EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004292 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 3877 bases
Position: chrFYBX02008326.1:160363-164239
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006509	RRM_1	PF00076.22	9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006965	-	1665	-	ENSEBUP00000006509	554 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004292	-	76	56.410	ENSEBUG00000010930	-	86	57.674
ENSEBUG00000004292	-	99	30.744	ENSEBUG00000016806	rbm12	99	31.749
ENSEBUG00000004292	-	100	49.746	ENSEBUG00000009015	-	100	49.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004292	-	84	33.818	ENSAPOG00000013963	rbm12b	77	33.818	Acanthochromis_polyacanthus
ENSEBUG00000004292	-	72	35.238	ENSAPOG00000008836	zgc:153215	87	35.238	Acanthochromis_polyacanthus
ENSEBUG00000004292	-	68	30.688	ENSACIG00000014943	rbm12b	98	30.688	Amphilophus_citrinellus
ENSEBUG00000004292	-	60	34.615	ENSACIG00000013317	zgc:153215	69	34.615	Amphilophus_citrinellus
ENSEBUG00000004292	-	92	32.765	ENSAOCG00000024270	rbm12b	82	32.765	Amphiprion_ocellaris
ENSEBUG00000004292	-	52	32.877	ENSAPEG00000022079	rbm12b	87	32.877	Amphiprion_percula
ENSEBUG00000004292	-	91	31.655	ENSAPLG00000002020	RBM12B	88	31.210	Anas_platyrhynchos
ENSEBUG00000004292	-	87	33.466	ENSCPBG00000003061	RBM12B	80	33.466	Chrysemys_picta_bellii
ENSEBUG00000004292	-	82	32.157	ENSGAGG00000009774	RBM12B	75	32.157	Gopherus_agassizii
ENSEBUG00000004292	-	88	34.831	ENSIPUG00000001167	RBM12B	79	34.831	Ictalurus_punctatus
ENSEBUG00000004292	-	64	30.392	ENSLBEG00000002597	zgc:153215	73	30.392	Labrus_bergylta
ENSEBUG00000004292	-	82	32.627	ENSORLG00000008228	rbm12b	72	32.627	Oryzias_latipes
ENSEBUG00000004292	-	82	32.627	ENSORLG00020013619	rbm12b	72	32.627	Oryzias_latipes_hni
ENSEBUG00000004292	-	82	32.627	ENSORLG00015019999	rbm12b	72	32.627	Oryzias_latipes_hsok
ENSEBUG00000004292	-	82	36.441	ENSOMEG00000022523	rbm12b	73	36.441	Oryzias_melastigma
ENSEBUG00000004292	-	72	30.020	ENSPKIG00000018719	rbm12b	70	30.020	Paramormyrops_kingsleyae
ENSEBUG00000004292	-	59	43.038	ENSPFOG00000017451	zgc:153215	62	43.038	Poecilia_formosa
ENSEBUG00000004292	-	72	38.806	ENSSARG00000011845	-	58	38.806	Sorex_araneus
ENSEBUG00000004292	-	54	46.269	ENSSPUG00000016954	RBM12B	66	46.269	Sphenodon_punctatus
ENSEBUG00000004292	-	88	32.740	ENSSPAG00000006774	rbm12b	81	32.740	Stegastes_partitus