EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: SFRS3|SRp20
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 32633 bases
Position: chrFYBX02009815.1:4070711-4103343
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006553	RRM_1	PF00076.22	1.1e-18	1	1
ENSEBUP00000006542	RRM_1	PF00076.22	1.4e-18	1	1
ENSEBUP00000006529	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000006986	-	4331	-	ENSEBUP00000006529	221 (aa)	-	-
ENSEBUT00000007010	-	3650	-	ENSEBUP00000006553	187 (aa)	-	-
ENSEBUT00000006999	-	4304	-	ENSEBUP00000006542	212 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004324	-	86	62.941	ENSEBUG00000002677	-	74	69.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004324	-	51	81.250	ENSAPOG00000017845	srsf3b	62	80.583	Acanthochromis_polyacanthus
ENSEBUG00000004324	-	54	79.208	ENSACIG00000016419	-	66	79.208	Amphilophus_citrinellus
ENSEBUG00000004324	-	51	81.250	ENSAOCG00000022173	srsf3b	62	80.583	Amphiprion_ocellaris
ENSEBUG00000004324	-	51	81.250	ENSAPEG00000014876	srsf3b	82	80.583	Amphiprion_percula
ENSEBUG00000004324	-	72	62.500	ENSATEG00000006193	srsf3b	86	65.789	Anabas_testudineus
ENSEBUG00000004324	-	51	84.211	ENSANAG00000002046	-	58	84.211	Aotus_nancymaae
ENSEBUG00000004324	-	54	72.549	ENSANAG00000035091	-	89	72.277	Aotus_nancymaae
ENSEBUG00000004324	-	54	78.218	ENSACLG00000010873	-	63	78.218	Astatotilapia_calliptera
ENSEBUG00000004324	-	51	80.208	ENSACLG00000022561	srsf3b	65	79.612	Astatotilapia_calliptera
ENSEBUG00000004324	-	73	50.595	ENSAMXG00000001532	srsf7a	67	47.929	Astyanax_mexicanus
ENSEBUG00000004324	-	72	61.184	ENSAMXG00000008840	srsf3b	88	65.132	Astyanax_mexicanus
ENSEBUG00000004324	-	51	65.625	ENSCHIG00000019854	-	92	63.000	Capra_hircus
ENSEBUG00000004324	-	53	72.277	ENSCCAG00000025870	-	60	73.958	Cebus_capucinus
ENSEBUG00000004324	-	55	68.932	ENSCGRG00001022756	-	56	77.381	Cricetulus_griseus_chok1gshd
ENSEBUG00000004324	-	55	68.932	ENSCGRG00000017619	-	56	77.381	Cricetulus_griseus_crigri
ENSEBUG00000004324	-	55	79.612	ENSCSEG00000002271	srsf3b	78	79.612	Cynoglossus_semilaevis
ENSEBUG00000004324	-	51	81.250	ENSCVAG00000003851	srsf3b	82	79.612	Cyprinodon_variegatus
ENSEBUG00000004324	-	67	69.841	ENSELUG00000014357	SRSF3	59	81.250	Esox_lucius
ENSEBUG00000004324	-	56	79.808	ENSELUG00000002390	srsf3a	59	81.188	Esox_lucius
ENSEBUG00000004324	-	51	81.250	ENSFHEG00000005368	srsf3b	82	79.612	Fundulus_heteroclitus
ENSEBUG00000004324	-	58	61.739	ENSFHEG00000007159	srsf7a	86	55.245	Fundulus_heteroclitus
ENSEBUG00000004324	-	55	80.392	ENSGMOG00000008043	SRSF3	72	80.392	Gadus_morhua
ENSEBUG00000004324	-	68	71.318	ENSGAFG00000010130	-	79	80.198	Gambusia_affinis
ENSEBUG00000004324	-	72	61.184	ENSHBUG00000003073	srsf3b	82	79.612	Haplochromis_burtoni
ENSEBUG00000004324	-	54	79.208	ENSHBUG00000022402	-	60	79.208	Haplochromis_burtoni
ENSEBUG00000004324	-	53	76.768	ENSHCOG00000017795	-	77	67.442	Hippocampus_comes
ENSEBUG00000004324	-	72	61.842	ENSIPUG00000017382	srsf3	78	82.000	Ictalurus_punctatus
ENSEBUG00000004324	-	56	54.630	ENSJJAG00000020230	-	65	58.242	Jaculus_jaculus
ENSEBUG00000004324	-	75	59.375	ENSJJAG00000024246	-	74	65.541	Jaculus_jaculus
ENSEBUG00000004324	-	51	79.167	ENSKMAG00000021401	srsf3b	51	77.670	Kryptolebias_marmoratus
ENSEBUG00000004324	-	51	81.250	ENSLBEG00000013364	srsf3b	86	82.000	Labrus_bergylta
ENSEBUG00000004324	-	50	81.720	ENSLACG00000008131	SRSF3	60	81.443	Latimeria_chalumnae
ENSEBUG00000004324	-	51	82.292	ENSLAFG00000026731	-	59	82.292	Loxodonta_africana
ENSEBUG00000004324	-	50	60.000	ENSLAFG00000005666	SRSF7	56	67.742	Loxodonta_africana
ENSEBUG00000004324	-	51	81.250	ENSMAMG00000023915	srsf3b	62	80.583	Mastacembelus_armatus
ENSEBUG00000004324	-	51	80.208	ENSMZEG00005010988	srsf3b	62	79.612	Maylandia_zebra
ENSEBUG00000004324	-	54	79.208	ENSMZEG00005016010	-	65	79.208	Maylandia_zebra
ENSEBUG00000004324	-	81	59.211	ENSMAUG00000011430	-	64	67.708	Mesocricetus_auratus
ENSEBUG00000004324	-	56	75.238	ENSMICG00000004674	-	73	78.125	Microcebus_murinus
ENSEBUG00000004324	-	56	78.095	ENSMOCG00000014206	-	58	89.412	Microtus_ochrogaster
ENSEBUG00000004324	-	51	80.208	ENSMALG00000018059	srsf3b	62	79.612	Monopterus_albus
ENSEBUG00000004324	-	53	77.778	MGP_SPRETEiJ_G0020726	-	63	77.778	Mus_spretus
ENSEBUG00000004324	-	51	77.083	ENSMLUG00000030735	-	60	77.083	Myotis_lucifugus
ENSEBUG00000004324	-	51	80.208	ENSNBRG00000006749	srsf3b	65	79.612	Neolamprologus_brichardi
ENSEBUG00000004324	-	53	79.000	ENSNBRG00000016360	-	58	79.000	Neolamprologus_brichardi
ENSEBUG00000004324	-	61	51.370	ENSOPRG00000010234	SRSF7	65	52.632	Ochotona_princeps
ENSEBUG00000004324	-	51	80.208	ENSONIG00000018938	srsf3b	64	77.778	Oreochromis_niloticus
ENSEBUG00000004324	-	55	80.583	ENSORLG00015004309	srsf3b	62	80.583	Oryzias_latipes_hsok
ENSEBUG00000004324	-	55	80.583	ENSOMEG00000014893	srsf3b	68	80.583	Oryzias_melastigma
ENSEBUG00000004324	-	55	77.670	ENSPMGG00000004040	srsf3b	82	77.670	Periophthalmus_magnuspinnatus
ENSEBUG00000004324	-	63	66.102	ENSPEMG00000024099	-	57	81.928	Peromyscus_maniculatus_bairdii
ENSEBUG00000004324	-	51	81.250	ENSPFOG00000000552	srsf3b	82	79.612	Poecilia_formosa
ENSEBUG00000004324	-	51	81.250	ENSPLAG00000003715	srsf3b	82	79.612	Poecilia_latipinna
ENSEBUG00000004324	-	51	81.250	ENSPMEG00000001983	srsf3b	82	79.612	Poecilia_mexicana
ENSEBUG00000004324	-	51	81.250	ENSPREG00000004340	srsf3b	82	79.612	Poecilia_reticulata
ENSEBUG00000004324	-	54	79.208	ENSPNYG00000013747	-	65	79.208	Pundamilia_nyererei
ENSEBUG00000004324	-	53	82.000	ENSSFOG00015022844	-	61	82.000	Scleropages_formosus
ENSEBUG00000004324	-	51	81.250	ENSSDUG00000009243	srsf3b	82	80.583	Seriola_dumerili
ENSEBUG00000004324	-	51	81.250	ENSSLDG00000022631	srsf3b	82	80.583	Seriola_lalandi_dorsalis
ENSEBUG00000004324	-	51	81.250	ENSSPAG00000007497	srsf3b	62	80.583	Stegastes_partitus
ENSEBUG00000004324	-	55	77.670	ENSTRUG00000024882	srsf3b	65	77.670	Takifugu_rubripes
ENSEBUG00000004324	-	55	79.612	ENSTNIG00000014643	srsf3b	62	79.612	Tetraodon_nigroviridis
ENSEBUG00000004324	-	80	43.333	ENSUAMG00000011426	-	60	72.414	Ursus_americanus
ENSEBUG00000004324	-	55	49.153	ENSUMAG00000023107	-	60	72.414	Ursus_maritimus
ENSEBUG00000004324	-	51	81.250	ENSXMAG00000001097	srsf3b	82	79.612	Xiphophorus_maculatus