EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ30829|RNPC6|dJ259A10.1
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 90554 bases
Position: chrFYBX02009888.1:2449506-2540059
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005575	RRM_1	PF00076.22	3.5e-16	1	1
ENSEBUP00000005597	RRM_1	PF00076.22	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006013	-	1706	-	ENSEBUP00000005575	203 (aa)	-	-
ENSEBUT00000006038	-	1409	-	ENSEBUP00000005597	203 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003787	-	66	67.391	ENSEBUG00000008945	rbm24a	70	67.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003787	-	72	68.667	ENSG00000112183	RBM24	90	81.944	Homo_sapiens
ENSEBUG00000003787	-	72	66.234	ENSAPOG00000000789	rbm24b	90	55.189	Acanthochromis_polyacanthus
ENSEBUG00000003787	-	64	73.485	ENSAPOG00000019514	rbm24a	87	59.701	Acanthochromis_polyacanthus
ENSEBUG00000003787	-	64	73.485	ENSACIG00000010987	rbm24a	87	59.204	Amphilophus_citrinellus
ENSEBUG00000003787	-	72	61.039	ENSACIG00000015650	rbm24b	90	51.415	Amphilophus_citrinellus
ENSEBUG00000003787	-	64	73.485	ENSAOCG00000000378	rbm24a	87	59.701	Amphiprion_ocellaris
ENSEBUG00000003787	-	72	66.234	ENSAOCG00000023764	rbm24b	90	55.189	Amphiprion_ocellaris
ENSEBUG00000003787	-	72	66.234	ENSAPEG00000010059	rbm24b	90	55.189	Amphiprion_percula
ENSEBUG00000003787	-	64	73.485	ENSAPEG00000012234	rbm24a	87	59.701	Amphiprion_percula
ENSEBUG00000003787	-	72	66.234	ENSATEG00000005396	rbm24b	90	55.189	Anabas_testudineus
ENSEBUG00000003787	-	64	73.485	ENSATEG00000014195	rbm24a	86	59.799	Anabas_testudineus
ENSEBUG00000003787	-	72	70.000	ENSACAG00000003962	RBM24	94	56.682	Anolis_carolinensis
ENSEBUG00000003787	-	72	68.667	ENSANAG00000029310	RBM24	83	58.883	Aotus_nancymaae
ENSEBUG00000003787	-	72	65.584	ENSACLG00000004207	rbm24b	90	54.717	Astatotilapia_calliptera
ENSEBUG00000003787	-	64	73.485	ENSACLG00000016929	rbm24a	80	59.184	Astatotilapia_calliptera
ENSEBUG00000003787	-	72	69.536	ENSAMXG00000040572	rbm24a	94	57.407	Astyanax_mexicanus
ENSEBUG00000003787	-	72	68.667	ENSBTAG00000015396	RBM24	83	58.883	Bos_taurus
ENSEBUG00000003787	-	72	68.667	ENSCJAG00000006579	RBM24	83	58.883	Callithrix_jacchus
ENSEBUG00000003787	-	53	73.394	ENSCAFG00000009942	-	94	73.394	Canis_familiaris
ENSEBUG00000003787	-	72	68.874	ENSCAFG00020012640	RBM24	84	59.091	Canis_lupus_dingo
ENSEBUG00000003787	-	72	64.667	ENSCHIG00000013536	RBM24	65	86.170	Capra_hircus
ENSEBUG00000003787	-	54	63.393	ENSTSYG00000031245	RBM24	67	52.830	Carlito_syrichta
ENSEBUG00000003787	-	72	68.667	ENSCPOG00000038459	RBM24	83	58.883	Cavia_porcellus
ENSEBUG00000003787	-	72	68.667	ENSCCAG00000030791	RBM24	78	58.883	Cebus_capucinus
ENSEBUG00000003787	-	72	68.667	ENSCATG00000010509	RBM24	78	58.883	Cercocebus_atys
ENSEBUG00000003787	-	72	68.667	ENSCLAG00000002136	RBM24	83	58.883	Chinchilla_lanigera
ENSEBUG00000003787	-	72	68.667	ENSCSAG00000007599	RBM24	83	58.883	Chlorocebus_sabaeus
ENSEBUG00000003787	-	72	68.667	ENSCPBG00000008291	RBM24	94	56.808	Chrysemys_picta_bellii
ENSEBUG00000003787	-	72	68.667	ENSCANG00000030245	RBM24	78	58.883	Colobus_angolensis_palliatus
ENSEBUG00000003787	-	72	68.667	ENSCGRG00001010535	Rbm24	83	58.883	Cricetulus_griseus_chok1gshd
ENSEBUG00000003787	-	72	68.667	ENSCGRG00000011732	Rbm24	83	58.883	Cricetulus_griseus_crigri
ENSEBUG00000003787	-	72	64.331	ENSCSEG00000004378	rbm24b	84	54.338	Cynoglossus_semilaevis
ENSEBUG00000003787	-	64	73.485	ENSCSEG00000017958	rbm24a	88	59.512	Cynoglossus_semilaevis
ENSEBUG00000003787	-	89	58.586	ENSCVAG00000020675	rbm24a	86	60.101	Cyprinodon_variegatus
ENSEBUG00000003787	-	72	65.385	ENSCVAG00000011805	rbm24b	83	56.098	Cyprinodon_variegatus
ENSEBUG00000003787	-	53	83.486	ENSDARG00000031809	rbm24b	77	83.486	Danio_rerio
ENSEBUG00000003787	-	72	69.536	ENSDARG00000102995	rbm24a	94	81.651	Danio_rerio
ENSEBUG00000003787	-	72	68.667	ENSDORG00000028400	Rbm24	83	58.883	Dipodomys_ordii
ENSEBUG00000003787	-	72	68.667	ENSEASG00005011789	RBM24	83	58.883	Equus_asinus_asinus
ENSEBUG00000003787	-	72	68.667	ENSECAG00000009819	RBM24	83	58.883	Equus_caballus
ENSEBUG00000003787	-	64	73.684	ENSELUG00000007163	rbm24a	94	55.300	Esox_lucius
ENSEBUG00000003787	-	64	72.180	ENSELUG00000002970	-	89	58.095	Esox_lucius
ENSEBUG00000003787	-	72	68.667	ENSFCAG00000046251	RBM24	83	58.883	Felis_catus
ENSEBUG00000003787	-	74	69.281	ENSFALG00000013398	RBM24	63	69.281	Ficedula_albicollis
ENSEBUG00000003787	-	89	59.204	ENSFHEG00000013449	rbm24a	86	59.204	Fundulus_heteroclitus
ENSEBUG00000003787	-	72	43.506	ENSFHEG00000015627	rbm24b	89	39.437	Fundulus_heteroclitus
ENSEBUG00000003787	-	66	71.111	ENSGMOG00000010412	rbm24a	65	68.310	Gadus_morhua
ENSEBUG00000003787	-	89	60.317	ENSGMOG00000007015	rbm24b	95	56.938	Gadus_morhua
ENSEBUG00000003787	-	72	69.333	ENSGALG00000012712	RBM24	94	56.604	Gallus_gallus
ENSEBUG00000003787	-	72	65.385	ENSGAFG00000006003	rbm24b	83	56.098	Gambusia_affinis
ENSEBUG00000003787	-	87	63.536	ENSGAFG00000020326	-	74	63.536	Gambusia_affinis
ENSEBUG00000003787	-	73	60.667	ENSGAFG00000013304	-	88	53.140	Gambusia_affinis
ENSEBUG00000003787	-	85	60.526	ENSGAFG00000010968	rbm24a	88	58.738	Gambusia_affinis
ENSEBUG00000003787	-	74	67.742	ENSGACG00000005383	rbm24a	85	63.636	Gasterosteus_aculeatus
ENSEBUG00000003787	-	89	59.474	ENSGACG00000008472	rbm24b	90	58.000	Gasterosteus_aculeatus
ENSEBUG00000003787	-	72	68.667	ENSGAGG00000016571	RBM24	94	56.808	Gopherus_agassizii
ENSEBUG00000003787	-	72	68.667	ENSGGOG00000039093	RBM24	78	58.883	Gorilla_gorilla
ENSEBUG00000003787	-	72	65.584	ENSHBUG00000017155	rbm24b	90	54.717	Haplochromis_burtoni
ENSEBUG00000003787	-	64	73.485	ENSHBUG00000003071	rbm24a	80	59.184	Haplochromis_burtoni
ENSEBUG00000003787	-	72	68.000	ENSHGLG00000008335	RBM24	83	58.376	Heterocephalus_glaber_female
ENSEBUG00000003787	-	53	81.651	ENSHCOG00000019356	rbm24a	94	81.651	Hippocampus_comes
ENSEBUG00000003787	-	66	71.852	ENSHCOG00000000137	rbm24b	90	55.300	Hippocampus_comes
ENSEBUG00000003787	-	72	67.320	ENSIPUG00000014727	rbm24	85	59.000	Ictalurus_punctatus
ENSEBUG00000003787	-	72	68.667	ENSSTOG00000022090	RBM24	83	59.391	Ictidomys_tridecemlineatus
ENSEBUG00000003787	-	72	68.667	ENSJJAG00000021705	Rbm24	83	58.883	Jaculus_jaculus
ENSEBUG00000003787	-	83	60.819	ENSKMAG00000006096	-	66	61.988	Kryptolebias_marmoratus
ENSEBUG00000003787	-	53	80.734	ENSKMAG00000014458	rbm24b	52	80.734	Kryptolebias_marmoratus
ENSEBUG00000003787	-	89	59.799	ENSKMAG00000006314	rbm24a	86	60.804	Kryptolebias_marmoratus
ENSEBUG00000003787	-	72	65.806	ENSLBEG00000000774	rbm24b	90	54.930	Labrus_bergylta
ENSEBUG00000003787	-	64	73.485	ENSLBEG00000003025	rbm24a	94	56.164	Labrus_bergylta
ENSEBUG00000003787	-	72	68.421	ENSLACG00000011111	RBM24	94	56.621	Latimeria_chalumnae
ENSEBUG00000003787	-	73	70.395	ENSLOCG00000006244	rbm24a	86	61.929	Lepisosteus_oculatus
ENSEBUG00000003787	-	72	68.667	ENSLAFG00000000116	RBM24	83	58.673	Loxodonta_africana
ENSEBUG00000003787	-	72	68.667	ENSMFAG00000034396	RBM24	83	58.883	Macaca_fascicularis
ENSEBUG00000003787	-	72	68.667	ENSMMUG00000011384	RBM24	90	81.944	Macaca_mulatta
ENSEBUG00000003787	-	72	68.667	ENSMNEG00000040710	RBM24	78	58.883	Macaca_nemestrina
ENSEBUG00000003787	-	72	65.806	ENSMAMG00000012841	rbm24b	92	55.093	Mastacembelus_armatus
ENSEBUG00000003787	-	64	73.485	ENSMAMG00000013172	rbm24a	86	59.799	Mastacembelus_armatus
ENSEBUG00000003787	-	64	73.485	ENSMZEG00005004491	rbm24a	80	59.184	Maylandia_zebra
ENSEBUG00000003787	-	72	65.584	ENSMZEG00005014397	rbm24b	90	54.717	Maylandia_zebra
ENSEBUG00000003787	-	72	68.667	ENSMAUG00000011281	Rbm24	83	58.883	Mesocricetus_auratus
ENSEBUG00000003787	-	72	68.667	ENSMICG00000032332	RBM24	80	58.883	Microcebus_murinus
ENSEBUG00000003787	-	72	68.667	ENSMOCG00000016637	Rbm24	83	58.883	Microtus_ochrogaster
ENSEBUG00000003787	-	66	72.794	ENSMMOG00000019054	rbm24a	65	72.794	Mola_mola
ENSEBUG00000003787	-	72	66.234	ENSMMOG00000001750	rbm24b	86	78.761	Mola_mola
ENSEBUG00000003787	-	72	69.333	ENSMODG00000010899	RBM24	73	59.799	Monodelphis_domestica
ENSEBUG00000003787	-	72	66.234	ENSMALG00000011585	rbm24b	90	56.132	Monopterus_albus
ENSEBUG00000003787	-	72	68.421	ENSMALG00000014068	rbm24a	67	67.742	Monopterus_albus
ENSEBUG00000003787	-	72	68.667	MGP_CAROLIEiJ_G0018481	Rbm24	83	58.883	Mus_caroli
ENSEBUG00000003787	-	72	68.667	ENSMUSG00000038132	Rbm24	83	58.883	Mus_musculus
ENSEBUG00000003787	-	72	68.667	MGP_PahariEiJ_G0019548	Rbm24	83	58.883	Mus_pahari
ENSEBUG00000003787	-	72	68.667	MGP_SPRETEiJ_G0019360	Rbm24	83	58.883	Mus_spretus
ENSEBUG00000003787	-	72	68.667	ENSNGAG00000013939	Rbm24	83	58.883	Nannospalax_galili
ENSEBUG00000003787	-	72	65.584	ENSNBRG00000015853	rbm24b	90	55.189	Neolamprologus_brichardi
ENSEBUG00000003787	-	64	73.485	ENSNBRG00000012347	rbm24a	80	59.184	Neolamprologus_brichardi
ENSEBUG00000003787	-	72	68.667	ENSNLEG00000001075	RBM24	96	58.794	Nomascus_leucogenys
ENSEBUG00000003787	-	72	44.667	ENSMEUG00000015492	RBM24	80	41.206	Notamacropus_eugenii
ENSEBUG00000003787	-	72	57.333	ENSOPRG00000012150	-	83	50.254	Ochotona_princeps
ENSEBUG00000003787	-	72	68.667	ENSODEG00000006411	RBM24	83	58.883	Octodon_degus
ENSEBUG00000003787	-	72	65.584	ENSONIG00000003010	rbm24b	90	54.717	Oreochromis_niloticus
ENSEBUG00000003787	-	64	73.485	ENSONIG00000002504	rbm24a	76	59.184	Oreochromis_niloticus
ENSEBUG00000003787	-	74	68.831	ENSOANG00000011865	RBM24	91	68.831	Ornithorhynchus_anatinus
ENSEBUG00000003787	-	64	73.485	ENSORLG00000012546	rbm24a	81	61.702	Oryzias_latipes
ENSEBUG00000003787	-	72	65.385	ENSORLG00000007916	rbm24b	90	55.399	Oryzias_latipes
ENSEBUG00000003787	-	64	74.242	ENSORLG00020005859	rbm24a	81	62.234	Oryzias_latipes_hni
ENSEBUG00000003787	-	72	65.385	ENSORLG00020014541	rbm24b	90	55.399	Oryzias_latipes_hni
ENSEBUG00000003787	-	64	73.485	ENSORLG00015013567	rbm24a	81	61.702	Oryzias_latipes_hsok
ENSEBUG00000003787	-	72	65.385	ENSORLG00015000583	rbm24b	90	55.399	Oryzias_latipes_hsok
ENSEBUG00000003787	-	64	73.485	ENSOMEG00000011760	rbm24a	81	61.702	Oryzias_melastigma
ENSEBUG00000003787	-	72	64.968	ENSOMEG00000021525	rbm24b	90	55.140	Oryzias_melastigma
ENSEBUG00000003787	-	72	68.667	ENSOGAG00000027311	RBM24	83	58.883	Otolemur_garnettii
ENSEBUG00000003787	-	72	68.667	ENSPPRG00000005000	RBM24	83	58.883	Panthera_pardus
ENSEBUG00000003787	-	72	68.667	ENSPTRG00000017749	RBM24	78	58.883	Pan_troglodytes
ENSEBUG00000003787	-	72	68.667	ENSPANG00000033323	RBM24	83	58.883	Papio_anubis
ENSEBUG00000003787	-	64	73.485	ENSPKIG00000001701	rbm24a	86	60.204	Paramormyrops_kingsleyae
ENSEBUG00000003787	-	64	70.149	ENSPKIG00000019760	-	83	56.500	Paramormyrops_kingsleyae
ENSEBUG00000003787	-	72	68.667	ENSPSIG00000006920	RBM24	94	55.760	Pelodiscus_sinensis
ENSEBUG00000003787	-	53	81.651	ENSPMGG00000001730	rbm24a	94	81.651	Periophthalmus_magnuspinnatus
ENSEBUG00000003787	-	73	66.452	ENSPMGG00000011993	rbm24b	83	80.734	Periophthalmus_magnuspinnatus
ENSEBUG00000003787	-	70	69.178	ENSPMAG00000005910	rbm24a	62	67.974	Petromyzon_marinus
ENSEBUG00000003787	-	72	69.333	ENSPCIG00000029674	RBM24	80	59.799	Phascolarctos_cinereus
ENSEBUG00000003787	-	89	59.000	ENSPFOG00000013132	rbm24a	86	60.000	Poecilia_formosa
ENSEBUG00000003787	-	87	61.497	ENSPFOG00000005096	-	74	61.497	Poecilia_formosa
ENSEBUG00000003787	-	72	65.385	ENSPLAG00000019473	rbm24b	83	56.098	Poecilia_latipinna
ENSEBUG00000003787	-	88	58.586	ENSPLAG00000006542	rbm24a	80	59.596	Poecilia_latipinna
ENSEBUG00000003787	-	72	64.744	ENSPMEG00000022792	rbm24b	83	55.610	Poecilia_mexicana
ENSEBUG00000003787	-	89	59.000	ENSPMEG00000021740	rbm24a	86	60.000	Poecilia_mexicana
ENSEBUG00000003787	-	87	63.536	ENSPMEG00000020921	-	74	63.536	Poecilia_mexicana
ENSEBUG00000003787	-	72	64.744	ENSPMEG00000009382	-	83	55.610	Poecilia_mexicana
ENSEBUG00000003787	-	87	63.536	ENSPREG00000016652	-	84	63.536	Poecilia_reticulata
ENSEBUG00000003787	-	85	60.526	ENSPREG00000007414	rbm24a	88	58.738	Poecilia_reticulata
ENSEBUG00000003787	-	72	65.385	ENSPREG00000000762	rbm24b	83	56.098	Poecilia_reticulata
ENSEBUG00000003787	-	72	68.667	ENSPPYG00000016256	RBM24	83	58.883	Pongo_abelii
ENSEBUG00000003787	-	72	68.667	ENSPCAG00000015152	RBM24	84	58.291	Procavia_capensis
ENSEBUG00000003787	-	72	68.667	ENSPCOG00000015077	RBM24	83	58.883	Propithecus_coquereli
ENSEBUG00000003787	-	72	68.667	ENSPVAG00000004954	RBM24	83	58.883	Pteropus_vampyrus
ENSEBUG00000003787	-	64	73.485	ENSPNYG00000011118	rbm24a	80	59.184	Pundamilia_nyererei
ENSEBUG00000003787	-	72	65.584	ENSPNYG00000015684	rbm24b	90	54.717	Pundamilia_nyererei
ENSEBUG00000003787	-	72	69.536	ENSPNAG00000003816	rbm24a	94	56.881	Pygocentrus_nattereri
ENSEBUG00000003787	-	82	62.500	ENSPNAG00000018604	rbm24b	88	58.621	Pygocentrus_nattereri
ENSEBUG00000003787	-	72	67.550	ENSRNOG00000046547	Rbm24	84	58.081	Rattus_norvegicus
ENSEBUG00000003787	-	72	68.667	ENSRBIG00000044451	RBM24	83	58.883	Rhinopithecus_bieti
ENSEBUG00000003787	-	72	68.667	ENSRROG00000029486	RBM24	83	58.883	Rhinopithecus_roxellana
ENSEBUG00000003787	-	72	68.667	ENSSBOG00000030002	RBM24	83	58.883	Saimiri_boliviensis_boliviensis
ENSEBUG00000003787	-	72	69.333	ENSSHAG00000016729	RBM24	74	59.799	Sarcophilus_harrisii
ENSEBUG00000003787	-	67	71.739	ENSSFOG00015011094	rbm24a	62	71.739	Scleropages_formosus
ENSEBUG00000003787	-	89	56.633	ENSSFOG00015020384	-	93	58.000	Scleropages_formosus
ENSEBUG00000003787	-	74	57.143	ENSSFOG00015000915	rbm24b	85	51.269	Scleropages_formosus
ENSEBUG00000003787	-	72	67.742	ENSSMAG00000020117	rbm24b	77	56.338	Scophthalmus_maximus
ENSEBUG00000003787	-	64	73.485	ENSSMAG00000008449	rbm24a	86	59.500	Scophthalmus_maximus
ENSEBUG00000003787	-	72	66.234	ENSSDUG00000005955	rbm24b	90	55.189	Seriola_dumerili
ENSEBUG00000003787	-	64	73.485	ENSSDUG00000010760	rbm24a	86	60.101	Seriola_dumerili
ENSEBUG00000003787	-	64	73.485	ENSSLDG00000012657	rbm24a	86	60.101	Seriola_lalandi_dorsalis
ENSEBUG00000003787	-	72	66.234	ENSSLDG00000015378	rbm24b	90	55.189	Seriola_lalandi_dorsalis
ENSEBUG00000003787	-	72	69.333	ENSSPUG00000016665	RBM24	94	56.019	Sphenodon_punctatus
ENSEBUG00000003787	-	64	73.485	ENSSPAG00000014990	rbm24a	87	59.701	Stegastes_partitus
ENSEBUG00000003787	-	72	66.234	ENSSPAG00000007941	rbm24b	90	55.189	Stegastes_partitus
ENSEBUG00000003787	-	72	68.667	ENSSSCG00000038455	RBM24	83	58.883	Sus_scrofa
ENSEBUG00000003787	-	72	69.333	ENSTGUG00000005984	RBM24	94	57.746	Taeniopygia_guttata
ENSEBUG00000003787	-	72	67.532	ENSTRUG00000014826	rbm24b	90	56.398	Takifugu_rubripes
ENSEBUG00000003787	-	72	68.421	ENSTRUG00000010089	rbm24a	86	59.296	Takifugu_rubripes
ENSEBUG00000003787	-	98	49.038	ENSTNIG00000012600	-	87	49.038	Tetraodon_nigroviridis
ENSEBUG00000003787	-	89	62.234	ENSTNIG00000009181	rbm24a	91	62.234	Tetraodon_nigroviridis
ENSEBUG00000003787	-	89	61.053	ENSTNIG00000018417	rbm24b	90	59.500	Tetraodon_nigroviridis
ENSEBUG00000003787	-	72	68.667	ENSTTRG00000000393	RBM24	78	58.673	Tursiops_truncatus
ENSEBUG00000003787	-	72	70.270	ENSXETG00000024618	rbm24	93	56.808	Xenopus_tropicalis
ENSEBUG00000003787	-	72	65.385	ENSXCOG00000019779	rbm24b	83	56.098	Xiphophorus_couchianus
ENSEBUG00000003787	-	85	60.526	ENSXCOG00000020100	rbm24a	88	58.738	Xiphophorus_couchianus
ENSEBUG00000003787	-	72	65.385	ENSXMAG00000014017	rbm24b	83	56.098	Xiphophorus_maculatus
ENSEBUG00000003787	-	87	63.536	ENSXMAG00000028579	-	73	63.536	Xiphophorus_maculatus
ENSEBUG00000003787	-	85	60.526	ENSXMAG00000029809	rbm24a	88	58.738	Xiphophorus_maculatus