EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003964 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 167355 bases
Position: chrFYBX02010228.1:7170559-7337913
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000005927	RRM_1	PF00076.22	4.3e-26	1	2
ENSEBUP00000005927	RRM_1	PF00076.22	4.3e-26	2	2
ENSEBUP00000005913	RRM_1	PF00076.22	5.5e-26	1	2
ENSEBUP00000005913	RRM_1	PF00076.22	5.5e-26	2	2
ENSEBUP00000005941	RRM_1	PF00076.22	7.5e-26	1	2
ENSEBUP00000005941	RRM_1	PF00076.22	7.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006374	-	2006	-	ENSEBUP00000005927	556 (aa)	-	-
ENSEBUT00000006387	-	3663	-	ENSEBUP00000005941	682 (aa)	-	-
ENSEBUT00000006359	-	2376	-	ENSEBUP00000005913	607 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003964	-	62	72.254	ENSG00000121390	PSPC1	82	73.313	Homo_sapiens
ENSEBUG00000003964	-	64	67.313	ENSAPOG00000015946	pspc1	79	62.440	Acanthochromis_polyacanthus
ENSEBUG00000003964	-	62	72.254	ENSAMEG00000017420	PSPC1	88	59.298	Ailuropoda_melanoleuca
ENSEBUG00000003964	-	73	48.465	ENSACIG00000018695	pspc1	90	46.457	Amphilophus_citrinellus
ENSEBUG00000003964	-	64	66.482	ENSAOCG00000005279	pspc1	79	61.722	Amphiprion_ocellaris
ENSEBUG00000003964	-	64	66.482	ENSAPEG00000015927	pspc1	79	61.722	Amphiprion_percula
ENSEBUG00000003964	-	61	60.651	ENSATEG00000004878	pspc1	92	44.074	Anabas_testudineus
ENSEBUG00000003964	-	66	69.022	ENSAPLG00000003643	SFPQ	76	65.909	Anas_platyrhynchos
ENSEBUG00000003964	-	52	71.080	ENSAPLG00000006246	PSPC1	100	55.869	Anas_platyrhynchos
ENSEBUG00000003964	-	65	70.278	ENSACAG00000002093	PSPC1	90	57.341	Anolis_carolinensis
ENSEBUG00000003964	-	63	69.318	ENSACAG00000013307	-	65	62.708	Anolis_carolinensis
ENSEBUG00000003964	-	62	72.254	ENSANAG00000000059	PSPC1	82	70.859	Aotus_nancymaae
ENSEBUG00000003964	-	65	57.219	ENSACLG00000027220	pspc1	90	46.800	Astatotilapia_calliptera
ENSEBUG00000003964	-	64	66.942	ENSAMXG00000036881	pspc1	90	56.301	Astyanax_mexicanus
ENSEBUG00000003964	-	62	72.464	ENSBTAG00000003934	PSPC1	88	56.818	Bos_taurus
ENSEBUG00000003964	-	62	72.254	ENSCJAG00000004554	PSPC1	88	59.504	Callithrix_jacchus
ENSEBUG00000003964	-	62	72.254	ENSCAFG00020002009	PSPC1	82	73.313	Canis_lupus_dingo
ENSEBUG00000003964	-	62	72.464	ENSCHIG00000016708	PSPC1	88	56.818	Capra_hircus
ENSEBUG00000003964	-	53	62.126	ENSTSYG00000032882	PSPC1	93	47.748	Carlito_syrichta
ENSEBUG00000003964	-	62	72.464	ENSCPOG00000000395	PSPC1	83	73.313	Cavia_porcellus
ENSEBUG00000003964	-	62	72.254	ENSCCAG00000033498	PSPC1	88	59.091	Cebus_capucinus
ENSEBUG00000003964	-	62	72.254	ENSCATG00000036434	PSPC1	89	73.538	Cercocebus_atys
ENSEBUG00000003964	-	51	73.498	ENSCLAG00000005241	PSPC1	100	53.653	Chinchilla_lanigera
ENSEBUG00000003964	-	59	72.424	ENSCHOG00000008913	PSPC1	88	56.757	Choloepus_hoffmanni
ENSEBUG00000003964	-	65	68.975	ENSCPBG00000020859	PSPC1	90	56.800	Chrysemys_picta_bellii
ENSEBUG00000003964	-	56	59.744	ENSCSAVG00000003533	-	80	45.319	Ciona_savignyi
ENSEBUG00000003964	-	55	51.445	ENSCANG00000018948	PSPC1	87	74.621	Colobus_angolensis_palliatus
ENSEBUG00000003964	-	62	72.464	ENSCGRG00001018368	Pspc1	88	59.504	Cricetulus_griseus_chok1gshd
ENSEBUG00000003964	-	62	72.464	ENSCGRG00000011724	Pspc1	88	59.504	Cricetulus_griseus_crigri
ENSEBUG00000003964	-	73	51.982	ENSCVAG00000007679	-	90	51.012	Cyprinodon_variegatus
ENSEBUG00000003964	-	69	65.544	ENSDARG00000006621	pspc1	98	57.468	Danio_rerio
ENSEBUG00000003964	-	63	71.429	ENSDNOG00000011078	PSPC1	88	58.884	Dasypus_novemcinctus
ENSEBUG00000003964	-	62	69.275	ENSDORG00000016050	Pspc1	88	57.495	Dipodomys_ordii
ENSEBUG00000003964	-	62	72.464	ENSEASG00005000119	PSPC1	83	73.313	Equus_asinus_asinus
ENSEBUG00000003964	-	62	72.464	ENSECAG00000017286	PSPC1	83	73.313	Equus_caballus
ENSEBUG00000003964	-	73	62.836	ENSELUG00000003746	pspc1	87	56.855	Esox_lucius
ENSEBUG00000003964	-	62	72.464	ENSFCAG00000027841	PSPC1	82	73.313	Felis_catus
ENSEBUG00000003964	-	65	69.529	ENSFALG00000008750	PSPC1	89	57.000	Ficedula_albicollis
ENSEBUG00000003964	-	62	72.254	ENSFDAG00000002617	PSPC1	90	59.091	Fukomys_damarensis
ENSEBUG00000003964	-	62	65.217	ENSGMOG00000015074	pspc1	84	56.854	Gadus_morhua
ENSEBUG00000003964	-	62	71.014	ENSGALG00000017142	PSPC1	90	57.000	Gallus_gallus
ENSEBUG00000003964	-	61	62.108	ENSGAFG00000006327	pspc1	59	71.875	Gambusia_affinis
ENSEBUG00000003964	-	62	63.478	ENSGACG00000014901	pspc1	87	66.881	Gasterosteus_aculeatus
ENSEBUG00000003964	-	61	72.647	ENSGAGG00000017325	-	65	62.972	Gopherus_agassizii
ENSEBUG00000003964	-	65	68.975	ENSGAGG00000019164	PSPC1	90	56.800	Gopherus_agassizii
ENSEBUG00000003964	-	62	72.254	ENSGGOG00000003414	PSPC1	82	73.313	Gorilla_gorilla
ENSEBUG00000003964	-	82	52.516	ENSHBUG00000001139	pspc1	91	53.862	Haplochromis_burtoni
ENSEBUG00000003964	-	62	72.464	ENSHGLG00000018811	PSPC1	88	59.091	Heterocephalus_glaber_female
ENSEBUG00000003964	-	52	75.433	ENSHGLG00100007962	PSPC1	87	76.140	Heterocephalus_glaber_male
ENSEBUG00000003964	-	62	65.797	ENSHCOG00000013251	pspc1	86	61.183	Hippocampus_comes
ENSEBUG00000003964	-	74	63.171	ENSIPUG00000013192	pspc1	88	59.329	Ictalurus_punctatus
ENSEBUG00000003964	-	62	72.254	ENSSTOG00000026833	PSPC1	82	73.313	Ictidomys_tridecemlineatus
ENSEBUG00000003964	-	62	72.254	ENSJJAG00000018334	Pspc1	88	59.298	Jaculus_jaculus
ENSEBUG00000003964	-	52	61.246	ENSKMAG00000013525	-	67	60.137	Kryptolebias_marmoratus
ENSEBUG00000003964	-	72	59.398	ENSLBEG00000004474	pspc1	91	47.257	Labrus_bergylta
ENSEBUG00000003964	-	61	73.156	ENSLACG00000010762	PSPC1	88	58.058	Latimeria_chalumnae
ENSEBUG00000003964	-	62	73.623	ENSLOCG00000010832	pspc1	90	60.408	Lepisosteus_oculatus
ENSEBUG00000003964	-	62	72.254	ENSLAFG00000010968	PSPC1	88	59.298	Loxodonta_africana
ENSEBUG00000003964	-	62	72.254	ENSMFAG00000032728	PSPC1	90	73.394	Macaca_fascicularis
ENSEBUG00000003964	-	62	72.254	ENSMMUG00000020262	PSPC1	87	73.313	Macaca_mulatta
ENSEBUG00000003964	-	62	72.254	ENSMNEG00000027401	PSPC1	86	65.926	Macaca_nemestrina
ENSEBUG00000003964	-	51	73.498	ENSMLEG00000039043	PSPC1	94	57.820	Mandrillus_leucophaeus
ENSEBUG00000003964	-	63	67.045	ENSMAMG00000004333	pspc1	87	51.441	Mastacembelus_armatus
ENSEBUG00000003964	-	65	57.219	ENSMZEG00005005726	pspc1	90	46.800	Maylandia_zebra
ENSEBUG00000003964	-	52	70.934	ENSMGAG00000015134	PSPC1	100	55.841	Meleagris_gallopavo
ENSEBUG00000003964	-	62	67.246	ENSMAUG00000021067	Pspc1	86	59.360	Mesocricetus_auratus
ENSEBUG00000003964	-	62	72.254	ENSMICG00000013970	PSPC1	82	73.313	Microcebus_murinus
ENSEBUG00000003964	-	62	72.254	ENSMOCG00000006060	Pspc1	88	59.091	Microtus_ochrogaster
ENSEBUG00000003964	-	62	72.174	ENSMODG00000008029	PSPC1	66	61.871	Monodelphis_domestica
ENSEBUG00000003964	-	62	63.768	ENSMALG00000008914	pspc1	89	53.830	Monopterus_albus
ENSEBUG00000003964	-	62	72.254	MGP_CAROLIEiJ_G0019341	Pspc1	86	64.428	Mus_caroli
ENSEBUG00000003964	-	62	72.254	ENSMUSG00000021938	Pspc1	86	64.428	Mus_musculus
ENSEBUG00000003964	-	62	72.254	MGP_PahariEiJ_G0030359	Pspc1	86	64.428	Mus_pahari
ENSEBUG00000003964	-	62	72.254	MGP_SPRETEiJ_G0020232	Pspc1	86	64.428	Mus_spretus
ENSEBUG00000003964	-	62	72.254	ENSMPUG00000013347	PSPC1	88	59.298	Mustela_putorius_furo
ENSEBUG00000003964	-	62	71.552	ENSMLUG00000017663	PSPC1	88	58.727	Myotis_lucifugus
ENSEBUG00000003964	-	62	72.254	ENSNGAG00000011271	Pspc1	88	59.138	Nannospalax_galili
ENSEBUG00000003964	-	67	53.887	ENSNBRG00000014059	pspc1	67	66.667	Neolamprologus_brichardi
ENSEBUG00000003964	-	62	72.254	ENSNLEG00000001294	PSPC1	88	59.298	Nomascus_leucogenys
ENSEBUG00000003964	-	62	58.960	ENSODEG00000007817	-	88	46.735	Octodon_degus
ENSEBUG00000003964	-	62	66.474	ENSODEG00000019012	-	88	53.926	Octodon_degus
ENSEBUG00000003964	-	82	53.173	ENSONIG00000012010	pspc1	90	53.465	Oreochromis_niloticus
ENSEBUG00000003964	-	64	58.028	ENSOANG00000011381	-	95	47.714	Ornithorhynchus_anatinus
ENSEBUG00000003964	-	51	73.145	ENSOANG00000009017	-	100	57.109	Ornithorhynchus_anatinus
ENSEBUG00000003964	-	62	72.254	ENSOCUG00000006153	PSPC1	88	59.711	Oryctolagus_cuniculus
ENSEBUG00000003964	-	63	65.625	ENSORLG00000004232	-	91	52.579	Oryzias_latipes
ENSEBUG00000003964	-	63	65.341	ENSORLG00020000578	PSPC1	82	58.295	Oryzias_latipes_hni
ENSEBUG00000003964	-	61	67.847	ENSORLG00015017480	pspc1	91	52.778	Oryzias_latipes_hsok
ENSEBUG00000003964	-	62	72.254	ENSOGAG00000012643	PSPC1	88	59.298	Otolemur_garnettii
ENSEBUG00000003964	-	62	69.164	ENSOARG00000014163	PSPC1	94	57.113	Ovis_aries
ENSEBUG00000003964	-	59	73.313	ENSPPAG00000009836	PSPC1	91	73.538	Pan_paniscus
ENSEBUG00000003964	-	62	72.464	ENSPPRG00000008833	PSPC1	88	59.298	Panthera_pardus
ENSEBUG00000003964	-	54	70.333	ENSPTIG00000016917	PSPC1	86	56.492	Panthera_tigris_altaica
ENSEBUG00000003964	-	62	72.254	ENSPTRG00000005677	PSPC1	82	73.313	Pan_troglodytes
ENSEBUG00000003964	-	62	72.254	ENSPANG00000001992	PSPC1	89	73.394	Papio_anubis
ENSEBUG00000003964	-	62	72.464	ENSPKIG00000003578	pspc1	88	59.544	Paramormyrops_kingsleyae
ENSEBUG00000003964	-	65	68.421	ENSPSIG00000005168	PSPC1	90	56.548	Pelodiscus_sinensis
ENSEBUG00000003964	-	64	59.066	ENSPMGG00000015135	pspc1	86	65.273	Periophthalmus_magnuspinnatus
ENSEBUG00000003964	-	62	72.254	ENSPEMG00000015214	Pspc1	88	59.298	Peromyscus_maniculatus_bairdii
ENSEBUG00000003964	-	62	71.965	ENSPCIG00000017680	PSPC1	88	59.091	Phascolarctos_cinereus
ENSEBUG00000003964	-	72	61.538	ENSPFOG00000003362	pspc1	92	55.227	Poecilia_formosa
ENSEBUG00000003964	-	72	61.538	ENSPLAG00000011540	pspc1	91	55.227	Poecilia_latipinna
ENSEBUG00000003964	-	81	58.316	ENSPLAG00000004407	-	56	62.500	Poecilia_latipinna
ENSEBUG00000003964	-	72	61.538	ENSPMEG00000008322	pspc1	91	55.227	Poecilia_mexicana
ENSEBUG00000003964	-	81	56.432	ENSPMEG00000001025	-	52	65.416	Poecilia_mexicana
ENSEBUG00000003964	-	72	61.042	ENSPREG00000007786	pspc1	91	54.635	Poecilia_reticulata
ENSEBUG00000003964	-	62	72.254	ENSPPYG00000005186	PSPC1	86	65.610	Pongo_abelii
ENSEBUG00000003964	-	62	70.725	ENSPCOG00000014364	PSPC1	87	58.017	Propithecus_coquereli
ENSEBUG00000003964	-	62	72.174	ENSPVAG00000005036	PSPC1	88	58.969	Pteropus_vampyrus
ENSEBUG00000003964	-	82	48.511	ENSPNYG00000008893	pspc1	90	46.800	Pundamilia_nyererei
ENSEBUG00000003964	-	62	71.014	ENSPNAG00000016511	pspc1	87	62.255	Pygocentrus_nattereri
ENSEBUG00000003964	-	62	72.254	ENSRNOG00000020782	Pspc1	86	66.169	Rattus_norvegicus
ENSEBUG00000003964	-	62	72.464	ENSRBIG00000036057	PSPC1	90	73.313	Rhinopithecus_bieti
ENSEBUG00000003964	-	62	72.254	ENSRROG00000036334	PSPC1	82	73.313	Rhinopithecus_roxellana
ENSEBUG00000003964	-	50	71.841	ENSSBOG00000028172	PSPC1	89	73.162	Saimiri_boliviensis_boliviensis
ENSEBUG00000003964	-	62	65.517	ENSSHAG00000004696	PSPC1	88	52.066	Sarcophilus_harrisii
ENSEBUG00000003964	-	62	72.543	ENSSFOG00015001395	pspc1	99	60.041	Scleropages_formosus
ENSEBUG00000003964	-	70	59.039	ENSSMAG00000001761	pspc1	92	52.601	Scophthalmus_maximus
ENSEBUG00000003964	-	62	67.246	ENSSDUG00000010651	pspc1	74	62.779	Seriola_dumerili
ENSEBUG00000003964	-	78	50.740	ENSSLDG00000004284	pspc1	91	47.741	Seriola_lalandi_dorsalis
ENSEBUG00000003964	-	62	64.740	ENSSARG00000000888	PSPC1	88	51.653	Sorex_araneus
ENSEBUG00000003964	-	61	63.824	ENSSPUG00000001136	-	68	51.429	Sphenodon_punctatus
ENSEBUG00000003964	-	50	71.071	ENSSPUG00000008550	PSPC1	89	49.701	Sphenodon_punctatus
ENSEBUG00000003964	-	64	65.922	ENSSPAG00000001921	pspc1	77	61.446	Stegastes_partitus
ENSEBUG00000003964	-	62	72.254	ENSSSCG00000009569	PSPC1	83	73.313	Sus_scrofa
ENSEBUG00000003964	-	62	70.809	ENSTGUG00000011295	PSPC1	99	57.645	Taeniopygia_guttata
ENSEBUG00000003964	-	76	55.819	ENSTRUG00000011335	pspc1	82	54.608	Takifugu_rubripes
ENSEBUG00000003964	-	76	54.739	ENSTNIG00000010358	pspc1	90	52.371	Tetraodon_nigroviridis
ENSEBUG00000003964	-	63	64.943	ENSTBEG00000002361	PSPC1	65	66.667	Tupaia_belangeri
ENSEBUG00000003964	-	62	72.464	ENSTTRG00000003343	PSPC1	88	59.298	Tursiops_truncatus
ENSEBUG00000003964	-	52	75.517	ENSUAMG00000012309	PSPC1	81	76.408	Ursus_americanus
ENSEBUG00000003964	-	62	71.965	ENSUMAG00000013993	PSPC1	90	73.006	Ursus_maritimus
ENSEBUG00000003964	-	51	73.498	ENSVPAG00000010029	PSPC1	100	57.583	Vicugna_pacos
ENSEBUG00000003964	-	62	72.254	ENSVVUG00000006414	PSPC1	84	73.313	Vulpes_vulpes
ENSEBUG00000003964	-	61	61.538	ENSXCOG00000017438	pspc1	72	67.097	Xiphophorus_couchianus
ENSEBUG00000003964	-	61	61.823	ENSXMAG00000007929	pspc1	72	67.419	Xiphophorus_maculatus