EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004424 (Gene tree)
Gene ID: -
Gene Symbol: sf3b6
Alias: -
Full Name: splicing factor 3b%2C subunit 6
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 19427 bases
Position: chrFYBX02006215.1:704451-723877
Accession: ZDB-GENE-040625-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006711	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007173	-	384	-	ENSEBUP00000006711	127 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004424	sf3b6	63	31.325	ENSEBUG00000007683	tra2b	50	32.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004424	sf3b6	91	92.174	ENSG00000115128	SF3B6	92	92.174	Homo_sapiens
ENSEBUG00000004424	sf3b6	91	92.174	ENSAPOG00000023788	sf3b6	92	92.174	Acanthochromis_polyacanthus
ENSEBUG00000004424	sf3b6	91	92.174	ENSAMEG00000002786	SF3B6	92	92.174	Ailuropoda_melanoleuca
ENSEBUG00000004424	sf3b6	91	92.174	ENSACIG00000012608	sf3b6	92	92.174	Amphilophus_citrinellus
ENSEBUG00000004424	sf3b6	91	92.174	ENSAOCG00000013394	sf3b6	92	92.174	Amphiprion_ocellaris
ENSEBUG00000004424	sf3b6	91	92.174	ENSAPEG00000015311	sf3b6	92	92.174	Amphiprion_percula
ENSEBUG00000004424	sf3b6	91	92.174	ENSATEG00000016569	sf3b6	92	92.174	Anabas_testudineus
ENSEBUG00000004424	sf3b6	91	92.174	ENSACAG00000011677	SF3B6	92	92.174	Anolis_carolinensis
ENSEBUG00000004424	sf3b6	88	93.750	ENSANAG00000027284	SF3B6	85	93.750	Aotus_nancymaae
ENSEBUG00000004424	sf3b6	91	92.174	ENSACLG00000007793	sf3b6	92	92.174	Astatotilapia_calliptera
ENSEBUG00000004424	sf3b6	91	92.174	ENSAMXG00000034888	sf3b6	92	92.174	Astyanax_mexicanus
ENSEBUG00000004424	sf3b6	91	90.435	ENSBTAG00000049128	-	92	90.435	Bos_taurus
ENSEBUG00000004424	sf3b6	91	92.174	ENSBTAG00000003407	SF3B6	92	92.174	Bos_taurus
ENSEBUG00000004424	sf3b6	91	69.565	WBGene00016808	C50D2.5	83	69.565	Caenorhabditis_elegans
ENSEBUG00000004424	sf3b6	91	92.174	ENSCJAG00000007716	SF3B6	92	92.174	Callithrix_jacchus
ENSEBUG00000004424	sf3b6	91	92.174	ENSCAFG00000003957	SF3B6	92	92.174	Canis_familiaris
ENSEBUG00000004424	sf3b6	91	92.174	ENSCAFG00020025576	SF3B6	92	92.174	Canis_lupus_dingo
ENSEBUG00000004424	sf3b6	91	92.174	ENSCHIG00000009902	SF3B6	92	92.174	Capra_hircus
ENSEBUG00000004424	sf3b6	91	92.174	ENSTSYG00000013978	SF3B6	92	92.174	Carlito_syrichta
ENSEBUG00000004424	sf3b6	91	92.174	ENSCAPG00000016302	SF3B6	94	92.174	Cavia_aperea
ENSEBUG00000004424	sf3b6	91	92.174	ENSCPOG00000008016	SF3B6	93	92.174	Cavia_porcellus
ENSEBUG00000004424	sf3b6	91	92.174	ENSCCAG00000036653	SF3B6	92	92.174	Cebus_capucinus
ENSEBUG00000004424	sf3b6	83	90.566	ENSCCAG00000018894	-	83	90.566	Cebus_capucinus
ENSEBUG00000004424	sf3b6	91	92.174	ENSCATG00000030936	SF3B6	92	92.174	Cercocebus_atys
ENSEBUG00000004424	sf3b6	91	92.174	ENSCLAG00000014512	SF3B6	92	93.750	Chinchilla_lanigera
ENSEBUG00000004424	sf3b6	91	92.174	ENSCSAG00000008390	SF3B6	92	92.174	Chlorocebus_sabaeus
ENSEBUG00000004424	sf3b6	91	92.174	ENSCHOG00000000689	SF3B6	92	92.174	Choloepus_hoffmanni
ENSEBUG00000004424	sf3b6	91	70.435	ENSCHOG00000013886	-	92	70.435	Choloepus_hoffmanni
ENSEBUG00000004424	sf3b6	91	92.174	ENSCPBG00000020042	SF3B6	92	92.174	Chrysemys_picta_bellii
ENSEBUG00000004424	sf3b6	90	83.333	ENSCING00000012689	-	90	83.333	Ciona_intestinalis
ENSEBUG00000004424	sf3b6	91	92.174	ENSCANG00000030559	SF3B6	92	92.174	Colobus_angolensis_palliatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSCGRG00001014595	Sf3b6	97	92.174	Cricetulus_griseus_chok1gshd
ENSEBUG00000004424	sf3b6	91	92.174	ENSCGRG00000005272	Sf3b6	97	92.174	Cricetulus_griseus_crigri
ENSEBUG00000004424	sf3b6	91	91.304	ENSCSEG00000019017	sf3b6	92	91.304	Cynoglossus_semilaevis
ENSEBUG00000004424	sf3b6	91	91.304	ENSCVAG00000005055	sf3b6	92	91.304	Cyprinodon_variegatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSDARG00000009753	sf3b6	92	92.174	Danio_rerio
ENSEBUG00000004424	sf3b6	91	92.174	ENSDNOG00000007148	SF3B6	92	92.174	Dasypus_novemcinctus
ENSEBUG00000004424	sf3b6	91	92.174	ENSDORG00000009772	Sf3b6	92	92.174	Dipodomys_ordii
ENSEBUG00000004424	sf3b6	89	78.261	ENSDORG00000027390	-	89	78.261	Dipodomys_ordii
ENSEBUG00000004424	sf3b6	89	78.261	ENSDORG00000029761	-	89	78.261	Dipodomys_ordii
ENSEBUG00000004424	sf3b6	87	78.378	FBgn0035692	Sf3b6	92	78.378	Drosophila_melanogaster
ENSEBUG00000004424	sf3b6	91	92.174	ENSEASG00005009993	SF3B6	92	92.174	Equus_asinus_asinus
ENSEBUG00000004424	sf3b6	91	80.000	ENSEASG00005008061	-	90	81.250	Equus_asinus_asinus
ENSEBUG00000004424	sf3b6	68	94.186	ENSECAG00000015618	SF3B6	79	94.186	Equus_caballus
ENSEBUG00000004424	sf3b6	70	79.775	ENSECAG00000027755	-	76	79.775	Equus_caballus
ENSEBUG00000004424	sf3b6	91	90.435	ENSELUG00000010379	sf3b6	92	90.435	Esox_lucius
ENSEBUG00000004424	sf3b6	91	92.174	ENSFCAG00000031365	SF3B6	92	92.174	Felis_catus
ENSEBUG00000004424	sf3b6	91	92.174	ENSFALG00000001651	SF3B6	92	92.174	Ficedula_albicollis
ENSEBUG00000004424	sf3b6	91	92.174	ENSFDAG00000007864	SF3B6	92	92.174	Fukomys_damarensis
ENSEBUG00000004424	sf3b6	91	91.304	ENSFHEG00000000685	sf3b6	92	91.304	Fundulus_heteroclitus
ENSEBUG00000004424	sf3b6	91	89.565	ENSGMOG00000005123	sf3b6	92	89.565	Gadus_morhua
ENSEBUG00000004424	sf3b6	69	94.318	ENSGALG00000016501	SF3B6	97	94.318	Gallus_gallus
ENSEBUG00000004424	sf3b6	91	92.174	ENSGAFG00000009334	sf3b6	92	92.174	Gambusia_affinis
ENSEBUG00000004424	sf3b6	91	91.304	ENSGACG00000004803	sf3b6	92	91.304	Gasterosteus_aculeatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSGAGG00000012240	SF3B6	92	92.174	Gopherus_agassizii
ENSEBUG00000004424	sf3b6	91	92.174	ENSGGOG00000040806	SF3B6	92	92.174	Gorilla_gorilla
ENSEBUG00000004424	sf3b6	91	92.174	ENSHBUG00000012556	sf3b6	92	92.174	Haplochromis_burtoni
ENSEBUG00000004424	sf3b6	91	92.174	ENSHGLG00000014895	SF3B14	93	91.379	Heterocephalus_glaber_female
ENSEBUG00000004424	sf3b6	91	92.174	ENSHGLG00100008639	SF3B14	93	91.379	Heterocephalus_glaber_male
ENSEBUG00000004424	sf3b6	91	91.304	ENSHCOG00000019962	sf3b6	92	91.304	Hippocampus_comes
ENSEBUG00000004424	sf3b6	91	92.174	ENSIPUG00000023800	sf3b6	92	92.174	Ictalurus_punctatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSJJAG00000021819	Sf3b6	92	92.174	Jaculus_jaculus
ENSEBUG00000004424	sf3b6	91	92.174	ENSKMAG00000004000	sf3b6	92	92.174	Kryptolebias_marmoratus
ENSEBUG00000004424	sf3b6	91	90.435	ENSLBEG00000022937	sf3b6	92	90.435	Labrus_bergylta
ENSEBUG00000004424	sf3b6	91	92.174	ENSLACG00000014326	SF3B6	92	92.174	Latimeria_chalumnae
ENSEBUG00000004424	sf3b6	91	92.174	ENSLOCG00000016481	sf3b6	92	92.174	Lepisosteus_oculatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSLAFG00000029423	SF3B6	92	92.174	Loxodonta_africana
ENSEBUG00000004424	sf3b6	91	92.174	ENSMFAG00000038178	SF3B6	92	92.174	Macaca_fascicularis
ENSEBUG00000004424	sf3b6	97	86.992	ENSMMUG00000001282	SF3B6	92	92.174	Macaca_mulatta
ENSEBUG00000004424	sf3b6	91	92.174	ENSMNEG00000029050	SF3B6	92	92.174	Macaca_nemestrina
ENSEBUG00000004424	sf3b6	91	92.174	ENSMLEG00000019896	SF3B6	92	92.174	Mandrillus_leucophaeus
ENSEBUG00000004424	sf3b6	68	94.186	ENSMAMG00000007713	sf3b6	78	94.186	Mastacembelus_armatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSMZEG00005003557	sf3b6	92	92.174	Maylandia_zebra
ENSEBUG00000004424	sf3b6	91	92.174	ENSMGAG00000014057	SF3B6	92	92.174	Meleagris_gallopavo
ENSEBUG00000004424	sf3b6	91	92.174	ENSMAUG00000000586	-	92	92.174	Mesocricetus_auratus
ENSEBUG00000004424	sf3b6	91	92.174	ENSMICG00000032874	SF3B6	92	92.174	Microcebus_murinus
ENSEBUG00000004424	sf3b6	91	92.174	ENSMOCG00000014338	Sf3b6	92	92.174	Microtus_ochrogaster
ENSEBUG00000004424	sf3b6	91	91.304	ENSMMOG00000015653	sf3b6	92	91.304	Mola_mola
ENSEBUG00000004424	sf3b6	91	85.217	ENSMODG00000002144	SF3B6	92	85.217	Monodelphis_domestica
ENSEBUG00000004424	sf3b6	91	91.304	ENSMALG00000019642	sf3b6	62	91.304	Monopterus_albus
ENSEBUG00000004424	sf3b6	91	92.174	MGP_CAROLIEiJ_G0017590	Sf3b6	92	92.174	Mus_caroli
ENSEBUG00000004424	sf3b6	91	92.174	ENSMUSG00000037361	Sf3b6	98	91.071	Mus_musculus
ENSEBUG00000004424	sf3b6	91	92.174	MGP_PahariEiJ_G0029348	Sf3b6	92	92.174	Mus_pahari
ENSEBUG00000004424	sf3b6	91	92.174	MGP_SPRETEiJ_G0018434	Sf3b6	92	92.174	Mus_spretus
ENSEBUG00000004424	sf3b6	91	92.174	ENSMPUG00000013957	SF3B6	92	92.174	Mustela_putorius_furo
ENSEBUG00000004424	sf3b6	91	92.174	ENSMLUG00000002473	SF3B6	92	92.174	Myotis_lucifugus
ENSEBUG00000004424	sf3b6	91	92.174	ENSNGAG00000020256	Sf3b6	92	92.174	Nannospalax_galili
ENSEBUG00000004424	sf3b6	91	92.174	ENSNBRG00000018244	sf3b6	92	92.174	Neolamprologus_brichardi
ENSEBUG00000004424	sf3b6	91	92.174	ENSNLEG00000000815	-	92	92.174	Nomascus_leucogenys
ENSEBUG00000004424	sf3b6	83	94.340	ENSODEG00000009547	SF3B6	89	94.340	Octodon_degus
ENSEBUG00000004424	sf3b6	91	92.174	ENSONIG00000001219	sf3b6	92	92.174	Oreochromis_niloticus
ENSEBUG00000004424	sf3b6	91	92.174	ENSOANG00000007627	SF3B6	92	92.174	Ornithorhynchus_anatinus
ENSEBUG00000004424	sf3b6	91	92.174	ENSOCUG00000022008	SF3B6	92	92.174	Oryctolagus_cuniculus
ENSEBUG00000004424	sf3b6	91	90.435	ENSORLG00000015955	sf3b6	92	90.435	Oryzias_latipes
ENSEBUG00000004424	sf3b6	91	90.435	ENSORLG00020005875	sf3b6	92	90.435	Oryzias_latipes_hni
ENSEBUG00000004424	sf3b6	91	90.435	ENSORLG00015001347	sf3b6	92	90.435	Oryzias_latipes_hsok
ENSEBUG00000004424	sf3b6	91	91.304	ENSOMEG00000014506	sf3b6	92	91.304	Oryzias_melastigma
ENSEBUG00000004424	sf3b6	91	92.174	ENSOGAG00000004468	SF3B6	92	92.174	Otolemur_garnettii
ENSEBUG00000004424	sf3b6	91	92.174	ENSOARG00000017819	SF3B6	92	92.174	Ovis_aries
ENSEBUG00000004424	sf3b6	91	92.174	ENSPPAG00000027816	SF3B6	92	92.174	Pan_paniscus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPPRG00000023257	SF3B6	92	92.174	Panthera_pardus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPTIG00000013322	SF3B6	92	92.174	Panthera_tigris_altaica
ENSEBUG00000004424	sf3b6	91	92.174	ENSPTRG00000011709	SF3B6	92	92.174	Pan_troglodytes
ENSEBUG00000004424	sf3b6	91	92.174	ENSPANG00000021963	SF3B6	92	92.174	Papio_anubis
ENSEBUG00000004424	sf3b6	91	92.174	ENSPKIG00000012311	sf3b6	92	92.174	Paramormyrops_kingsleyae
ENSEBUG00000004424	sf3b6	91	92.174	ENSPSIG00000017115	SF3B6	100	92.174	Pelodiscus_sinensis
ENSEBUG00000004424	sf3b6	68	91.860	ENSPMGG00000014621	sf3b6	72	91.860	Periophthalmus_magnuspinnatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPEMG00000010308	Sf3b6	96	92.174	Peromyscus_maniculatus_bairdii
ENSEBUG00000004424	sf3b6	91	94.783	ENSPMAG00000006008	sf3b6	92	94.783	Petromyzon_marinus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPCIG00000022128	-	92	92.174	Phascolarctos_cinereus
ENSEBUG00000004424	sf3b6	89	71.681	ENSPCIG00000015858	-	90	71.681	Phascolarctos_cinereus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPFOG00000012494	sf3b6	92	92.174	Poecilia_formosa
ENSEBUG00000004424	sf3b6	91	92.174	ENSPLAG00000020460	sf3b6	92	92.174	Poecilia_latipinna
ENSEBUG00000004424	sf3b6	91	92.174	ENSPMEG00000004426	sf3b6	92	92.174	Poecilia_mexicana
ENSEBUG00000004424	sf3b6	91	92.174	ENSPPYG00000012603	SF3B6	92	92.174	Pongo_abelii
ENSEBUG00000004424	sf3b6	91	92.174	ENSPVAG00000011346	SF3B6	92	92.174	Pteropus_vampyrus
ENSEBUG00000004424	sf3b6	91	92.174	ENSPNYG00000021832	sf3b6	92	92.174	Pundamilia_nyererei
ENSEBUG00000004424	sf3b6	91	92.174	ENSPNAG00000008845	sf3b6	92	92.174	Pygocentrus_nattereri
ENSEBUG00000004424	sf3b6	91	76.522	ENSRNOG00000046172	Sf3b6	92	76.522	Rattus_norvegicus
ENSEBUG00000004424	sf3b6	94	90.000	ENSRBIG00000039598	SF3B6	100	90.000	Rhinopithecus_bieti
ENSEBUG00000004424	sf3b6	91	92.174	ENSRROG00000011368	SF3B6	92	92.174	Rhinopithecus_roxellana
ENSEBUG00000004424	sf3b6	91	92.174	ENSSBOG00000002914	SF3B6	92	92.174	Saimiri_boliviensis_boliviensis
ENSEBUG00000004424	sf3b6	91	92.174	ENSSFOG00015014370	sf3b6	92	92.174	Scleropages_formosus
ENSEBUG00000004424	sf3b6	91	90.435	ENSSMAG00000004566	sf3b6	92	90.435	Scophthalmus_maximus
ENSEBUG00000004424	sf3b6	91	92.174	ENSSDUG00000006538	sf3b6	92	92.174	Seriola_dumerili
ENSEBUG00000004424	sf3b6	91	92.174	ENSSLDG00000004494	sf3b6	92	92.174	Seriola_lalandi_dorsalis
ENSEBUG00000004424	sf3b6	91	92.174	ENSSARG00000011902	-	92	92.174	Sorex_araneus
ENSEBUG00000004424	sf3b6	91	92.174	ENSSPUG00000014919	SF3B6	92	92.174	Sphenodon_punctatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSSPAG00000013201	sf3b6	92	92.174	Stegastes_partitus
ENSEBUG00000004424	sf3b6	91	92.174	ENSSSCG00000008587	SF3B6	92	92.174	Sus_scrofa
ENSEBUG00000004424	sf3b6	91	92.174	ENSTGUG00000013191	SF3B6	92	92.174	Taeniopygia_guttata
ENSEBUG00000004424	sf3b6	91	92.174	ENSTRUG00000025286	sf3b6	92	92.174	Takifugu_rubripes
ENSEBUG00000004424	sf3b6	91	92.174	ENSTNIG00000009719	sf3b6	92	92.174	Tetraodon_nigroviridis
ENSEBUG00000004424	sf3b6	91	92.174	ENSTBEG00000012532	SF3B6	100	92.174	Tupaia_belangeri
ENSEBUG00000004424	sf3b6	91	92.174	ENSTTRG00000013430	SF3B6	100	92.174	Tursiops_truncatus
ENSEBUG00000004424	sf3b6	91	92.174	ENSUAMG00000025329	SF3B6	92	92.174	Ursus_americanus
ENSEBUG00000004424	sf3b6	91	76.724	ENSUAMG00000000978	-	92	76.724	Ursus_americanus
ENSEBUG00000004424	sf3b6	91	92.174	ENSUMAG00000022835	SF3B6	92	92.174	Ursus_maritimus
ENSEBUG00000004424	sf3b6	91	92.174	ENSVPAG00000005546	SF3B6	100	92.174	Vicugna_pacos
ENSEBUG00000004424	sf3b6	91	92.174	ENSVVUG00000010874	SF3B6	92	92.174	Vulpes_vulpes
ENSEBUG00000004424	sf3b6	91	91.304	ENSXETG00000018204	sf3b6	92	91.304	Xenopus_tropicalis
ENSEBUG00000004424	sf3b6	83	79.464	ENSXCOG00000008477	sf3b6	85	79.464	Xiphophorus_couchianus
ENSEBUG00000004424	sf3b6	91	92.174	ENSXMAG00000010747	sf3b6	92	92.174	Xiphophorus_maculatus