EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 80158 bases
Position: chrFYBX02010221.1:3420967-3501124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006524	SID-1_RNA_chan	PF13965.6	6.7e-46	1	2
ENSEBUP00000006524	SID-1_RNA_chan	PF13965.6	6.7e-46	2	2
ENSEBUP00000006551	SID-1_RNA_chan	PF13965.6	6.7e-46	1	2
ENSEBUP00000006551	SID-1_RNA_chan	PF13965.6	6.7e-46	2	2
ENSEBUP00000006571	SID-1_RNA_chan	PF13965.6	6.7e-46	1	2
ENSEBUP00000006571	SID-1_RNA_chan	PF13965.6	6.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007008	-	1612	-	ENSEBUP00000006551	484 (aa)	-	-
ENSEBUT00000006981	-	1612	-	ENSEBUP00000006524	484 (aa)	-	-
ENSEBUT00000007028	-	1612	-	ENSEBUP00000006571	484 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004317	-	50	79.592	ENSEBUG00000002685	-	90	89.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004317	-	61	32.558	ENSG00000149577	SIDT2	64	33.028	Homo_sapiens
ENSEBUG00000004317	-	72	31.298	ENSCJAG00000020266	SIDT1	50	31.298	Callithrix_jacchus
ENSEBUG00000004317	-	71	32.061	ENSCATG00000037766	SIDT1	50	32.061	Cercocebus_atys
ENSEBUG00000004317	-	64	32.061	ENSCHOG00000012517	SIDT1	50	32.061	Choloepus_hoffmanni
ENSEBUG00000004317	-	79	32.061	ENSDNOG00000019812	SIDT1	52	32.061	Dasypus_novemcinctus
ENSEBUG00000004317	-	72	30.000	ENSETEG00000001903	SIDT1	50	30.000	Echinops_telfairi
ENSEBUG00000004317	-	79	34.109	ENSELUG00000009317	sidt2	51	33.333	Esox_lucius
ENSEBUG00000004317	-	78	31.538	ENSFCAG00000004872	SIDT1	51	31.538	Felis_catus
ENSEBUG00000004317	-	64	30.952	ENSFALG00000005134	SIDT1	51	30.769	Ficedula_albicollis
ENSEBUG00000004317	-	79	31.298	ENSGMOG00000004220	sidt2	51	34.351	Gadus_morhua
ENSEBUG00000004317	-	83	33.846	ENSLBEG00000012639	sidt2	52	33.846	Labrus_bergylta
ENSEBUG00000004317	-	69	33.846	ENSLAFG00000030954	SIDT2	61	33.846	Loxodonta_africana
ENSEBUG00000004317	-	71	32.824	ENSMFAG00000031280	SIDT1	61	30.357	Macaca_fascicularis
ENSEBUG00000004317	-	71	32.824	ENSMNEG00000037518	SIDT1	61	30.357	Macaca_nemestrina
ENSEBUG00000004317	-	78	32.824	ENSMPUG00000000291	SIDT1	50	32.824	Mustela_putorius_furo
ENSEBUG00000004317	-	71	32.824	ENSNLEG00000004593	SIDT1	51	32.824	Nomascus_leucogenys
ENSEBUG00000004317	-	59	34.615	ENSORLG00000015792	sidt2	54	30.282	Oryzias_latipes
ENSEBUG00000004317	-	72	31.298	ENSOGAG00000011173	SIDT1	50	31.298	Otolemur_garnettii
ENSEBUG00000004317	-	72	32.061	ENSPPAG00000040479	SIDT1	51	32.061	Pan_paniscus
ENSEBUG00000004317	-	77	30.769	ENSPPRG00000011442	SIDT1	50	30.769	Panthera_pardus
ENSEBUG00000004317	-	81	32.624	ENSPKIG00000000026	sidt2	52	31.429	Paramormyrops_kingsleyae
ENSEBUG00000004317	-	65	32.824	ENSPSIG00000016194	SIDT1	50	32.824	Pelodiscus_sinensis
ENSEBUG00000004317	-	78	31.298	ENSPVAG00000006146	SIDT1	50	31.298	Pteropus_vampyrus
ENSEBUG00000004317	-	79	31.818	ENSPNYG00000004561	sidt2	53	31.818	Pundamilia_nyererei
ENSEBUG00000004317	-	77	32.061	ENSTTRG00000000280	SIDT1	51	32.061	Tursiops_truncatus
ENSEBUG00000004317	-	74	32.824	ENSUAMG00000026447	SIDT1	54	32.824	Ursus_americanus
ENSEBUG00000004317	-	64	32.558	ENSVVUG00000024787	SIDT2	51	32.558	Vulpes_vulpes
ENSEBUG00000004317	-	78	31.061	ENSXETG00000033839	SIDT1	53	31.061	Xenopus_tropicalis