EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004354 (Gene tree)
Gene ID: -
Gene Symbol: zbtb41
Alias: si:ch1073-291l11.1|zmp:0000000646
Full Name: zinc finger and BTB domain containing 41
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 46418 bases
Position: chrFYBX02010419.1:943739-990156
Accession: ZDB-GENE-130530-649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006578	zf-C2H2	PF00096.26	6.3e-33	1	3
ENSEBUP00000006578	zf-C2H2	PF00096.26	6.3e-33	2	3
ENSEBUP00000006578	zf-C2H2	PF00096.26	6.3e-33	3	3
ENSEBUP00000006594	zf-C2H2	PF00096.26	4.1e-28	1	3
ENSEBUP00000006594	zf-C2H2	PF00096.26	4.1e-28	2	3
ENSEBUP00000006594	zf-C2H2	PF00096.26	4.1e-28	3	3
ENSEBUP00000006610	zf-C2H2	PF00096.26	1.1e-21	1	3
ENSEBUP00000006610	zf-C2H2	PF00096.26	1.1e-21	2	3
ENSEBUP00000006610	zf-C2H2	PF00096.26	1.1e-21	3	3
ENSEBUP00000006610	zf-met	PF12874.7	7.4e-06	1	1
ENSEBUP00000006578	zf-met	PF12874.7	8.9e-06	1	2
ENSEBUP00000006578	zf-met	PF12874.7	8.9e-06	2	2
ENSEBUP00000006594	zf-met	PF12874.7	0.00033	1	2
ENSEBUP00000006594	zf-met	PF12874.7	0.00033	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007052	-	2730	-	ENSEBUP00000006594	909 (aa)	-	-
ENSEBUT00000007069	-	2052	-	ENSEBUP00000006610	683 (aa)	-	-
ENSEBUT00000007036	-	2826	-	ENSEBUP00000006578	941 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004354	zbtb41	54	37.037	ENSEBUG00000014739	-	85	37.234
ENSEBUG00000004354	zbtb41	58	37.671	ENSEBUG00000015110	-	68	37.011
ENSEBUG00000004354	zbtb41	52	33.728	ENSEBUG00000001972	-	72	37.066
ENSEBUG00000004354	zbtb41	59	40.244	ENSEBUG00000005310	ZNF226	80	37.075
ENSEBUG00000004354	zbtb41	57	36.898	ENSEBUG00000010472	-	81	37.143
ENSEBUG00000004354	zbtb41	51	37.456	ENSEBUG00000004026	-	64	37.456
ENSEBUG00000004354	zbtb41	55	36.686	ENSEBUG00000009291	-	82	37.895
ENSEBUG00000004354	zbtb41	51	42.262	ENSEBUG00000012919	-	74	42.353
ENSEBUG00000004354	zbtb41	51	39.881	ENSEBUG00000017017	-	62	40.141
ENSEBUG00000004354	zbtb41	58	33.977	ENSEBUG00000013355	-	77	39.286
ENSEBUG00000004354	zbtb41	51	40.288	ENSEBUG00000001121	-	78	38.034
ENSEBUG00000004354	zbtb41	60	41.317	ENSEBUG00000015576	-	83	39.223
ENSEBUG00000004354	zbtb41	51	39.552	ENSEBUG00000009666	-	83	39.007
ENSEBUG00000004354	zbtb41	52	33.846	ENSEBUG00000006811	-	81	35.319
ENSEBUG00000004354	zbtb41	57	41.379	ENSEBUG00000011694	-	98	39.500
ENSEBUG00000004354	zbtb41	54	40.719	ENSEBUG00000003590	-	77	38.776
ENSEBUG00000004354	zbtb41	50	40.154	ENSEBUG00000004999	-	82	40.154
ENSEBUG00000004354	zbtb41	53	38.095	ENSEBUG00000006129	-	80	38.095
ENSEBUG00000004354	zbtb41	52	40.000	ENSEBUG00000011112	-	77	37.722
ENSEBUG00000004354	zbtb41	52	36.082	ENSEBUG00000006212	-	82	39.146
ENSEBUG00000004354	zbtb41	54	36.879	ENSEBUG00000012775	-	70	39.576
ENSEBUG00000004354	zbtb41	52	35.533	ENSEBUG00000011837	-	58	37.447
ENSEBUG00000004354	zbtb41	54	37.725	ENSEBUG00000008852	ZNF845	73	37.500
ENSEBUG00000004354	zbtb41	64	38.860	ENSEBUG00000015925	-	81	40.426
ENSEBUG00000004354	zbtb41	52	41.212	ENSEBUG00000000704	-	85	36.496
ENSEBUG00000004354	zbtb41	54	37.725	ENSEBUG00000008392	-	75	37.367
ENSEBUG00000004354	zbtb41	52	36.559	ENSEBUG00000005186	-	76	40.625
ENSEBUG00000004354	zbtb41	57	37.297	ENSEBUG00000009208	-	55	37.589
ENSEBUG00000004354	zbtb41	50	36.863	ENSEBUG00000010031	-	70	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004354	zbtb41	50	65.455	ENSAPLG00000007731	ZBTB41	60	65.455	Anas_platyrhynchos
ENSEBUG00000004354	zbtb41	55	64.242	ENSDARG00000054984	zbtb41	76	64.242	Danio_rerio
ENSEBUG00000004354	zbtb41	51	61.446	ENSETEG00000001738	ZBTB41	60	61.446	Echinops_telfairi
ENSEBUG00000004354	zbtb41	50	65.455	ENSGALG00000002305	ZBTB41	60	65.455	Gallus_gallus
ENSEBUG00000004354	zbtb41	51	65.455	ENSGAGG00000025218	ZBTB41	60	65.965	Gopherus_agassizii
ENSEBUG00000004354	zbtb41	53	65.455	ENSLOCG00000007514	zbtb41	63	61.635	Lepisosteus_oculatus
ENSEBUG00000004354	zbtb41	50	65.663	ENSLAFG00000012902	ZBTB41	60	66.084	Loxodonta_africana
ENSEBUG00000004354	zbtb41	53	52.727	ENSMGAG00000005700	ZBTB41	61	55.844	Meleagris_gallopavo
ENSEBUG00000004354	zbtb41	51	64.848	ENSPSIG00000012859	ZBTB41	61	64.848	Pelodiscus_sinensis
ENSEBUG00000004354	zbtb41	51	65.089	ENSSPUG00000017690	ZBTB41	60	65.972	Sphenodon_punctatus
ENSEBUG00000004354	zbtb41	61	65.455	ENSXETG00000009952	zbtb41	72	66.316	Xenopus_tropicalis