EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: DKFZp564O176|FLJ30012|HQ0256|RRP3
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 23685 bases
Position: chrFYBX02009422.1:2821704-2845388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005799	ResIII	PF04851.15	1.5e-05	1	1
ENSEBUP00000005799	DEAD	PF00270.29	8.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006244	-	1551	-	ENSEBUP00000005799	281 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003908	-	69	33.000	ENSEBUG00000004479	ddx20	63	33.333
ENSEBUG00000003908	-	68	34.536	ENSEBUG00000010042	ddx39aa	53	34.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003908	-	69	85.641	ENSG00000213782	DDX47	67	79.612	Homo_sapiens
ENSEBUG00000003908	-	69	85.641	ENSANAG00000025235	DDX47	53	85.641	Aotus_nancymaae
ENSEBUG00000003908	-	67	87.302	ENSCJAG00000021633	DDX47	75	85.641	Callithrix_jacchus
ENSEBUG00000003908	-	75	79.147	ENSTSYG00000002978	DDX47	52	79.147	Carlito_syrichta
ENSEBUG00000003908	-	52	86.301	ENSCAPG00000002814	DDX47	58	86.301	Cavia_aperea
ENSEBUG00000003908	-	75	79.147	ENSCATG00000038188	-	84	79.147	Cercocebus_atys
ENSEBUG00000003908	-	69	85.641	ENSMNEG00000044164	DDX47	52	85.641	Macaca_nemestrina
ENSEBUG00000003908	-	69	84.615	ENSMLEG00000037204	-	68	84.615	Mandrillus_leucophaeus
ENSEBUG00000003908	-	73	53.398	ENSMZEG00005022989	-	54	53.398	Maylandia_zebra
ENSEBUG00000003908	-	55	74.839	ENSMICG00000044024	-	69	74.839	Microcebus_murinus
ENSEBUG00000003908	-	71	83.000	MGP_CAROLIEiJ_G0028986	Ddx47	70	78.641	Mus_caroli
ENSEBUG00000003908	-	71	83.500	ENSMUSG00000030204	Ddx47	70	78.641	Mus_musculus
ENSEBUG00000003908	-	69	85.128	MGP_PahariEiJ_G0022748	Ddx47	67	78.641	Mus_pahari
ENSEBUG00000003908	-	71	83.500	MGP_SPRETEiJ_G0030034	Ddx47	70	78.641	Mus_spretus
ENSEBUG00000003908	-	82	73.707	ENSPLAG00000014318	ddx47	50	74.009	Poecilia_latipinna
ENSEBUG00000003908	-	69	84.615	ENSSARG00000007535	DDX47	65	84.615	Sorex_araneus
ENSEBUG00000003908	-	69	85.128	ENSUMAG00000002358	DDX47	54	85.128	Ursus_maritimus