EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000004419 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 44919 bases
Position: chrFYBX02009807.1:1346413-1391331
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006694	RRM_1	PF00076.22	1.3e-54	1	4
ENSEBUP00000006694	RRM_1	PF00076.22	1.3e-54	2	4
ENSEBUP00000006694	RRM_1	PF00076.22	1.3e-54	3	4
ENSEBUP00000006694	RRM_1	PF00076.22	1.3e-54	4	4
ENSEBUP00000006719	RRM_1	PF00076.22	1.3e-54	1	4
ENSEBUP00000006719	RRM_1	PF00076.22	1.3e-54	2	4
ENSEBUP00000006719	RRM_1	PF00076.22	1.3e-54	3	4
ENSEBUP00000006719	RRM_1	PF00076.22	1.3e-54	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007155	-	6521	-	ENSEBUP00000006694	666 (aa)	-	-
ENSEBUT00000007181	-	6357	-	ENSEBUP00000006719	666 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004419	rbm28	65	42.505	ENSG00000106344	RBM28	98	39.000	Homo_sapiens
ENSEBUG00000004419	rbm28	60	43.736	ENSAPOG00000015512	rbm28	100	40.181	Acanthochromis_polyacanthus
ENSEBUG00000004419	rbm28	95	46.753	ENSAMEG00000004776	RBM28	90	46.753	Ailuropoda_melanoleuca
ENSEBUG00000004419	rbm28	58	45.545	ENSACIG00000023153	rbm28	97	43.722	Amphilophus_citrinellus
ENSEBUG00000004419	rbm28	91	43.371	ENSAOCG00000000462	rbm28	86	44.719	Amphiprion_ocellaris
ENSEBUG00000004419	rbm28	88	43.719	ENSAPEG00000012996	rbm28	83	44.843	Amphiprion_percula
ENSEBUG00000004419	rbm28	60	39.168	ENSATEG00000001672	rbm28	85	42.576	Anabas_testudineus
ENSEBUG00000004419	rbm28	98	41.502	ENSANAG00000033922	RBM28	99	40.885	Aotus_nancymaae
ENSEBUG00000004419	rbm28	99	40.026	ENSACLG00000025024	rbm28	87	45.249	Astatotilapia_calliptera
ENSEBUG00000004419	rbm28	60	43.972	ENSAMXG00000000763	rbm28	99	43.972	Astyanax_mexicanus
ENSEBUG00000004419	rbm28	60	46.420	ENSBTAG00000017001	RBM28	99	40.662	Bos_taurus
ENSEBUG00000004419	rbm28	98	41.161	ENSCJAG00000017731	RBM28	99	41.384	Callithrix_jacchus
ENSEBUG00000004419	rbm28	98	40.451	ENSCAFG00000001667	RBM28	99	39.710	Canis_familiaris
ENSEBUG00000004419	rbm28	98	40.451	ENSCAFG00020021648	RBM28	99	39.710	Canis_lupus_dingo
ENSEBUG00000004419	rbm28	92	47.120	ENSCHIG00000014146	RBM28	99	40.819	Capra_hircus
ENSEBUG00000004419	rbm28	60	45.434	ENSTSYG00000002892	RBM28	83	46.597	Carlito_syrichta
ENSEBUG00000004419	rbm28	75	34.636	ENSCAPG00000013218	RBM28	97	31.933	Cavia_aperea
ENSEBUG00000004419	rbm28	98	40.448	ENSCPOG00000006253	RBM28	99	40.420	Cavia_porcellus
ENSEBUG00000004419	rbm28	93	46.597	ENSCCAG00000035105	RBM28	82	46.597	Cebus_capucinus
ENSEBUG00000004419	rbm28	65	43.685	ENSCATG00000040497	RBM28	82	46.154	Cercocebus_atys
ENSEBUG00000004419	rbm28	98	39.067	ENSCLAG00000003707	RBM28	82	46.083	Chinchilla_lanigera
ENSEBUG00000004419	rbm28	65	42.387	ENSCSAG00000010161	RBM28	82	47.644	Chlorocebus_sabaeus
ENSEBUG00000004419	rbm28	58	41.118	ENSCHOG00000001994	-	62	40.496	Choloepus_hoffmanni
ENSEBUG00000004419	rbm28	61	38.427	ENSCING00000009238	-	74	36.422	Ciona_intestinalis
ENSEBUG00000004419	rbm28	50	48.374	ENSCANG00000038397	RBM28	93	40.832	Colobus_angolensis_palliatus
ENSEBUG00000004419	rbm28	94	47.120	ENSCGRG00001021278	Rbm28	81	45.813	Cricetulus_griseus_chok1gshd
ENSEBUG00000004419	rbm28	98	40.420	ENSCGRG00000005098	Rbm28	82	47.120	Cricetulus_griseus_crigri
ENSEBUG00000004419	rbm28	98	39.037	ENSCSEG00000004212	rbm28	99	38.360	Cynoglossus_semilaevis
ENSEBUG00000004419	rbm28	98	44.144	ENSDARG00000025332	rbm28	99	38.239	Danio_rerio
ENSEBUG00000004419	rbm28	98	40.263	ENSDNOG00000001124	RBM28	86	47.644	Dasypus_novemcinctus
ENSEBUG00000004419	rbm28	60	45.455	ENSDORG00000004184	Rbm28	89	44.298	Dipodomys_ordii
ENSEBUG00000004419	rbm28	65	37.313	FBgn0260456	CG4806	69	36.752	Drosophila_melanogaster
ENSEBUG00000004419	rbm28	58	42.067	ENSETEG00000007130	RBM28	99	39.488	Echinops_telfairi
ENSEBUG00000004419	rbm28	94	46.875	ENSEASG00005008528	RBM28	99	40.442	Equus_asinus_asinus
ENSEBUG00000004419	rbm28	94	46.875	ENSECAG00000007745	RBM28	99	40.915	Equus_caballus
ENSEBUG00000004419	rbm28	99	37.565	ENSEEUG00000002389	RBM28	100	37.013	Erinaceus_europaeus
ENSEBUG00000004419	rbm28	98	38.077	ENSELUG00000020602	rbm28	87	43.204	Esox_lucius
ENSEBUG00000004419	rbm28	98	41.223	ENSFCAG00000000946	RBM28	99	40.805	Felis_catus
ENSEBUG00000004419	rbm28	98	41.036	ENSFDAG00000010169	RBM28	99	42.133	Fukomys_damarensis
ENSEBUG00000004419	rbm28	98	39.687	ENSGMOG00000007091	rbm28	99	41.100	Gadus_morhua
ENSEBUG00000004419	rbm28	60	42.342	ENSGAFG00000004802	rbm28	96	42.568	Gambusia_affinis
ENSEBUG00000004419	rbm28	60	44.159	ENSGACG00000012612	rbm28	99	40.417	Gasterosteus_aculeatus
ENSEBUG00000004419	rbm28	98	37.803	ENSGAGG00000008873	RBM28	95	41.597	Gopherus_agassizii
ENSEBUG00000004419	rbm28	93	39.448	ENSGGOG00000004644	RBM28	59	45.089	Gorilla_gorilla
ENSEBUG00000004419	rbm28	88	40.757	ENSHBUG00000009611	rbm28	81	47.769	Haplochromis_burtoni
ENSEBUG00000004419	rbm28	98	40.751	ENSHGLG00000005409	RBM28	99	40.964	Heterocephalus_glaber_female
ENSEBUG00000004419	rbm28	98	40.751	ENSHGLG00100016458	RBM28	99	40.964	Heterocephalus_glaber_male
ENSEBUG00000004419	rbm28	85	39.674	ENSHCOG00000010597	rbm28	99	34.153	Hippocampus_comes
ENSEBUG00000004419	rbm28	58	37.374	ENSIPUG00000007103	rbm28	81	36.869	Ictalurus_punctatus
ENSEBUG00000004419	rbm28	98	39.817	ENSSTOG00000002169	RBM28	81	47.120	Ictidomys_tridecemlineatus
ENSEBUG00000004419	rbm28	98	39.178	ENSJJAG00000022400	Rbm28	99	39.945	Jaculus_jaculus
ENSEBUG00000004419	rbm28	90	43.418	ENSLBEG00000012998	rbm28	85	42.694	Labrus_bergylta
ENSEBUG00000004419	rbm28	71	40.183	ENSLACG00000010485	-	74	49.388	Latimeria_chalumnae
ENSEBUG00000004419	rbm28	99	44.845	ENSLOCG00000015541	rbm28	99	44.845	Lepisosteus_oculatus
ENSEBUG00000004419	rbm28	98	40.451	ENSLAFG00000010717	RBM28	86	47.120	Loxodonta_africana
ENSEBUG00000004419	rbm28	65	42.387	ENSMFAG00000031036	RBM28	82	46.154	Macaca_fascicularis
ENSEBUG00000004419	rbm28	93	46.154	ENSMMUG00000007250	RBM28	82	46.154	Macaca_mulatta
ENSEBUG00000004419	rbm28	99	42.387	ENSMNEG00000036970	RBM28	91	45.909	Macaca_nemestrina
ENSEBUG00000004419	rbm28	70	51.053	ENSMLEG00000037717	RBM28	72	59.574	Mandrillus_leucophaeus
ENSEBUG00000004419	rbm28	91	40.197	ENSMZEG00005019625	rbm28	100	38.082	Maylandia_zebra
ENSEBUG00000004419	rbm28	96	44.131	ENSMAUG00000002263	Rbm28	83	44.676	Mesocricetus_auratus
ENSEBUG00000004419	rbm28	91	39.011	ENSMICG00000000107	RBM28	80	45.767	Microcebus_murinus
ENSEBUG00000004419	rbm28	98	40.824	ENSMOCG00000014615	Rbm28	86	45.103	Microtus_ochrogaster
ENSEBUG00000004419	rbm28	61	44.418	ENSMMOG00000008600	rbm28	94	43.678	Mola_mola
ENSEBUG00000004419	rbm28	98	38.760	ENSMODG00000015151	RBM28	85	46.544	Monodelphis_domestica
ENSEBUG00000004419	rbm28	95	43.779	ENSMALG00000006419	rbm28	85	43.229	Monopterus_albus
ENSEBUG00000004419	rbm28	66	44.491	MGP_CAROLIEiJ_G0028162	Rbm28	99	40.000	Mus_caroli
ENSEBUG00000004419	rbm28	98	41.555	ENSMUSG00000029701	Rbm28	99	40.318	Mus_musculus
ENSEBUG00000004419	rbm28	98	40.587	MGP_PahariEiJ_G0021920	Rbm28	99	39.630	Mus_pahari
ENSEBUG00000004419	rbm28	98	41.689	MGP_SPRETEiJ_G0029162	Rbm28	99	40.186	Mus_spretus
ENSEBUG00000004419	rbm28	98	40.289	ENSMPUG00000006511	RBM28	99	39.346	Mustela_putorius_furo
ENSEBUG00000004419	rbm28	94	47.120	ENSMLUG00000002186	RBM28	84	47.120	Myotis_lucifugus
ENSEBUG00000004419	rbm28	98	40.552	ENSNGAG00000017946	-	86	45.433	Nannospalax_galili
ENSEBUG00000004419	rbm28	98	41.192	ENSNGAG00000006480	-	84	47.120	Nannospalax_galili
ENSEBUG00000004419	rbm28	98	39.687	ENSNLEG00000012307	RBM28	82	48.958	Nomascus_leucogenys
ENSEBUG00000004419	rbm28	85	44.737	ENSMEUG00000009611	RBM28	81	44.737	Notamacropus_eugenii
ENSEBUG00000004419	rbm28	74	49.378	ENSOPRG00000015140	RBM28	67	51.852	Ochotona_princeps
ENSEBUG00000004419	rbm28	88	39.753	ENSODEG00000013217	-	79	48.774	Octodon_degus
ENSEBUG00000004419	rbm28	98	39.159	ENSOANG00000000815	-	99	38.329	Ornithorhynchus_anatinus
ENSEBUG00000004419	rbm28	98	40.597	ENSOCUG00000003009	RBM28	85	45.833	Oryctolagus_cuniculus
ENSEBUG00000004419	rbm28	88	45.833	ENSORLG00000009636	rbm28	83	46.114	Oryzias_latipes
ENSEBUG00000004419	rbm28	98	41.254	ENSORLG00015015030	rbm28	99	41.379	Oryzias_latipes_hsok
ENSEBUG00000004419	rbm28	94	44.018	ENSOMEG00000007801	rbm28	100	36.974	Oryzias_melastigma
ENSEBUG00000004419	rbm28	66	43.918	ENSOGAG00000006011	RBM28	69	45.413	Otolemur_garnettii
ENSEBUG00000004419	rbm28	98	41.402	ENSOARG00000002547	RBM28	99	40.849	Ovis_aries
ENSEBUG00000004419	rbm28	93	48.691	ENSPPAG00000041730	RBM28	82	48.691	Pan_paniscus
ENSEBUG00000004419	rbm28	98	40.667	ENSPPRG00000004420	RBM28	99	40.915	Panthera_pardus
ENSEBUG00000004419	rbm28	98	40.933	ENSPTIG00000008550	RBM28	99	40.915	Panthera_tigris_altaica
ENSEBUG00000004419	rbm28	93	48.691	ENSPTRG00000019659	RBM28	82	48.691	Pan_troglodytes
ENSEBUG00000004419	rbm28	93	46.154	ENSPANG00000022295	RBM28	82	46.154	Papio_anubis
ENSEBUG00000004419	rbm28	99	38.501	ENSPKIG00000023453	rbm28	89	44.071	Paramormyrops_kingsleyae
ENSEBUG00000004419	rbm28	98	41.445	ENSPMGG00000012840	rbm28	99	41.471	Periophthalmus_magnuspinnatus
ENSEBUG00000004419	rbm28	98	40.055	ENSPEMG00000020673	Rbm28	99	40.109	Peromyscus_maniculatus_bairdii
ENSEBUG00000004419	rbm28	88	43.103	ENSPCIG00000012810	RBM28	100	40.505	Phascolarctos_cinereus
ENSEBUG00000004419	rbm28	60	42.247	ENSPFOG00000018209	rbm28	57	42.697	Poecilia_formosa
ENSEBUG00000004419	rbm28	58	42.857	ENSPLAG00000016078	rbm28	95	38.391	Poecilia_latipinna
ENSEBUG00000004419	rbm28	60	42.152	ENSPMEG00000004292	rbm28	58	42.601	Poecilia_mexicana
ENSEBUG00000004419	rbm28	58	43.560	ENSPREG00000014287	rbm28	98	38.172	Poecilia_reticulata
ENSEBUG00000004419	rbm28	65	42.505	ENSPPYG00000017975	RBM28	99	40.155	Pongo_abelii
ENSEBUG00000004419	rbm28	76	40.678	ENSPCAG00000008223	RBM28	80	39.831	Procavia_capensis
ENSEBUG00000004419	rbm28	98	40.260	ENSPCOG00000016797	RBM28	81	48.168	Propithecus_coquereli
ENSEBUG00000004419	rbm28	71	57.065	ENSPVAG00000005443	RBM28	65	57.065	Pteropus_vampyrus
ENSEBUG00000004419	rbm28	99	40.236	ENSPNYG00000014003	rbm28	100	38.320	Pundamilia_nyererei
ENSEBUG00000004419	rbm28	98	41.656	ENSRNOG00000005468	Rbm28	83	46.991	Rattus_norvegicus
ENSEBUG00000004419	rbm28	92	47.120	ENSRBIG00000033990	RBM28	82	47.120	Rhinopithecus_bieti
ENSEBUG00000004419	rbm28	92	47.120	ENSRROG00000040747	RBM28	82	47.120	Rhinopithecus_roxellana
ENSEBUG00000004419	rbm28	92	37.531	ENSSBOG00000012308	RBM28	78	52.703	Saimiri_boliviensis_boliviensis
ENSEBUG00000004419	rbm28	91	40.773	ENSSHAG00000017017	RBM28	96	40.483	Sarcophilus_harrisii
ENSEBUG00000004419	rbm28	97	42.981	ENSSFOG00015001231	rbm28	99	43.121	Scleropages_formosus
ENSEBUG00000004419	rbm28	60	41.866	ENSSMAG00000003885	rbm28	93	41.497	Scophthalmus_maximus
ENSEBUG00000004419	rbm28	59	43.084	ENSSDUG00000014270	rbm28	90	41.469	Seriola_dumerili
ENSEBUG00000004419	rbm28	94	42.404	ENSSLDG00000020099	rbm28	85	44.898	Seriola_lalandi_dorsalis
ENSEBUG00000004419	rbm28	75	47.645	ENSSARG00000008303	RBM28	77	47.043	Sorex_araneus
ENSEBUG00000004419	rbm28	69	50.820	ENSSPUG00000000838	RBM28	93	38.710	Sphenodon_punctatus
ENSEBUG00000004419	rbm28	83	42.729	ENSSPAG00000023305	rbm28	80	45.833	Stegastes_partitus
ENSEBUG00000004419	rbm28	98	41.534	ENSSSCG00000031847	RBM28	99	41.005	Sus_scrofa
ENSEBUG00000004419	rbm28	94	42.986	ENSTRUG00000013311	rbm28	81	42.986	Takifugu_rubripes
ENSEBUG00000004419	rbm28	98	39.651	ENSTNIG00000017962	rbm28	83	44.009	Tetraodon_nigroviridis
ENSEBUG00000004419	rbm28	70	44.695	ENSTBEG00000012749	RBM28	68	44.099	Tupaia_belangeri
ENSEBUG00000004419	rbm28	91	46.875	ENSTTRG00000013647	RBM28	82	46.875	Tursiops_truncatus
ENSEBUG00000004419	rbm28	98	39.418	ENSUAMG00000006949	RBM28	99	38.146	Ursus_americanus
ENSEBUG00000004419	rbm28	98	39.815	ENSUMAG00000005997	RBM28	99	39.788	Ursus_maritimus
ENSEBUG00000004419	rbm28	83	38.321	ENSVPAG00000008304	RBM28	87	38.124	Vicugna_pacos
ENSEBUG00000004419	rbm28	98	41.192	ENSVVUG00000007270	RBM28	99	40.106	Vulpes_vulpes
ENSEBUG00000004419	rbm28	98	38.768	ENSXETG00000009271	rbm28	82	43.304	Xenopus_tropicalis
ENSEBUG00000004419	rbm28	60	41.014	ENSXCOG00000020357	rbm28	94	40.618	Xiphophorus_couchianus
ENSEBUG00000004419	rbm28	58	43.499	ENSXMAG00000004415	rbm28	98	38.701	Xiphophorus_maculatus