ENSEBUG00000003668	larp1b	93	46.266	ENSOMEG00000004210	larp1b	84	46.910	Oryzias_melastigma
ENSEBUG00000003668	larp1b	90	51.493	ENSOGAG00000005771	LARP1B	99	50.640	Otolemur_garnettii
ENSEBUG00000003668	larp1b	87	51.302	ENSOARG00000015300	LARP1B	94	50.000	Ovis_aries
ENSEBUG00000003668	larp1b	87	51.404	ENSPPAG00000030439	LARP1B	94	51.676	Pan_paniscus
ENSEBUG00000003668	larp1b	55	43.576	ENSPPRG00000002743	-	98	43.130	Panthera_pardus
ENSEBUG00000003668	larp1b	55	43.576	ENSPTIG00000011225	LARP1B	98	43.130	Panthera_tigris_altaica
ENSEBUG00000003668	larp1b	87	51.404	ENSPTRG00000016437	LARP1B	94	51.676	Pan_troglodytes
ENSEBUG00000003668	larp1b	87	52.865	ENSPANG00000012488	LARP1B	94	51.623	Papio_anubis
ENSEBUG00000003668	larp1b	78	49.167	ENSPKIG00000014360	larp1b	81	50.069	Paramormyrops_kingsleyae
ENSEBUG00000003668	larp1b	92	51.860	ENSPSIG00000012885	LARP1B	97	52.120	Pelodiscus_sinensis
ENSEBUG00000003668	larp1b	70	52.441	ENSPMGG00000007207	larp1b	77	52.301	Periophthalmus_magnuspinnatus
ENSEBUG00000003668	larp1b	71	54.878	ENSPMAG00000002700	larp1b	95	50.470	Petromyzon_marinus
ENSEBUG00000003668	larp1b	88	52.068	ENSPCIG00000026516	LARP1B	88	58.114	Phascolarctos_cinereus
ENSEBUG00000003668	larp1b	93	45.545	ENSPFOG00000019519	larp1b	84	46.184	Poecilia_formosa
ENSEBUG00000003668	larp1b	60	36.145	ENSPFOG00000022837	-	87	36.295	Poecilia_formosa
ENSEBUG00000003668	larp1b	93	45.391	ENSPLAG00000007115	larp1b	84	45.763	Poecilia_latipinna
ENSEBUG00000003668	larp1b	93	45.683	ENSPMEG00000001224	larp1b	84	46.054	Poecilia_mexicana
ENSEBUG00000003668	larp1b	87	51.130	ENSPCAG00000007546	LARP1B	94	49.514	Procavia_capensis
ENSEBUG00000003668	larp1b	86	66.346	ENSPCOG00000021874	LARP1B	93	66.346	Propithecus_coquereli
ENSEBUG00000003668	larp1b	87	49.562	ENSPVAG00000005373	LARP1B	94	48.850	Pteropus_vampyrus
ENSEBUG00000003668	larp1b	71	53.064	ENSPNYG00000017357	larp1b	83	53.482	Pundamilia_nyererei
ENSEBUG00000003668	larp1b	71	52.174	ENSPNAG00000008823	larp1b	83	44.914	Pygocentrus_nattereri
ENSEBUG00000003668	larp1b	55	43.902	ENSRBIG00000039982	-	99	43.979	Rhinopithecus_bieti
ENSEBUG00000003668	larp1b	87	52.108	ENSRROG00000030771	LARP1B	94	51.190	Rhinopithecus_roxellana
ENSEBUG00000003668	larp1b	69	47.483	ENSSHAG00000014474	LARP1B	99	47.275	Sarcophilus_harrisii
ENSEBUG00000003668	larp1b	90	46.597	ENSSMAG00000006347	larp1b	90	46.091	Scophthalmus_maximus
ENSEBUG00000003668	larp1b	96	45.296	ENSSDUG00000004182	larp1b	87	45.560	Seriola_dumerili
ENSEBUG00000003668	larp1b	84	63.883	ENSSLDG00000014613	larp1b	84	64.108	Seriola_lalandi_dorsalis
ENSEBUG00000003668	larp1b	72	64.865	ENSSPUG00000011837	LARP1B	82	62.971	Sphenodon_punctatus
ENSEBUG00000003668	larp1b	93	45.744	ENSSPAG00000017772	larp1b	85	45.871	Stegastes_partitus
ENSEBUG00000003668	larp1b	90	51.974	ENSSSCG00000034280	LARP1B	99	67.416	Sus_scrofa
ENSEBUG00000003668	larp1b	70	52.394	ENSTGUG00000002098	-	77	54.482	Taeniopygia_guttata
ENSEBUG00000003668	larp1b	93	46.279	ENSTRUG00000005612	larp1b	84	46.694	Takifugu_rubripes
ENSEBUG00000003668	larp1b	85	51.093	ENSTNIG00000012398	larp1b	93	46.290	Tetraodon_nigroviridis
ENSEBUG00000003668	larp1b	67	46.485	ENSTBEG00000004177	LARP1B	71	46.485	Tupaia_belangeri
ENSEBUG00000003668	larp1b	81	52.184	ENSTTRG00000012984	LARP1B	86	50.946	Tursiops_truncatus
ENSEBUG00000003668	larp1b	87	52.308	ENSUMAG00000007373	LARP1B	92	51.265	Ursus_maritimus
ENSEBUG00000003668	larp1b	72	50.467	ENSVPAG00000007223	LARP1B	75	50.601	Vicugna_pacos
ENSEBUG00000003668	larp1b	87	52.360	ENSVVUG00000011307	LARP1B	99	51.106	Vulpes_vulpes
ENSEBUG00000003668	larp1b	93	45.971	ENSXETG00000022512	larp1b	89	46.074	Xenopus_tropicalis
ENSEBUG00000003668	larp1b	67	49.563	ENSXCOG00000004435	larp1b	72	46.461	Xiphophorus_couchianus
ENSEBUG00000003668	larp1b	93	45.902	ENSXMAG00000008150	larp1b	84	46.368	Xiphophorus_maculatus