EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSEBUG00000004109 (Gene tree)
Gene ID: -
Gene Symbol: snrnp40
Alias: wdr57|zgc:56312
Full Name: small nuclear ribonucleoprotein 40 (U5)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 37181 bases
Position: chrFYBX02010201.1:612642-649822
Accession: ZDB-GENE-040426-978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006171	eIF2A	PF08662.11	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006621	-	4025	-	ENSEBUP00000006171	348 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004109	snrnp40	96	32.945	ENSEBUG00000004448	wdr5	98	32.945
ENSEBUG00000004109	snrnp40	87	31.250	ENSEBUG00000002614	POC1A	67	31.250
ENSEBUG00000004109	snrnp40	81	33.621	ENSEBUG00000003526	tbl3	74	33.621
ENSEBUG00000004109	snrnp40	89	30.597	ENSEBUG00000008013	poc1a	83	30.137