EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 85516 bases
Position: chrFYBX02009688.1:2788739-2874254
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005708	MTS	PF05175.14	1e-06	1	1
ENSEBUP00000005708	Bin3	PF06859.12	1.6e-23	1	1
ENSEBUP00000005708	Methyltransf_31	PF13847.6	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006151	-	4279	-	ENSEBUP00000005708	526 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003854	-	62	39.024	ENSG00000146834	MEPCE	73	39.024	Homo_sapiens
ENSEBUG00000003854	-	69	37.654	ENSAMEG00000015035	MEPCE	60	37.654	Ailuropoda_melanoleuca
ENSEBUG00000003854	-	55	34.426	ENSAOCG00000018539	si:ch1073-157b13.1	51	36.047	Amphiprion_ocellaris
ENSEBUG00000003854	-	55	34.426	ENSAOCG00000018483	-	52	36.047	Amphiprion_ocellaris
ENSEBUG00000003854	-	62	39.634	ENSANAG00000035127	MEPCE	50	39.634	Aotus_nancymaae
ENSEBUG00000003854	-	62	39.634	ENSCJAG00000015348	MEPCE	50	39.634	Callithrix_jacchus
ENSEBUG00000003854	-	68	39.024	ENSCHIG00000008713	MEPCE	55	39.024	Capra_hircus
ENSEBUG00000003854	-	62	38.889	ENSCPOG00000015225	MEPCE	50	38.889	Cavia_porcellus
ENSEBUG00000003854	-	62	39.634	ENSCCAG00000028766	MEPCE	50	39.634	Cebus_capucinus
ENSEBUG00000003854	-	62	39.024	ENSCATG00000027605	MEPCE	50	39.024	Cercocebus_atys
ENSEBUG00000003854	-	62	38.889	ENSCLAG00000003470	MEPCE	52	38.889	Chinchilla_lanigera
ENSEBUG00000003854	-	62	39.024	ENSCANG00000030898	MEPCE	73	39.024	Colobus_angolensis_palliatus
ENSEBUG00000003854	-	63	37.226	ENSCVAG00000001392	si:ch1073-157b13.1	70	36.810	Cyprinodon_variegatus
ENSEBUG00000003854	-	63	41.176	ENSDARG00000035771	MEPCE	55	41.176	Danio_rerio
ENSEBUG00000003854	-	62	39.634	ENSDORG00000005311	Mepce	53	39.634	Dipodomys_ordii
ENSEBUG00000003854	-	62	38.272	ENSETEG00000001440	-	57	38.272	Echinops_telfairi
ENSEBUG00000003854	-	62	38.889	ENSFDAG00000001651	MEPCE	59	38.889	Fukomys_damarensis
ENSEBUG00000003854	-	59	35.345	ENSGAFG00000020426	si:ch1073-157b13.1	70	35.115	Gambusia_affinis
ENSEBUG00000003854	-	62	39.024	ENSGGOG00000005371	MEPCE	73	39.024	Gorilla_gorilla
ENSEBUG00000003854	-	62	38.750	ENSHGLG00000011263	MEPCE	51	38.750	Heterocephalus_glaber_female
ENSEBUG00000003854	-	62	38.750	ENSHGLG00100016274	MEPCE	55	38.750	Heterocephalus_glaber_male
ENSEBUG00000003854	-	60	32.174	ENSHCOG00000009246	-	66	31.760	Hippocampus_comes
ENSEBUG00000003854	-	59	40.000	ENSIPUG00000003387	si:ch1073-157b13.1	50	40.650	Ictalurus_punctatus
ENSEBUG00000003854	-	63	39.634	ENSSTOG00000007568	MEPCE	50	39.634	Ictidomys_tridecemlineatus
ENSEBUG00000003854	-	62	38.750	ENSJJAG00000010924	Mepce	52	38.750	Jaculus_jaculus
ENSEBUG00000003854	-	59	32.836	ENSKMAG00000007072	-	58	32.500	Kryptolebias_marmoratus
ENSEBUG00000003854	-	63	39.634	ENSLAFG00000012347	MEPCE	50	39.634	Loxodonta_africana
ENSEBUG00000003854	-	62	39.024	ENSMFAG00000003007	MEPCE	50	39.024	Macaca_fascicularis
ENSEBUG00000003854	-	62	39.024	ENSMMUG00000012724	MEPCE	50	39.024	Macaca_mulatta
ENSEBUG00000003854	-	62	39.024	ENSMNEG00000038460	MEPCE	50	39.024	Macaca_nemestrina
ENSEBUG00000003854	-	62	39.024	ENSMLEG00000043318	MEPCE	73	39.024	Mandrillus_leucophaeus
ENSEBUG00000003854	-	62	40.123	ENSMAUG00000001456	Mepce	57	40.123	Mesocricetus_auratus
ENSEBUG00000003854	-	62	39.506	ENSMOCG00000015013	Mepce	51	39.506	Microtus_ochrogaster
ENSEBUG00000003854	-	58	36.029	ENSMMOG00000011072	-	66	36.620	Mola_mola
ENSEBUG00000003854	-	62	38.272	ENSMODG00000004457	MEPCE	50	38.272	Monodelphis_domestica
ENSEBUG00000003854	-	69	37.654	MGP_CAROLIEiJ_G0027892	Mepce	65	42.857	Mus_caroli
ENSEBUG00000003854	-	62	37.654	ENSMUSG00000029726	Mepce	65	42.857	Mus_musculus
ENSEBUG00000003854	-	62	37.654	MGP_SPRETEiJ_G0028897	Mepce	65	42.857	Mus_spretus
ENSEBUG00000003854	-	62	38.889	ENSNGAG00000007098	Mepce	57	38.889	Nannospalax_galili
ENSEBUG00000003854	-	62	38.272	ENSODEG00000016662	MEPCE	51	38.272	Octodon_degus
ENSEBUG00000003854	-	59	32.061	ENSONIG00000009135	-	62	31.795	Oreochromis_niloticus
ENSEBUG00000003854	-	76	36.275	ENSOGAG00000034770	MEPCE	55	36.275	Otolemur_garnettii
ENSEBUG00000003854	-	68	39.024	ENSOARG00000016948	MEPCE	55	38.889	Ovis_aries
ENSEBUG00000003854	-	62	39.024	ENSPTRG00000019487	MEPCE	50	39.024	Pan_troglodytes
ENSEBUG00000003854	-	62	39.024	ENSPTRG00000050679	-	50	39.024	Pan_troglodytes
ENSEBUG00000003854	-	62	39.024	ENSPANG00000022874	MEPCE	50	39.024	Papio_anubis
ENSEBUG00000003854	-	53	42.241	ENSPMGG00000021503	-	71	39.706	Periophthalmus_magnuspinnatus
ENSEBUG00000003854	-	62	38.272	ENSPEMG00000003157	Mepce	51	38.272	Peromyscus_maniculatus_bairdii
ENSEBUG00000003854	-	62	38.272	ENSPCIG00000012285	MEPCE	54	42.857	Phascolarctos_cinereus
ENSEBUG00000003854	-	58	39.130	ENSPFOG00000016062	si:ch1073-157b13.1	75	38.095	Poecilia_formosa
ENSEBUG00000003854	-	58	39.130	ENSPLAG00000017448	si:ch1073-157b13.1	68	38.462	Poecilia_latipinna
ENSEBUG00000003854	-	58	38.793	ENSPMEG00000003971	si:ch1073-157b13.1	66	39.837	Poecilia_mexicana
ENSEBUG00000003854	-	63	40.244	ENSPCOG00000020884	MEPCE	50	40.244	Propithecus_coquereli
ENSEBUG00000003854	-	58	33.036	ENSPNYG00000001274	-	66	34.043	Pundamilia_nyererei
ENSEBUG00000003854	-	62	38.889	ENSRNOG00000045911	Mepce	51	38.889	Rattus_norvegicus
ENSEBUG00000003854	-	62	38.889	ENSRNOG00000001387	LOC100910540	51	38.889	Rattus_norvegicus
ENSEBUG00000003854	-	62	39.024	ENSRBIG00000027050	MEPCE	55	39.024	Rhinopithecus_bieti
ENSEBUG00000003854	-	62	39.024	ENSRROG00000031225	MEPCE	50	39.024	Rhinopithecus_roxellana
ENSEBUG00000003854	-	62	39.024	ENSSBOG00000011382	MEPCE	73	39.024	Saimiri_boliviensis_boliviensis
ENSEBUG00000003854	-	56	36.275	ENSSDUG00000006422	-	60	36.275	Seriola_dumerili
ENSEBUG00000003854	-	60	34.783	ENSSLDG00000019673	-	84	34.532	Seriola_lalandi_dorsalis
ENSEBUG00000003854	-	75	37.368	ENSSARG00000003253	MEPCE	57	38.272	Sorex_araneus
ENSEBUG00000003854	-	69	37.805	ENSUMAG00000010719	MEPCE	66	37.805	Ursus_maritimus
ENSEBUG00000003854	-	69	38.415	ENSVVUG00000023418	MEPCE	54	38.415	Vulpes_vulpes
ENSEBUG00000003854	-	59	37.069	ENSXCOG00000013140	-	65	36.641	Xiphophorus_couchianus
ENSEBUG00000003854	-	63	34.783	ENSXMAG00000016250	si:ch1073-157b13.1	68	36.154	Xiphophorus_maculatus