EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000004221 (Gene tree)
Gene ID
-
Gene Symbol
thumpd3
Alias
cb255|sb:cb255|zgc:163086
Full Name
THUMP domain containing 3
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Minus strand
Length
36028 bases
Position
chrFYBX02009548.1:3357816-3393843
Accession
ZDB-GENE-030131-9745
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000006442THUMPPF02926.172.3e-1411
ENSEBUP00000006393THUMPPF02926.172.4e-1411
ENSEBUP00000006442UPF0020PF01170.189.5e-3911
ENSEBUP00000006393UPF0020PF01170.182e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000006848-4190-ENSEBUP00000006393423 (aa)--
ENSEBUT00000006898-1344-ENSEBUP00000006442447 (aa)--
Gene Model
Click here to download ENSEBUG00000004221's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004221's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000004221thumpd35131.696ENSEBUG00000010906THUMPD26431.696
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000004221thumpd39553.759ENSG00000134077THUMPD38653.759Homo_sapiens
ENSEBUG00000004221thumpd39752.294ENSAPOG00000015836thumpd38852.392Acanthochromis_polyacanthus
ENSEBUG00000004221thumpd39553.741ENSAMEG00000011321THUMPD38753.741Ailuropoda_melanoleuca
ENSEBUG00000004221thumpd39751.778ENSACIG00000020096thumpd38652.847Amphilophus_citrinellus
ENSEBUG00000004221thumpd39751.835ENSAOCG00000004399thumpd38651.835Amphiprion_ocellaris
ENSEBUG00000004221thumpd39751.481ENSAPEG00000016740thumpd38651.253Amphiprion_percula
ENSEBUG00000004221thumpd39752.164ENSATEG00000005345thumpd38752.392Anabas_testudineus
ENSEBUG00000004221thumpd38851.899ENSAPLG00000003598THUMPD39953.061Anas_platyrhynchos
ENSEBUG00000004221thumpd39550.980ENSACAG00000014974THUMPD38851.316Anolis_carolinensis
ENSEBUG00000004221thumpd39553.515ENSANAG00000002365THUMPD38753.759Aotus_nancymaae
ENSEBUG00000004221thumpd39836.854ENSACLG00000013504-9436.854Astatotilapia_calliptera
ENSEBUG00000004221thumpd39752.392ENSACLG00000023333thumpd38652.392Astatotilapia_calliptera
ENSEBUG00000004221thumpd35030.000ENSACLG00000025840thumpd27631.579Astatotilapia_calliptera
ENSEBUG00000004221thumpd39752.262ENSAMXG00000015683thumpd39152.262Astyanax_mexicanus
ENSEBUG00000004221thumpd39553.531ENSBTAG00000003112THUMPD38753.531Bos_taurus
ENSEBUG00000004221thumpd38834.761WBGene00010846M04B2.28835.013Caenorhabditis_elegans
ENSEBUG00000004221thumpd39553.846ENSCJAG00000015949THUMPD38753.846Callithrix_jacchus
ENSEBUG00000004221thumpd38230.000ENSCAFG00000006471THUMPD27030.000Canis_familiaris
ENSEBUG00000004221thumpd38652.713ENSCAFG00000008060-9352.972Canis_familiaris
ENSEBUG00000004221thumpd39553.378ENSCAFG00000005499THUMPD38753.378Canis_familiaris
ENSEBUG00000004221thumpd38230.000ENSCAFG00020021695THUMPD27530.000Canis_lupus_dingo
ENSEBUG00000004221thumpd39553.378ENSCAFG00020008895-8753.378Canis_lupus_dingo
ENSEBUG00000004221thumpd39252.555ENSCAFG00020025887-9452.941Canis_lupus_dingo
ENSEBUG00000004221thumpd39553.303ENSCHIG00000024037THUMPD38653.303Capra_hircus
ENSEBUG00000004221thumpd39551.927ENSTSYG00000000159THUMPD38751.927Carlito_syrichta
ENSEBUG00000004221thumpd37031.250ENSTSYG00000010555THUMPD26931.250Carlito_syrichta
ENSEBUG00000004221thumpd36645.390ENSCAPG00000017486THUMPD35445.390Cavia_aperea
ENSEBUG00000004221thumpd39552.273ENSCPOG00000033287THUMPD38752.273Cavia_porcellus
ENSEBUG00000004221thumpd39548.736ENSCCAG00000021429-8948.276Cebus_capucinus
ENSEBUG00000004221thumpd39553.288ENSCCAG00000027067-8753.531Cebus_capucinus
ENSEBUG00000004221thumpd37030.263ENSCATG00000012396THUMPD26930.263Cercocebus_atys
ENSEBUG00000004221thumpd39554.214ENSCATG00000040999THUMPD38754.214Cercocebus_atys
ENSEBUG00000004221thumpd39553.303ENSCLAG00000000690THUMPD38752.370Chinchilla_lanigera
ENSEBUG00000004221thumpd39554.214ENSCSAG00000010753THUMPD38754.214Chlorocebus_sabaeus
ENSEBUG00000004221thumpd35032.444ENSCSAG00000012431THUMPD25132.444Chlorocebus_sabaeus
ENSEBUG00000004221thumpd38044.355ENSCHOG00000012851THUMPD37044.355Choloepus_hoffmanni
ENSEBUG00000004221thumpd39551.007ENSCPBG00000014771THUMPD38851.007Chrysemys_picta_bellii
ENSEBUG00000004221thumpd39538.140ENSCSAVG00000008668-9238.140Ciona_savignyi
ENSEBUG00000004221thumpd39553.759ENSCANG00000031901THUMPD38753.759Colobus_angolensis_palliatus
ENSEBUG00000004221thumpd39553.075ENSCGRG00001024117Thumpd38752.489Cricetulus_griseus_chok1gshd
ENSEBUG00000004221thumpd39553.075ENSCGRG00000018116Thumpd38752.489Cricetulus_griseus_crigri
ENSEBUG00000004221thumpd39951.106ENSCSEG00000002546thumpd39051.106Cynoglossus_semilaevis
ENSEBUG00000004221thumpd39950.820ENSCVAG00000001019thumpd38552.164Cyprinodon_variegatus
ENSEBUG00000004221thumpd39749.887ENSDARG00000059634thumpd39150.688Danio_rerio
ENSEBUG00000004221thumpd39553.167ENSDNOG00000047668THUMPD38850.402Dasypus_novemcinctus
ENSEBUG00000004221thumpd39552.902ENSDORG00000003257Thumpd38752.928Dipodomys_ordii
ENSEBUG00000004221thumpd36248.780ENSETEG00000020239-5648.780Echinops_telfairi
ENSEBUG00000004221thumpd39551.351ENSEASG00005013327THUMPD38750.901Equus_asinus_asinus
ENSEBUG00000004221thumpd39553.829ENSECAG00000002016THUMPD38753.378Equus_caballus
ENSEBUG00000004221thumpd39549.436ENSEEUG00000014696THUMPD38749.436Erinaceus_europaeus
ENSEBUG00000004221thumpd37962.835ENSELUG00000018246thumpd36362.835Esox_lucius
ENSEBUG00000004221thumpd39554.091ENSFCAG00000006171THUMPD38754.091Felis_catus
ENSEBUG00000004221thumpd38853.717ENSFALG00000013631THUMPD38753.717Ficedula_albicollis
ENSEBUG00000004221thumpd39552.834ENSFDAG00000014825THUMPD38752.727Fukomys_damarensis
ENSEBUG00000004221thumpd39750.998ENSFHEG00000006006thumpd38750.998Fundulus_heteroclitus
ENSEBUG00000004221thumpd39750.901ENSGMOG00000007923thumpd38851.701Gadus_morhua
ENSEBUG00000004221thumpd35232.479ENSGALG00000009119THUMPD25332.479Gallus_gallus
ENSEBUG00000004221thumpd39551.220ENSGALG00000044813THUMPD39151.220Gallus_gallus
ENSEBUG00000004221thumpd35831.890ENSGAFG00000012683thumpd25630.556Gambusia_affinis
ENSEBUG00000004221thumpd39752.715ENSGAFG00000021645thumpd38652.715Gambusia_affinis
ENSEBUG00000004221thumpd39751.454ENSGACG00000000930thumpd39151.454Gasterosteus_aculeatus
ENSEBUG00000004221thumpd39550.331ENSGAGG00000022750THUMPD38850.559Gopherus_agassizii
ENSEBUG00000004221thumpd39553.759ENSGGOG00000000604THUMPD38653.759Gorilla_gorilla
ENSEBUG00000004221thumpd39752.392ENSHBUG00000013405thumpd38652.392Haplochromis_burtoni
ENSEBUG00000004221thumpd39752.349ENSHGLG00000016200THUMPD38852.796Heterocephalus_glaber_female
ENSEBUG00000004221thumpd39446.420ENSHGLG00100000505-8846.189Heterocephalus_glaber_male
ENSEBUG00000004221thumpd39753.258ENSHGLG00100017321-8853.258Heterocephalus_glaber_male
ENSEBUG00000004221thumpd39752.608ENSHCOG00000004871thumpd39053.394Hippocampus_comes
ENSEBUG00000004221thumpd39751.136ENSIPUG00000019415THUMPD38951.136Ictalurus_punctatus
ENSEBUG00000004221thumpd39554.157ENSSTOG00000003973THUMPD38754.157Ictidomys_tridecemlineatus
ENSEBUG00000004221thumpd39549.543ENSJJAG00000017751Thumpd38549.543Jaculus_jaculus
ENSEBUG00000004221thumpd39852.242ENSKMAG00000021025thumpd38252.242Kryptolebias_marmoratus
ENSEBUG00000004221thumpd39951.786ENSLBEG00000012252thumpd38752.009Labrus_bergylta
ENSEBUG00000004221thumpd39550.450ENSLACG00000018604THUMPD38750.676Latimeria_chalumnae
ENSEBUG00000004221thumpd39749.257ENSLOCG00000009800thumpd39150.334Lepisosteus_oculatus
ENSEBUG00000004221thumpd39552.392ENSLAFG00000005103THUMPD38752.392Loxodonta_africana
ENSEBUG00000004221thumpd39953.187ENSMFAG00000044884THUMPD38853.187Macaca_fascicularis
ENSEBUG00000004221thumpd39953.187ENSMMUG00000017307THUMPD38853.187Macaca_mulatta
ENSEBUG00000004221thumpd39953.187ENSMNEG00000030529THUMPD38853.187Macaca_nemestrina
ENSEBUG00000004221thumpd39554.214ENSMLEG00000032943THUMPD38753.741Mandrillus_leucophaeus
ENSEBUG00000004221thumpd39752.511ENSMAMG00000023934thumpd38752.018Mastacembelus_armatus
ENSEBUG00000004221thumpd39752.392ENSMZEG00005010623thumpd38652.392Maylandia_zebra
ENSEBUG00000004221thumpd39050.864ENSMGAG00000010182THUMPD310052.130Meleagris_gallopavo
ENSEBUG00000004221thumpd39552.847ENSMAUG00000012250Thumpd38753.167Mesocricetus_auratus
ENSEBUG00000004221thumpd39749.469ENSMICG00000010095THUMPD38949.469Microcebus_murinus
ENSEBUG00000004221thumpd39552.403ENSMOCG00000020148Thumpd38652.955Microtus_ochrogaster
ENSEBUG00000004221thumpd39752.184ENSMMOG00000021791thumpd39053.089Mola_mola
ENSEBUG00000004221thumpd39552.655ENSMODG00000004715-8752.655Monodelphis_domestica
ENSEBUG00000004221thumpd39553.613ENSMALG00000017316thumpd38953.613Monopterus_albus
ENSEBUG00000004221thumpd35747.955MGP_CAROLIEiJ_G0028714-5548.327Mus_caroli
ENSEBUG00000004221thumpd38231.165ENSMUSG00000024246Thumpd26731.165Mus_musculus
ENSEBUG00000004221thumpd39751.556ENSMUSG00000030264Thumpd38951.876Mus_musculus
ENSEBUG00000004221thumpd38230.541MGP_PahariEiJ_G0020902Thumpd26730.541Mus_pahari
ENSEBUG00000004221thumpd39751.225MGP_PahariEiJ_G0022465Thumpd38951.549Mus_pahari
ENSEBUG00000004221thumpd39751.556MGP_SPRETEiJ_G0029742Thumpd38951.876Mus_spretus
ENSEBUG00000004221thumpd38230.541MGP_SPRETEiJ_G0022828Thumpd26730.541Mus_spretus
ENSEBUG00000004221thumpd39554.442ENSMPUG00000017066-8754.442Mustela_putorius_furo
ENSEBUG00000004221thumpd39550.000ENSMPUG00000005219-8650.000Mustela_putorius_furo
ENSEBUG00000004221thumpd39651.663ENSMLUG00000008538THUMPD38751.656Myotis_lucifugus
ENSEBUG00000004221thumpd39542.523ENSNGAG00000001549-8542.593Nannospalax_galili
ENSEBUG00000004221thumpd39552.715ENSNGAG00000021014-8752.715Nannospalax_galili
ENSEBUG00000004221thumpd38230.163ENSNGAG00000016396Thumpd26930.163Nannospalax_galili
ENSEBUG00000004221thumpd39752.620ENSNBRG00000004886thumpd38652.620Neolamprologus_brichardi
ENSEBUG00000004221thumpd39553.759ENSNLEG00000003863THUMPD38753.759Nomascus_leucogenys
ENSEBUG00000004221thumpd39551.429ENSMEUG00000009819THUMPD39951.667Notamacropus_eugenii
ENSEBUG00000004221thumpd39451.773ENSOPRG00000002020THUMPD39952.257Ochotona_princeps
ENSEBUG00000004221thumpd37952.022ENSODEG00000018242THUMPD310052.222Octodon_degus
ENSEBUG00000004221thumpd39752.847ENSONIG00000018977thumpd38652.847Oreochromis_niloticus
ENSEBUG00000004221thumpd35630.085ENSONIG00000001165thumpd25230.213Oreochromis_niloticus
ENSEBUG00000004221thumpd39050.985ENSOANG00000014481THUMPD39651.478Ornithorhynchus_anatinus
ENSEBUG00000004221thumpd39553.741ENSOCUG00000010921THUMPD38753.717Oryctolagus_cuniculus
ENSEBUG00000004221thumpd39754.195ENSORLG00000000676thumpd38854.195Oryzias_latipes
ENSEBUG00000004221thumpd36232.609ENSORLG00020018792thumpd25832.971Oryzias_latipes_hni
ENSEBUG00000004221thumpd39754.195ENSORLG00020007509thumpd38854.195Oryzias_latipes_hni
ENSEBUG00000004221thumpd39754.195ENSORLG00015003615thumpd38854.195Oryzias_latipes_hsok
ENSEBUG00000004221thumpd39752.982ENSOMEG00000014115thumpd38753.899Oryzias_melastigma
ENSEBUG00000004221thumpd39150.864ENSOGAG00000017111THUMPD39851.724Otolemur_garnettii
ENSEBUG00000004221thumpd39553.394ENSOARG00000007139THUMPD38453.394Ovis_aries
ENSEBUG00000004221thumpd39553.986ENSPPAG00000025852THUMPD38653.986Pan_paniscus
ENSEBUG00000004221thumpd39554.091ENSPPRG00000008071THUMPD38754.091Panthera_pardus
ENSEBUG00000004221thumpd39554.091ENSPTIG00000017923THUMPD38754.091Panthera_tigris_altaica
ENSEBUG00000004221thumpd39554.214ENSPTRG00000014585THUMPD38654.214Pan_troglodytes
ENSEBUG00000004221thumpd39554.214ENSPANG00000016253THUMPD38754.214Papio_anubis
ENSEBUG00000004221thumpd39751.902ENSPKIG00000014009thumpd38951.902Paramormyrops_kingsleyae
ENSEBUG00000004221thumpd39551.002ENSPSIG00000007370THUMPD38850.670Pelodiscus_sinensis
ENSEBUG00000004221thumpd39752.860ENSPMGG00000017563thumpd39052.860Periophthalmus_magnuspinnatus
ENSEBUG00000004221thumpd39552.466ENSPEMG00000022411Thumpd38752.466Peromyscus_maniculatus_bairdii
ENSEBUG00000004221thumpd39552.620ENSPMAG00000001291thumpd39552.765Petromyzon_marinus
ENSEBUG00000004221thumpd39553.741ENSPCIG00000002049THUMPD38653.741Phascolarctos_cinereus
ENSEBUG00000004221thumpd39752.955ENSPFOG00000002318thumpd38652.955Poecilia_formosa
ENSEBUG00000004221thumpd39752.727ENSPLAG00000014804thumpd38652.727Poecilia_latipinna
ENSEBUG00000004221thumpd39752.727ENSPMEG00000000582thumpd38652.727Poecilia_mexicana
ENSEBUG00000004221thumpd35332.018ENSPMEG00000009573-5531.102Poecilia_mexicana
ENSEBUG00000004221thumpd35232.287ENSPREG00000001603THUMPD25232.328Poecilia_reticulata
ENSEBUG00000004221thumpd39753.034ENSPREG00000009176thumpd38653.034Poecilia_reticulata
ENSEBUG00000004221thumpd39538.785ENSPPYG00000017616-8738.785Pongo_abelii
ENSEBUG00000004221thumpd39554.214ENSPPYG00000029461THUMPD38754.214Pongo_abelii
ENSEBUG00000004221thumpd37031.023ENSPPYG00000012470THUMPD26931.023Pongo_abelii
ENSEBUG00000004221thumpd39351.887ENSPCAG00000015398THUMPD39951.887Procavia_capensis
ENSEBUG00000004221thumpd38449.361ENSPCOG00000023618-8850.127Propithecus_coquereli
ENSEBUG00000004221thumpd39544.191ENSPCOG00000018095-8645.701Propithecus_coquereli
ENSEBUG00000004221thumpd39553.515ENSPVAG00000008721THUMPD38753.515Pteropus_vampyrus
ENSEBUG00000004221thumpd39752.392ENSPNYG00000006918thumpd38652.392Pundamilia_nyererei
ENSEBUG00000004221thumpd39951.415ENSPNAG00000014936thumpd38951.364Pygocentrus_nattereri
ENSEBUG00000004221thumpd39552.608ENSRNOG00000006941Thumpd38752.834Rattus_norvegicus
ENSEBUG00000004221thumpd39554.214ENSRBIG00000035954THUMPD38754.214Rhinopithecus_bieti
ENSEBUG00000004221thumpd39553.986ENSRROG00000035734THUMPD38753.986Rhinopithecus_roxellana
ENSEBUG00000004221thumpd39553.303ENSSBOG00000023567THUMPD38953.364Saimiri_boliviensis_boliviensis
ENSEBUG00000004221thumpd39552.941ENSSHAG00000014467THUMPD38752.955Sarcophilus_harrisii
ENSEBUG00000004221thumpd39752.834ENSSFOG00015019210thumpd38852.834Scleropages_formosus
ENSEBUG00000004221thumpd39751.345ENSSMAG00000000609thumpd39051.345Scophthalmus_maximus
ENSEBUG00000004221thumpd39750.676ENSSDUG00000012179thumpd39050.450Seriola_dumerili
ENSEBUG00000004221thumpd39750.676ENSSLDG00000022028thumpd38750.676Seriola_lalandi_dorsalis
ENSEBUG00000004221thumpd39642.141ENSSARG00000002239THUMPD38742.141Sorex_araneus
ENSEBUG00000004221thumpd39551.111ENSSPUG00000017461THUMPD38851.333Sphenodon_punctatus
ENSEBUG00000004221thumpd39752.523ENSSPAG00000008345thumpd38552.523Stegastes_partitus
ENSEBUG00000004221thumpd39552.620ENSSSCG00000011542THUMPD38752.620Sus_scrofa
ENSEBUG00000004221thumpd39554.005ENSTGUG00000010440THUMPD39754.005Taeniopygia_guttata
ENSEBUG00000004221thumpd39250.508ENSTRUG00000004420thumpd39050.508Takifugu_rubripes
ENSEBUG00000004221thumpd39951.461ENSTNIG00000014627thumpd39451.685Tetraodon_nigroviridis
ENSEBUG00000004221thumpd39549.887ENSTBEG00000003450THUMPD38649.887Tupaia_belangeri
ENSEBUG00000004221thumpd39553.986ENSTTRG00000009694THUMPD38654.214Tursiops_truncatus
ENSEBUG00000004221thumpd39553.950ENSUAMG00000009412THUMPD38753.950Ursus_americanus
ENSEBUG00000004221thumpd39554.167ENSUMAG00000019241THUMPD38654.545Ursus_maritimus
ENSEBUG00000004221thumpd37950.949ENSVPAG00000002855THUMPD38850.949Vicugna_pacos
ENSEBUG00000004221thumpd39553.378ENSVVUG00000025278THUMPD38753.378Vulpes_vulpes
ENSEBUG00000004221thumpd38230.000ENSVVUG00000018628THUMPD27530.000Vulpes_vulpes
ENSEBUG00000004221thumpd39552.477ENSXETG00000001447thumpd38652.915Xenopus_tropicalis
ENSEBUG00000004221thumpd39752.596ENSXCOG00000000159thumpd39052.596Xiphophorus_couchianus
ENSEBUG00000004221thumpd39752.370ENSXMAG00000001423thumpd38652.370Xiphophorus_maculatus
ENSEBUG00000004221thumpd35832.031ENSXMAG00000017249thumpd25031.295Xiphophorus_maculatus

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