EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003696 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 197554 bases
Position: chrFYBX02010105.1:587100-784653
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005482	SRP72	PF08492.12	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005921	-	1530	-	ENSEBUP00000005482	509 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003696	srp72	96	61.633	ENSG00000174780	SRP72	73	61.382	Homo_sapiens
ENSEBUG00000003696	srp72	98	48.513	ENSAPOG00000019438	srp72	85	48.960	Acanthochromis_polyacanthus
ENSEBUG00000003696	srp72	95	63.333	ENSAMEG00000008469	SRP72	73	61.789	Ailuropoda_melanoleuca
ENSEBUG00000003696	srp72	97	63.673	ENSACIG00000000488	srp72	75	62.109	Amphilophus_citrinellus
ENSEBUG00000003696	srp72	97	62.449	ENSAOCG00000011256	srp72	73	62.195	Amphiprion_ocellaris
ENSEBUG00000003696	srp72	97	63.374	ENSAPEG00000001512	srp72	75	62.602	Amphiprion_percula
ENSEBUG00000003696	srp72	90	63.265	ENSATEG00000006781	srp72	76	61.719	Anabas_testudineus
ENSEBUG00000003696	srp72	96	61.224	ENSAPLG00000008751	SRP72	73	60.976	Anas_platyrhynchos
ENSEBUG00000003696	srp72	96	62.449	ENSACAG00000002381	SRP72	74	61.200	Anolis_carolinensis
ENSEBUG00000003696	srp72	93	61.633	ENSANAG00000020836	-	90	51.037	Aotus_nancymaae
ENSEBUG00000003696	srp72	97	64.609	ENSACLG00000014617	srp72	75	62.500	Astatotilapia_calliptera
ENSEBUG00000003696	srp72	98	61.328	ENSAMXG00000004011	srp72	75	61.328	Astyanax_mexicanus
ENSEBUG00000003696	srp72	95	62.083	ENSBTAG00000010593	SRP72	72	61.826	Bos_taurus
ENSEBUG00000003696	srp72	91	38.806	WBGene00017245	srpa-72	71	38.265	Caenorhabditis_elegans
ENSEBUG00000003696	srp72	96	61.633	ENSCJAG00000017998	SRP72	91	52.282	Callithrix_jacchus
ENSEBUG00000003696	srp72	96	62.041	ENSCAFG00000002244	SRP72	73	61.789	Canis_familiaris
ENSEBUG00000003696	srp72	96	62.041	ENSCAFG00020027338	SRP72	80	62.500	Canis_lupus_dingo
ENSEBUG00000003696	srp72	95	59.921	ENSCHIG00000021465	SRP72	72	60.000	Capra_hircus
ENSEBUG00000003696	srp72	96	62.041	ENSTSYG00000010571	-	91	51.452	Carlito_syrichta
ENSEBUG00000003696	srp72	88	46.414	ENSCAPG00000016668	SRP72	91	51.452	Cavia_aperea
ENSEBUG00000003696	srp72	96	62.041	ENSCPOG00000000218	SRP72	73	61.789	Cavia_porcellus
ENSEBUG00000003696	srp72	97	60.000	ENSCCAG00000030830	-	76	59.756	Cebus_capucinus
ENSEBUG00000003696	srp72	92	62.917	ENSCCAG00000030683	-	91	51.867	Cebus_capucinus
ENSEBUG00000003696	srp72	98	42.883	ENSCATG00000045359	-	85	43.750	Cercocebus_atys
ENSEBUG00000003696	srp72	96	61.633	ENSCATG00000008072	SRP72	75	62.295	Cercocebus_atys
ENSEBUG00000003696	srp72	96	62.449	ENSCLAG00000003571	SRP72	73	62.195	Chinchilla_lanigera
ENSEBUG00000003696	srp72	96	61.633	ENSCSAG00000005079	SRP72	73	61.382	Chlorocebus_sabaeus
ENSEBUG00000003696	srp72	69	69.841	ENSCHOG00000013240	SRP72	53	68.750	Choloepus_hoffmanni
ENSEBUG00000003696	srp72	96	61.633	ENSCPBG00000015015	SRP72	73	61.382	Chrysemys_picta_bellii
ENSEBUG00000003696	srp72	93	48.548	ENSCING00000002417	-	69	48.548	Ciona_intestinalis
ENSEBUG00000003696	srp72	93	44.355	ENSCSAVG00000011288	-	86	30.986	Ciona_savignyi
ENSEBUG00000003696	srp72	96	61.633	ENSCANG00000041709	SRP72	75	62.295	Colobus_angolensis_palliatus
ENSEBUG00000003696	srp72	99	43.470	ENSCANG00000037920	-	84	44.466	Colobus_angolensis_palliatus
ENSEBUG00000003696	srp72	96	61.633	ENSCGRG00001013548	Srp72	73	61.382	Cricetulus_griseus_chok1gshd
ENSEBUG00000003696	srp72	96	61.633	ENSCGRG00000003013	Srp72	78	60.236	Cricetulus_griseus_crigri
ENSEBUG00000003696	srp72	98	61.628	ENSCSEG00000003616	srp72	77	61.628	Cynoglossus_semilaevis
ENSEBUG00000003696	srp72	89	62.857	ENSCVAG00000001520	srp72	74	62.857	Cyprinodon_variegatus
ENSEBUG00000003696	srp72	95	62.205	ENSDARG00000014139	srp72	84	62.205	Danio_rerio
ENSEBUG00000003696	srp72	96	62.449	ENSDNOG00000039012	SRP72	61	62.195	Dasypus_novemcinctus
ENSEBUG00000003696	srp72	96	62.041	ENSDORG00000000171	Srp72	73	61.789	Dipodomys_ordii
ENSEBUG00000003696	srp72	94	46.862	FBgn0038810	Srp72	72	46.862	Drosophila_melanogaster
ENSEBUG00000003696	srp72	96	62.449	ENSETEG00000005191	SRP72	73	62.195	Echinops_telfairi
ENSEBUG00000003696	srp72	96	62.041	ENSEASG00005017747	SRP72	73	61.789	Equus_asinus_asinus
ENSEBUG00000003696	srp72	96	62.041	ENSECAG00000006920	SRP72	73	61.789	Equus_caballus
ENSEBUG00000003696	srp72	98	63.386	ENSELUG00000022415	srp72	82	60.287	Esox_lucius
ENSEBUG00000003696	srp72	96	62.041	ENSFCAG00000027600	SRP72	73	61.789	Felis_catus
ENSEBUG00000003696	srp72	96	62.041	ENSFALG00000006713	SRP72	73	61.789	Ficedula_albicollis
ENSEBUG00000003696	srp72	96	61.633	ENSFDAG00000002014	-	73	61.382	Fukomys_damarensis
ENSEBUG00000003696	srp72	95	33.397	ENSFDAG00000009793	-	81	33.075	Fukomys_damarensis
ENSEBUG00000003696	srp72	98	61.811	ENSFHEG00000017652	srp72	69	61.328	Fundulus_heteroclitus
ENSEBUG00000003696	srp72	97	61.240	ENSGMOG00000005986	srp72	75	61.240	Gadus_morhua
ENSEBUG00000003696	srp72	96	62.449	ENSGALG00000011403	SRP72	73	62.195	Gallus_gallus
ENSEBUG00000003696	srp72	97	62.449	ENSGAFG00000017762	srp72	74	62.195	Gambusia_affinis
ENSEBUG00000003696	srp72	98	63.281	ENSGACG00000016749	srp72	75	63.281	Gasterosteus_aculeatus
ENSEBUG00000003696	srp72	96	61.983	ENSGAGG00000024611	SRP72	81	61.728	Gopherus_agassizii
ENSEBUG00000003696	srp72	96	61.224	ENSGGOG00000013234	-	91	51.452	Gorilla_gorilla
ENSEBUG00000003696	srp72	97	64.609	ENSHBUG00000020723	srp72	75	62.500	Haplochromis_burtoni
ENSEBUG00000003696	srp72	97	45.957	ENSHGLG00000003950	-	83	45.941	Heterocephalus_glaber_female
ENSEBUG00000003696	srp72	95	43.297	ENSHGLG00000018597	-	86	43.273	Heterocephalus_glaber_female
ENSEBUG00000003696	srp72	96	61.633	ENSHGLG00000009791	SRP72	73	61.382	Heterocephalus_glaber_female
ENSEBUG00000003696	srp72	96	60.000	ENSHGLG00000005029	-	72	59.756	Heterocephalus_glaber_female
ENSEBUG00000003696	srp72	98	40.421	ENSHGLG00000010633	-	94	46.888	Heterocephalus_glaber_female
ENSEBUG00000003696	srp72	97	45.957	ENSHGLG00100017133	-	83	45.941	Heterocephalus_glaber_male
ENSEBUG00000003696	srp72	96	61.633	ENSHGLG00100009021	SRP72	73	61.382	Heterocephalus_glaber_male
ENSEBUG00000003696	srp72	90	39.918	ENSHGLG00100009346	-	83	39.223	Heterocephalus_glaber_male
ENSEBUG00000003696	srp72	96	60.000	ENSHGLG00100011236	-	72	59.756	Heterocephalus_glaber_male
ENSEBUG00000003696	srp72	96	61.355	ENSHCOG00000013760	srp72	74	61.355	Hippocampus_comes
ENSEBUG00000003696	srp72	97	61.633	ENSIPUG00000000210	srp72	73	61.382	Ictalurus_punctatus
ENSEBUG00000003696	srp72	96	61.633	ENSSTOG00000007305	SRP72	73	61.382	Ictidomys_tridecemlineatus
ENSEBUG00000003696	srp72	96	62.041	ENSJJAG00000018324	Srp72	73	61.789	Jaculus_jaculus
ENSEBUG00000003696	srp72	98	60.938	ENSKMAG00000003776	srp72	75	60.938	Kryptolebias_marmoratus
ENSEBUG00000003696	srp72	97	64.082	ENSLOCG00000002628	srp72	74	62.500	Lepisosteus_oculatus
ENSEBUG00000003696	srp72	96	61.633	ENSLAFG00000018307	SRP72	73	61.382	Loxodonta_africana
ENSEBUG00000003696	srp72	96	61.633	ENSMFAG00000031065	SRP72	75	62.295	Macaca_fascicularis
ENSEBUG00000003696	srp72	98	45.196	ENSMFAG00000037164	-	88	45.357	Macaca_fascicularis
ENSEBUG00000003696	srp72	90	44.507	ENSMMUG00000021262	-	91	43.774	Macaca_mulatta
ENSEBUG00000003696	srp72	97	61.633	ENSMMUG00000016368	SRP72	73	61.633	Macaca_mulatta
ENSEBUG00000003696	srp72	96	61.633	ENSMNEG00000038065	-	73	61.382	Macaca_nemestrina
ENSEBUG00000003696	srp72	93	61.633	ENSMLEG00000030140	-	70	61.633	Mandrillus_leucophaeus
ENSEBUG00000003696	srp72	97	62.963	ENSMAMG00000014989	srp72	65	62.195	Mastacembelus_armatus
ENSEBUG00000003696	srp72	97	64.609	ENSMZEG00005003325	srp72	75	62.500	Maylandia_zebra
ENSEBUG00000003696	srp72	96	60.000	ENSMGAG00000008567	SRP72	77	62.931	Meleagris_gallopavo
ENSEBUG00000003696	srp72	96	61.633	ENSMAUG00000001237	Srp72	73	61.382	Mesocricetus_auratus
ENSEBUG00000003696	srp72	93	62.449	ENSMICG00000008507	-	90	49.378	Microcebus_murinus
ENSEBUG00000003696	srp72	96	62.041	ENSMOCG00000020309	Srp72	73	61.789	Microtus_ochrogaster
ENSEBUG00000003696	srp72	97	62.151	ENSMMOG00000002627	srp72	75	61.719	Mola_mola
ENSEBUG00000003696	srp72	93	63.673	ENSMODG00000020697	SRP72	71	63.415	Monodelphis_domestica
ENSEBUG00000003696	srp72	98	62.992	ENSMALG00000003747	srp72	83	62.500	Monopterus_albus
ENSEBUG00000003696	srp72	96	61.633	MGP_CAROLIEiJ_G0027323	Srp72	73	61.382	Mus_caroli
ENSEBUG00000003696	srp72	96	61.633	ENSMUSG00000036323	Srp72	73	61.382	Mus_musculus
ENSEBUG00000003696	srp72	96	61.633	MGP_PahariEiJ_G0017103	Srp72	73	61.382	Mus_pahari
ENSEBUG00000003696	srp72	96	61.633	MGP_SPRETEiJ_G0028317	Srp72	73	61.382	Mus_spretus
ENSEBUG00000003696	srp72	96	62.041	ENSMPUG00000004828	SRP72	73	61.789	Mustela_putorius_furo
ENSEBUG00000003696	srp72	96	61.789	ENSMLUG00000007344	SRP72	73	61.538	Myotis_lucifugus
ENSEBUG00000003696	srp72	96	61.224	ENSNGAG00000012595	Srp72	73	60.976	Nannospalax_galili
ENSEBUG00000003696	srp72	97	64.609	ENSNBRG00000014492	srp72	73	63.821	Neolamprologus_brichardi
ENSEBUG00000003696	srp72	97	55.370	ENSNLEG00000008806	-	91	51.037	Nomascus_leucogenys
ENSEBUG00000003696	srp72	96	63.673	ENSMEUG00000005164	SRP72	63	64.045	Notamacropus_eugenii
ENSEBUG00000003696	srp72	95	62.500	ENSOPRG00000012521	SRP72	72	62.241	Ochotona_princeps
ENSEBUG00000003696	srp72	96	62.449	ENSODEG00000012214	SRP72	74	62.195	Octodon_degus
ENSEBUG00000003696	srp72	97	64.609	ENSONIG00000001446	srp72	73	63.821	Oreochromis_niloticus
ENSEBUG00000003696	srp72	97	63.673	ENSOANG00000008562	SRP72	73	63.415	Ornithorhynchus_anatinus
ENSEBUG00000003696	srp72	96	61.633	ENSOCUG00000012226	SRP72	73	61.382	Oryctolagus_cuniculus
ENSEBUG00000003696	srp72	97	63.265	ENSORLG00000020418	srp72	73	63.008	Oryzias_latipes
ENSEBUG00000003696	srp72	97	62.857	ENSORLG00020009138	srp72	71	62.602	Oryzias_latipes_hni
ENSEBUG00000003696	srp72	97	62.041	ENSORLG00015018251	srp72	73	61.789	Oryzias_latipes_hsok
ENSEBUG00000003696	srp72	98	60.465	ENSOMEG00000022008	srp72	75	60.465	Oryzias_melastigma
ENSEBUG00000003696	srp72	95	63.750	ENSOGAG00000003578	SRP72	72	63.485	Otolemur_garnettii
ENSEBUG00000003696	srp72	95	62.083	ENSOARG00000004329	SRP72	72	61.826	Ovis_aries
ENSEBUG00000003696	srp72	99	42.315	ENSPPAG00000011428	-	82	43.590	Pan_paniscus
ENSEBUG00000003696	srp72	96	61.633	ENSPPAG00000042265	SRP72	96	46.347	Pan_paniscus
ENSEBUG00000003696	srp72	89	50.901	ENSPPAG00000032490	-	91	42.248	Pan_paniscus
ENSEBUG00000003696	srp72	96	62.041	ENSPPRG00000015991	SRP72	73	61.789	Panthera_pardus
ENSEBUG00000003696	srp72	96	62.041	ENSPTIG00000018786	SRP72	73	61.789	Panthera_tigris_altaica
ENSEBUG00000003696	srp72	89	50.673	ENSPTRG00000043609	-	95	42.534	Pan_troglodytes
ENSEBUG00000003696	srp72	96	61.633	ENSPTRG00000048466	-	91	51.037	Pan_troglodytes
ENSEBUG00000003696	srp72	99	44.304	ENSPTRG00000048100	-	82	45.604	Pan_troglodytes
ENSEBUG00000003696	srp72	97	42.984	ENSPANG00000030230	-	88	44.364	Papio_anubis
ENSEBUG00000003696	srp72	96	61.633	ENSPANG00000005495	SRP72	75	62.295	Papio_anubis
ENSEBUG00000003696	srp72	96	60.816	ENSPSIG00000003003	SRP72	76	60.569	Pelodiscus_sinensis
ENSEBUG00000003696	srp72	96	62.041	ENSPEMG00000012828	-	73	61.789	Peromyscus_maniculatus_bairdii
ENSEBUG00000003696	srp72	96	63.673	ENSPCIG00000000732	SRP72	73	63.415	Phascolarctos_cinereus
ENSEBUG00000003696	srp72	97	62.857	ENSPFOG00000003480	srp72	74	62.602	Poecilia_formosa
ENSEBUG00000003696	srp72	97	62.857	ENSPLAG00000020122	srp72	74	62.602	Poecilia_latipinna
ENSEBUG00000003696	srp72	97	62.449	ENSPMEG00000019988	srp72	83	59.829	Poecilia_mexicana
ENSEBUG00000003696	srp72	97	62.449	ENSPREG00000006218	srp72	74	62.195	Poecilia_reticulata
ENSEBUG00000003696	srp72	57	58.140	ENSPPYG00000009152	-	74	58.140	Pongo_abelii
ENSEBUG00000003696	srp72	96	61.633	ENSPPYG00000014752	-	57	61.633	Pongo_abelii
ENSEBUG00000003696	srp72	96	62.041	ENSPVAG00000005590	SRP72	74	61.789	Pteropus_vampyrus
ENSEBUG00000003696	srp72	97	64.609	ENSPNYG00000001916	srp72	73	64.344	Pundamilia_nyererei
ENSEBUG00000003696	srp72	97	62.195	ENSPNAG00000022424	srp72	73	62.195	Pygocentrus_nattereri
ENSEBUG00000003696	srp72	96	61.224	ENSRNOG00000002100	LOC108348180	91	52.282	Rattus_norvegicus
ENSEBUG00000003696	srp72	96	43.214	ENSRBIG00000029328	-	84	43.853	Rhinopithecus_bieti
ENSEBUG00000003696	srp72	94	63.291	ENSRBIG00000042069	SRP72	75	62.295	Rhinopithecus_bieti
ENSEBUG00000003696	srp72	96	61.633	ENSRROG00000035704	SRP72	75	62.295	Rhinopithecus_roxellana
ENSEBUG00000003696	srp72	96	63.673	ENSSHAG00000000614	SRP72	73	63.673	Sarcophilus_harrisii
ENSEBUG00000003696	srp72	98	61.240	ENSSFOG00015002026	srp72	75	61.240	Scleropages_formosus
ENSEBUG00000003696	srp72	97	63.265	ENSSMAG00000007639	srp72	74	63.008	Scophthalmus_maximus
ENSEBUG00000003696	srp72	97	63.673	ENSSDUG00000007345	srp72	72	63.415	Seriola_dumerili
ENSEBUG00000003696	srp72	97	63.673	ENSSLDG00000021819	srp72	72	63.415	Seriola_lalandi_dorsalis
ENSEBUG00000003696	srp72	96	61.633	ENSSPUG00000009740	SRP72	73	61.382	Sphenodon_punctatus
ENSEBUG00000003696	srp72	97	63.265	ENSSPAG00000011565	srp72	73	63.008	Stegastes_partitus
ENSEBUG00000003696	srp72	99	58.148	ENSSSCG00000008900	SRP72	73	59.438	Sus_scrofa
ENSEBUG00000003696	srp72	96	62.041	ENSTGUG00000004767	SRP72	73	61.789	Taeniopygia_guttata
ENSEBUG00000003696	srp72	97	63.265	ENSTRUG00000009831	srp72	85	52.113	Takifugu_rubripes
ENSEBUG00000003696	srp72	97	64.490	ENSTNIG00000013073	srp72	73	64.490	Tetraodon_nigroviridis
ENSEBUG00000003696	srp72	83	69.767	ENSTBEG00000007394	SRP72	63	69.767	Tupaia_belangeri
ENSEBUG00000003696	srp72	95	62.083	ENSTTRG00000010945	SRP72	78	60.643	Tursiops_truncatus
ENSEBUG00000003696	srp72	57	67.391	ENSUAMG00000001701	SRP72	73	67.391	Ursus_americanus
ENSEBUG00000003696	srp72	95	63.333	ENSUMAG00000008151	SRP72	72	63.071	Ursus_maritimus
ENSEBUG00000003696	srp72	96	58.167	ENSVPAG00000000458	SRP72	73	57.540	Vicugna_pacos
ENSEBUG00000003696	srp72	96	62.041	ENSVVUG00000006020	SRP72	73	61.789	Vulpes_vulpes
ENSEBUG00000003696	srp72	97	59.843	ENSXETG00000010205	srp72	78	59.843	Xenopus_tropicalis
ENSEBUG00000003696	srp72	97	62.449	ENSXMAG00000018000	srp72	73	62.195	Xiphophorus_maculatus