EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000003857 (Gene tree)
Gene ID
-
Gene Symbol
zgc:162239
Alias
-
Full Name
zgc:162239
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Minus strand
Length
53560 bases
Position
chrFYBX02010517.1:897696-951255
Accession
ZDB-GENE-070424-28
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000005737MMR_HSR1PF01926.233.1e-0711
ENSEBUP00000005713MMR_HSR1PF01926.233.3e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000006156-2384-ENSEBUP00000005713346 (aa)--
ENSEBUT00000006180-1184-ENSEBUP00000005737361 (aa)--
Gene Model
Click here to download ENSEBUG00000003857's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003857's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000003857zgc:1622398446.416ENSEBUG00000008442sept125545.017
ENSEBUG00000003857zgc:1622398647.492ENSEBUG00000006208sept7a9146.488
ENSEBUG00000003857zgc:1622399554.493ENSEBUG00000009786-9854.783
ENSEBUG00000003857zgc:1622399354.925ENSEBUG00000006082sept27453.913
ENSEBUG00000003857zgc:1622399233.533ENSEBUG00000003985SEPT118432.615
ENSEBUG00000003857zgc:1622399646.821ENSEBUG00000016403sept158146.821
ENSEBUG00000003857zgc:1622399045.833ENSEBUG00000015741sept9b9445.079
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000003857zgc:1622399755.278ENSG00000108387SEPT48668.000Homo_sapiens
ENSEBUG00000003857zgc:1622399753.760ENSAPOG00000017596sept4a7653.482Acanthochromis_polyacanthus
ENSEBUG00000003857zgc:1622399254.678ENSAPOG00000004169SEPT49953.509Acanthochromis_polyacanthus
ENSEBUG00000003857zgc:1622399755.833ENSAMEG00000011592SEPT46254.722Ailuropoda_melanoleuca
ENSEBUG00000003857zgc:1622399657.313ENSACIG00000018748sept4a9554.783Amphilophus_citrinellus
ENSEBUG00000003857zgc:1622399357.784ENSACIG00000002675SEPT48456.587Amphilophus_citrinellus
ENSEBUG00000003857zgc:1622399654.622ENSAOCG00000015851sept4a8755.405Amphiprion_ocellaris
ENSEBUG00000003857zgc:1622398563.051ENSAOCG00000008228SEPT47861.695Amphiprion_ocellaris
ENSEBUG00000003857zgc:1622399754.039ENSAPEG00000017422sept4a7653.760Amphiprion_percula
ENSEBUG00000003857zgc:1622398563.051ENSAPEG00000013889SEPT47661.695Amphiprion_percula
ENSEBUG00000003857zgc:1622399654.062ENSATEG00000007945sept4a7653.221Anabas_testudineus
ENSEBUG00000003857zgc:1622399755.710ENSATEG00000010484SEPT49952.568Anabas_testudineus
ENSEBUG00000003857zgc:1622399653.409ENSACAG00000010754-9752.557Anolis_carolinensis
ENSEBUG00000003857zgc:1622399755.278ENSANAG00000032288-8668.212Aotus_nancymaae
ENSEBUG00000003857zgc:1622399745.682ENSANAG00000028439-9348.421Aotus_nancymaae
ENSEBUG00000003857zgc:1622399755.125ENSACLG00000007242sept4a7354.017Astatotilapia_calliptera
ENSEBUG00000003857zgc:1622398953.172ENSACLG00000020556SEPT49951.964Astatotilapia_calliptera
ENSEBUG00000003857zgc:1622399756.145ENSAMXG00000020058sept4a8055.028Astyanax_mexicanus
ENSEBUG00000003857zgc:1622398554.237ENSAMXG00000031256zgc:1622399253.559Astyanax_mexicanus
ENSEBUG00000003857zgc:1622398953.776ENSAMXG00000037346SEPT49952.568Astyanax_mexicanus
ENSEBUG00000003857zgc:1622399755.000ENSBTAG00000015368SEPT49953.889Bos_taurus
ENSEBUG00000003857zgc:1622399757.224ENSCAFG00020025931SEPT49556.091Canis_lupus_dingo
ENSEBUG00000003857zgc:1622399754.848ENSCHIG00000024623SEPT47553.740Capra_hircus
ENSEBUG00000003857zgc:1622399756.111ENSTSYG00000007856SEPT48668.000Carlito_syrichta
ENSEBUG00000003857zgc:1622399655.618ENSCPOG00000003438SEPT49461.695Cavia_porcellus
ENSEBUG00000003857zgc:1622399755.833ENSCCAG00000033722SEPT49261.733Cebus_capucinus
ENSEBUG00000003857zgc:1622399755.556ENSCLAG00000012112SEPT49462.034Chinchilla_lanigera
ENSEBUG00000003857zgc:1622399755.556ENSCSAG00000005775SEPT47554.444Chlorocebus_sabaeus
ENSEBUG00000003857zgc:1622399754.722ENSCPBG00000015911SEPT47753.889Chrysemys_picta_bellii
ENSEBUG00000003857zgc:1622399755.278ENSCANG00000043093SEPT48668.000Colobus_angolensis_palliatus
ENSEBUG00000003857zgc:1622399755.556ENSCGRG00001020635Sept49462.034Cricetulus_griseus_chok1gshd
ENSEBUG00000003857zgc:1622399755.556ENSCGRG00000016009Sept47554.444Cricetulus_griseus_crigri
ENSEBUG00000003857zgc:1622398062.590ENSCSEG00000009655SEPT47661.151Cynoglossus_semilaevis
ENSEBUG00000003857zgc:1622399755.028ENSCVAG00000021688SEPT410051.964Cyprinodon_variegatus
ENSEBUG00000003857zgc:1622399754.318ENSCVAG00000005954-9754.054Cyprinodon_variegatus
ENSEBUG00000003857zgc:1622399754.722ENSDARG00000010385sept4a7553.611Danio_rerio
ENSEBUG00000003857zgc:1622396051.442ENSDARG00000019651zgc:1622397151.980Danio_rerio
ENSEBUG00000003857zgc:1622399954.121ENSDARG00000105271SEPT48653.022Danio_rerio
ENSEBUG00000003857zgc:1622399755.556ENSDORG00000001966Sept49462.034Dipodomys_ordii
ENSEBUG00000003857zgc:1622399755.556ENSETEG00000013398SEPT410054.444Echinops_telfairi
ENSEBUG00000003857zgc:1622399755.833ENSEASG00005002775SEPT47854.722Equus_asinus_asinus
ENSEBUG00000003857zgc:1622399352.096ENSELUG00000006608-8753.153Esox_lucius
ENSEBUG00000003857zgc:1622399754.749ENSELUG00000007982SEPT49951.662Esox_lucius
ENSEBUG00000003857zgc:1622399654.875ENSELUG00000006509sept4a7253.760Esox_lucius
ENSEBUG00000003857zgc:1622399755.556ENSFCAG00000004488SEPT410052.711Felis_catus
ENSEBUG00000003857zgc:1622398562.712ENSFALG00000013797SEPT46361.695Ficedula_albicollis
ENSEBUG00000003857zgc:1622399755.833ENSFDAG00000014745SEPT49554.722Fukomys_damarensis
ENSEBUG00000003857zgc:1622398953.776ENSFHEG00000021445SEPT49952.568Fundulus_heteroclitus
ENSEBUG00000003857zgc:1622399555.963ENSFHEG00000000567sept4a9754.493Fundulus_heteroclitus
ENSEBUG00000003857zgc:1622399649.300ENSGMOG00000007005sept4a8748.459Gadus_morhua
ENSEBUG00000003857zgc:1622398343.750ENSGMOG00000007022-9743.403Gadus_morhua
ENSEBUG00000003857zgc:1622398562.373ENSGMOG00000011574SEPT46061.017Gadus_morhua
ENSEBUG00000003857zgc:1622399755.000ENSGALG00000035185SEPT47554.722Gallus_gallus
ENSEBUG00000003857zgc:1622398561.356ENSGAFG00000001757sept4a6360.339Gambusia_affinis
ENSEBUG00000003857zgc:1622398953.474ENSGAFG00000010509SEPT49952.568Gambusia_affinis
ENSEBUG00000003857zgc:1622399757.612ENSGACG00000020488sept4a9557.313Gasterosteus_aculeatus
ENSEBUG00000003857zgc:1622399753.911ENSGACG00000008792SEPT47453.631Gasterosteus_aculeatus
ENSEBUG00000003857zgc:1622398661.953ENSGAGG00000005922SEPT45660.943Gopherus_agassizii
ENSEBUG00000003857zgc:1622399757.817ENSHBUG00000005988sept4a9753.521Haplochromis_burtoni
ENSEBUG00000003857zgc:1622398562.712ENSHBUG00000001102SEPT49951.964Haplochromis_burtoni
ENSEBUG00000003857zgc:1622399755.556ENSHGLG00000007661SEPT49462.034Heterocephalus_glaber_female
ENSEBUG00000003857zgc:1622399755.866ENSHGLG00100011068SEPT49554.749Heterocephalus_glaber_male
ENSEBUG00000003857zgc:1622398452.069ENSHCOG00000009438sept4a8954.696Hippocampus_comes
ENSEBUG00000003857zgc:1622398059.928ENSHCOG00000016706SEPT47559.567Hippocampus_comes
ENSEBUG00000003857zgc:1622399655.932ENSIPUG00000008070SEPT4a6855.932Ictalurus_punctatus
ENSEBUG00000003857zgc:1622399258.663ENSIPUG00000007470SEPT48960.090Ictalurus_punctatus
ENSEBUG00000003857zgc:1622396454.751ENSIPUG00000007941zgc:1622398459.690Ictalurus_punctatus
ENSEBUG00000003857zgc:1622399755.278ENSSTOG00000028582SEPT49461.695Ictidomys_tridecemlineatus
ENSEBUG00000003857zgc:1622399755.556ENSJJAG00000022351Sept49462.034Jaculus_jaculus
ENSEBUG00000003857zgc:1622399755.278ENSKMAG00000015750SEPT49654.167Kryptolebias_marmoratus
ENSEBUG00000003857zgc:1622399754.875ENSKMAG00000006586sept4a8461.356Kryptolebias_marmoratus
ENSEBUG00000003857zgc:1622398953.636ENSLBEG00000026675SEPT49952.121Labrus_bergylta
ENSEBUG00000003857zgc:1622399854.622ENSLBEG00000000185sept4a9753.782Labrus_bergylta
ENSEBUG00000003857zgc:1622399754.596ENSLACG00000018670SEPT48853.482Latimeria_chalumnae
ENSEBUG00000003857zgc:1622396462.896ENSLOCG00000004398sept4a6961.086Lepisosteus_oculatus
ENSEBUG00000003857zgc:1622399755.278ENSLAFG00000003381SEPT47554.167Loxodonta_africana
ENSEBUG00000003857zgc:1622398953.939ENSMAMG00000009320SEPT49952.727Mastacembelus_armatus
ENSEBUG00000003857zgc:1622399655.742ENSMAMG00000020986sept4a6854.622Mastacembelus_armatus
ENSEBUG00000003857zgc:1622399657.612ENSMZEG00005024888sept4a9954.662Maylandia_zebra
ENSEBUG00000003857zgc:1622398562.712ENSMZEG00005015238SEPT49061.356Maylandia_zebra
ENSEBUG00000003857zgc:1622398562.712ENSMGAG00000002059SEPT48461.695Meleagris_gallopavo
ENSEBUG00000003857zgc:1622399755.556ENSMAUG00000018468Sept49462.034Mesocricetus_auratus
ENSEBUG00000003857zgc:1622399755.556ENSMICG00000016062SEPT48668.000Microcebus_murinus
ENSEBUG00000003857zgc:1622399755.278ENSMOCG00000022414Sept49461.695Microtus_ochrogaster
ENSEBUG00000003857zgc:1622399254.386ENSMMOG00000011919SEPT49953.216Mola_mola
ENSEBUG00000003857zgc:1622399751.955ENSMMOG00000011577sept4a9951.327Mola_mola
ENSEBUG00000003857zgc:1622399552.975ENSMMOG00000004005-9551.841Mola_mola
ENSEBUG00000003857zgc:1622399756.936ENSMALG00000004418SEPT49754.830Monopterus_albus
ENSEBUG00000003857zgc:1622399755.556MGP_CAROLIEiJ_G0016931Sept48762.871Mus_caroli
ENSEBUG00000003857zgc:1622399755.556ENSMUSG00000020486Sept49462.034Mus_musculus
ENSEBUG00000003857zgc:1622399755.556MGP_PahariEiJ_G0018060Sept48762.871Mus_pahari
ENSEBUG00000003857zgc:1622399755.556MGP_SPRETEiJ_G0017778Sept49462.034Mus_spretus
ENSEBUG00000003857zgc:1622399754.722ENSMLUG00000029785SEPT46153.611Myotis_lucifugus
ENSEBUG00000003857zgc:1622399755.556ENSNGAG00000000527Sept49462.034Nannospalax_galili
ENSEBUG00000003857zgc:1622398461.856ENSNBRG00000002328sept4a9260.825Neolamprologus_brichardi
ENSEBUG00000003857zgc:1622398562.712ENSNBRG00000008584SEPT46061.356Neolamprologus_brichardi
ENSEBUG00000003857zgc:1622399755.556ENSODEG00000011244SEPT49462.034Octodon_degus
ENSEBUG00000003857zgc:1622399755.125ENSONIG00000008732sept4a9354.294Oreochromis_niloticus
ENSEBUG00000003857zgc:1622399655.056ENSONIG00000008130SEPT48253.933Oreochromis_niloticus
ENSEBUG00000003857zgc:1622399755.833ENSOCUG00000009757SEPT47554.722Oryctolagus_cuniculus
ENSEBUG00000003857zgc:1622398953.474ENSORLG00000007856SEPT49952.266Oryzias_latipes
ENSEBUG00000003857zgc:1622399653.501ENSORLG00000002766sept4a7852.661Oryzias_latipes
ENSEBUG00000003857zgc:1622399653.501ENSORLG00020016855sept4a8052.661Oryzias_latipes_hni
ENSEBUG00000003857zgc:1622398954.079ENSORLG00020000643SEPT49952.870Oryzias_latipes_hni
ENSEBUG00000003857zgc:1622399653.501ENSORLG00015001204sept4a8052.661Oryzias_latipes_hsok
ENSEBUG00000003857zgc:1622398953.474ENSORLG00015002602SEPT49952.266Oryzias_latipes_hsok
ENSEBUG00000003857zgc:1622398953.474ENSOMEG00000016432SEPT49952.266Oryzias_melastigma
ENSEBUG00000003857zgc:1622399654.622ENSOMEG00000009047sept4a7053.782Oryzias_melastigma
ENSEBUG00000003857zgc:1622399755.587ENSOGAG00000004928SEPT47554.469Otolemur_garnettii
ENSEBUG00000003857zgc:1622399756.111ENSPPRG00000022781SEPT48469.388Panthera_pardus
ENSEBUG00000003857zgc:1622399756.111ENSPTIG00000014205SEPT410053.313Panthera_tigris_altaica
ENSEBUG00000003857zgc:1622399755.278ENSPANG00000022286SEPT49361.348Papio_anubis
ENSEBUG00000003857zgc:1622399254.386ENSPKIG00000005907SEPT49953.216Paramormyrops_kingsleyae
ENSEBUG00000003857zgc:1622398561.017ENSPKIG00000018498sept4a6659.661Paramormyrops_kingsleyae
ENSEBUG00000003857zgc:1622397356.589ENSPSIG00000014354-7055.426Pelodiscus_sinensis
ENSEBUG00000003857zgc:1622398852.665ENSPMGG00000005528sept4a9851.724Periophthalmus_magnuspinnatus
ENSEBUG00000003857zgc:1622399844.044ENSPMGG00000021141SEPT47743.767Periophthalmus_magnuspinnatus
ENSEBUG00000003857zgc:1622399755.556ENSPEMG00000015994Sept49462.034Peromyscus_maniculatus_bairdii
ENSEBUG00000003857zgc:1622399750.552ENSPMAG00000003139zgc:1622399550.829Petromyzon_marinus
ENSEBUG00000003857zgc:1622399654.494ENSPCIG00000015596SEPT47853.652Phascolarctos_cinereus
ENSEBUG00000003857zgc:1622399754.039ENSPFOG00000010456sept4a7353.203Poecilia_formosa
ENSEBUG00000003857zgc:1622399654.902ENSPFOG00000015200SEPT47553.933Poecilia_formosa
ENSEBUG00000003857zgc:1622399755.307ENSPLAG00000000023SEPT49952.266Poecilia_latipinna
ENSEBUG00000003857zgc:1622399756.765ENSPLAG00000019026sept4a9265.385Poecilia_latipinna
ENSEBUG00000003857zgc:1622399753.760ENSPMEG00000014050sept4a7553.203Poecilia_mexicana
ENSEBUG00000003857zgc:1622399755.307ENSPMEG00000014632SEPT49952.266Poecilia_mexicana
ENSEBUG00000003857zgc:1622399754.596ENSPREG00000008912sept4a7053.760Poecilia_reticulata
ENSEBUG00000003857zgc:1622398952.568ENSPREG00000022047SEPT49951.360Poecilia_reticulata
ENSEBUG00000003857zgc:1622399755.278ENSPPYG00000008229SEPT47554.167Pongo_abelii
ENSEBUG00000003857zgc:1622399755.833ENSPCOG00000024780SEPT48668.000Propithecus_coquereli
ENSEBUG00000003857zgc:1622399754.167ENSPVAG00000002325SEPT47553.056Pteropus_vampyrus
ENSEBUG00000003857zgc:1622398662.838ENSPNYG00000016710SEPT46761.486Pundamilia_nyererei
ENSEBUG00000003857zgc:1622399757.817ENSPNYG00000018040sept4a9952.564Pundamilia_nyererei
ENSEBUG00000003857zgc:1622398553.220ENSPNAG00000015185zgc:1622398553.082Pygocentrus_nattereri
ENSEBUG00000003857zgc:1622399755.307ENSPNAG00000015089sept4a8661.986Pygocentrus_nattereri
ENSEBUG00000003857zgc:1622398062.230ENSPNAG00000007157SEPT48160.791Pygocentrus_nattereri
ENSEBUG00000003857zgc:1622399755.556ENSRNOG00000007367Sept49665.132Rattus_norvegicus
ENSEBUG00000003857zgc:1622399755.278ENSRBIG00000027007SEPT48668.000Rhinopithecus_bieti
ENSEBUG00000003857zgc:1622399755.278ENSRROG00000031893SEPT48668.000Rhinopithecus_roxellana
ENSEBUG00000003857zgc:1622399755.833ENSSBOG00000021401SEPT49361.702Saimiri_boliviensis_boliviensis
ENSEBUG00000003857zgc:1622399653.371ENSSHAG00000010070SEPT47452.809Sarcophilus_harrisii
ENSEBUG00000003857zgc:1622399754.749ENSSFOG00015006345sept4a7853.631Scleropages_formosus
ENSEBUG00000003857zgc:1622399755.153ENSSFOG00015002137SEPT47954.039Scleropages_formosus
ENSEBUG00000003857zgc:1622399757.391ENSSMAG00000016821SEPT49756.069Scophthalmus_maximus
ENSEBUG00000003857zgc:1622399753.463ENSSMAG00000019627sept4a7052.632Scophthalmus_maximus
ENSEBUG00000003857zgc:1622398563.390ENSSDUG00000020367SEPT49952.266Seriola_dumerili
ENSEBUG00000003857zgc:1622399756.213ENSSDUG00000017913sept4a9654.762Seriola_dumerili
ENSEBUG00000003857zgc:1622399253.779ENSSLDG00000021047SEPT49952.616Seriola_lalandi_dorsalis
ENSEBUG00000003857zgc:1622398561.356ENSSLDG00000015580sept4a5460.339Seriola_lalandi_dorsalis
ENSEBUG00000003857zgc:1622399755.587ENSSARG00000012784SEPT47554.469Sorex_araneus
ENSEBUG00000003857zgc:1622399854.571ENSSPUG00000000871-9753.611Sphenodon_punctatus
ENSEBUG00000003857zgc:1622399655.556ENSSPAG00000008751sept4a9654.655Stegastes_partitus
ENSEBUG00000003857zgc:1622397761.798ENSSPAG00000004946SEPT47360.300Stegastes_partitus
ENSEBUG00000003857zgc:1622399755.556ENSSSCG00000017643SEPT49554.444Sus_scrofa
ENSEBUG00000003857zgc:1622399754.469ENSTRUG00000015731SEPT48853.352Takifugu_rubripes
ENSEBUG00000003857zgc:1622399754.294ENSTNIG00000005815SEPT49452.909Tetraodon_nigroviridis
ENSEBUG00000003857zgc:1622399855.372ENSTNIG00000003311sept4a9054.270Tetraodon_nigroviridis
ENSEBUG00000003857zgc:1622398853.963ENSTBEG00000010153SEPT46852.744Tupaia_belangeri
ENSEBUG00000003857zgc:1622399750.556ENSTTRG00000006853SEPT47950.556Tursiops_truncatus
ENSEBUG00000003857zgc:1622399755.833ENSUAMG00000005181SEPT47854.722Ursus_americanus
ENSEBUG00000003857zgc:1622399755.833ENSUMAG00000022793SEPT49554.722Ursus_maritimus
ENSEBUG00000003857zgc:1622397364.427ENSVPAG00000001810SEPT45362.846Vicugna_pacos
ENSEBUG00000003857zgc:1622399755.833ENSVVUG00000012618SEPT48961.356Vulpes_vulpes
ENSEBUG00000003857zgc:1622399651.955ENSXETG00000030625SEPT49351.397Xenopus_tropicalis
ENSEBUG00000003857zgc:1622399757.440ENSXCOG00000012748SEPT49456.250Xiphophorus_couchianus
ENSEBUG00000003857zgc:1622399754.310ENSXCOG00000007196sept4a9065.584Xiphophorus_couchianus
ENSEBUG00000003857zgc:1622399757.307ENSXMAG00000008630SEPT49952.568Xiphophorus_maculatus
ENSEBUG00000003857zgc:1622398660.269ENSXMAG00000011277sept4a7459.259Xiphophorus_maculatus

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