EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004426 (Gene tree)
Gene ID: -
Gene Symbol: LARP4 (1 of many)
Alias: PP13296
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 213801 bases
Position: chrFYBX02009533.1:604529-818329
Accession: 24320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006833	La	PF05383.17	1.8e-21	1	1
ENSEBUP00000006705	La	PF05383.17	1.9e-21	1	1
ENSEBUP00000006758	La	PF05383.17	1.9e-21	1	1
ENSEBUP00000006732	La	PF05383.17	2e-21	1	1
ENSEBUP00000006811	La	PF05383.17	2e-21	1	1
ENSEBUP00000006772	La	PF05383.17	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007167	LARP4 (1 of many)-201	5854	-	ENSEBUP00000006705	601 (aa)	-	-
ENSEBUT00000007274	LARP4 (1 of many)-205	6243	-	ENSEBUP00000006811	610 (aa)	-	-
ENSEBUT00000007235	LARP4 (1 of many)-204	3972	-	ENSEBUP00000006772	637 (aa)	-	-
ENSEBUT00000007221	LARP4 (1 of many)-203	5861	-	ENSEBUP00000006758	601 (aa)	-	-
ENSEBUT00000007296	LARP4 (1 of many)-206	5418	-	ENSEBUP00000006833	581 (aa)	-	-
ENSEBUT00000007194	LARP4 (1 of many)-202	3766	-	ENSEBUP00000006732	634 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004426	LARP4	95	40.394	ENSEBUG00000010394	LARP4	79	39.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004426	LARP4	92	41.636	ENSG00000161813	LARP4	94	59.140	Homo_sapiens
ENSEBUG00000004426	LARP4	98	39.078	ENSAPOG00000007142	larp4aa	67	40.893	Acanthochromis_polyacanthus
ENSEBUG00000004426	LARP4	74	45.000	ENSAPOG00000021331	larp4ab	55	44.622	Acanthochromis_polyacanthus
ENSEBUG00000004426	LARP4	65	49.741	ENSAMEG00000001275	LARP4	70	42.435	Ailuropoda_melanoleuca
ENSEBUG00000004426	LARP4	67	44.898	ENSACIG00000001198	larp4aa	86	62.987	Amphilophus_citrinellus
ENSEBUG00000004426	LARP4	74	45.183	ENSAOCG00000006387	larp4ab	55	44.804	Amphiprion_ocellaris
ENSEBUG00000004426	LARP4	67	45.153	ENSAOCG00000002408	larp4aa	67	40.275	Amphiprion_ocellaris
ENSEBUG00000004426	LARP4	67	45.802	ENSAPEG00000019058	larp4aa	67	40.550	Amphiprion_percula
ENSEBUG00000004426	LARP4	62	42.752	ENSAPEG00000015441	larp4ab	100	42.857	Amphiprion_percula
ENSEBUG00000004426	LARP4	91	39.455	ENSATEG00000001018	larp4ab	71	38.860	Anabas_testudineus
ENSEBUG00000004426	LARP4	95	38.899	ENSATEG00000020715	larp4aa	67	39.755	Anabas_testudineus
ENSEBUG00000004426	LARP4	93	41.860	ENSAPLG00000013661	LARP4	74	41.897	Anas_platyrhynchos
ENSEBUG00000004426	LARP4	62	51.099	ENSACAG00000017133	LARP4	74	39.966	Anolis_carolinensis
ENSEBUG00000004426	LARP4	92	40.909	ENSANAG00000029342	LARP4	70	41.455	Aotus_nancymaae
ENSEBUG00000004426	LARP4	66	45.573	ENSACLG00000002575	larp4aa	66	39.362	Astatotilapia_calliptera
ENSEBUG00000004426	LARP4	91	41.035	ENSAMXG00000036493	larp4aa	64	40.391	Astyanax_mexicanus
ENSEBUG00000004426	LARP4	73	44.368	ENSAMXG00000001515	larp4ab	65	40.614	Astyanax_mexicanus
ENSEBUG00000004426	LARP4	62	51.491	ENSBTAG00000017164	LARP4	71	40.702	Bos_taurus
ENSEBUG00000004426	LARP4	92	41.176	ENSCJAG00000021131	LARP4	70	41.728	Callithrix_jacchus
ENSEBUG00000004426	LARP4	65	49.741	ENSCAFG00000008174	LARP4	70	42.210	Canis_familiaris
ENSEBUG00000004426	LARP4	65	49.741	ENSCAFG00020014554	LARP4	70	42.210	Canis_lupus_dingo
ENSEBUG00000004426	LARP4	92	41.166	ENSCHIG00000025965	LARP4	70	41.561	Capra_hircus
ENSEBUG00000004426	LARP4	65	49.227	ENSTSYG00000004342	LARP4	69	41.516	Carlito_syrichta
ENSEBUG00000004426	LARP4	92	31.934	ENSCAPG00000012942	LARP4	69	31.387	Cavia_aperea
ENSEBUG00000004426	LARP4	85	38.026	ENSCPOG00000020519	LARP4	69	38.574	Cavia_porcellus
ENSEBUG00000004426	LARP4	92	41.682	ENSCCAG00000024439	LARP4	70	41.544	Cebus_capucinus
ENSEBUG00000004426	LARP4	92	39.194	ENSCATG00000044528	LARP4	70	39.927	Cercocebus_atys
ENSEBUG00000004426	LARP4	67	47.859	ENSCLAG00000001829	LARP4	76	39.632	Chinchilla_lanigera
ENSEBUG00000004426	LARP4	98	41.286	ENSCPBG00000019407	LARP4	67	42.088	Chrysemys_picta_bellii
ENSEBUG00000004426	LARP4	92	41.284	ENSCANG00000029159	-	70	41.865	Colobus_angolensis_palliatus
ENSEBUG00000004426	LARP4	62	45.628	ENSCANG00000033097	-	55	71.654	Colobus_angolensis_palliatus
ENSEBUG00000004426	LARP4	91	43.223	ENSCGRG00001010818	Larp4	69	42.701	Cricetulus_griseus_chok1gshd
ENSEBUG00000004426	LARP4	91	43.223	ENSCGRG00000009382	Larp4	70	42.701	Cricetulus_griseus_crigri
ENSEBUG00000004426	LARP4	81	41.684	ENSCSEG00000003240	larp4ab	61	40.994	Cynoglossus_semilaevis
ENSEBUG00000004426	LARP4	92	39.459	ENSCSEG00000001963	larp4aa	64	40.145	Cynoglossus_semilaevis
ENSEBUG00000004426	LARP4	91	39.469	ENSDARG00000074979	larp4ab	87	64.286	Danio_rerio
ENSEBUG00000004426	LARP4	89	40.179	ENSDARG00000078401	larp4aa	65	40.787	Danio_rerio
ENSEBUG00000004426	LARP4	95	41.146	ENSDNOG00000038525	LARP4	76	40.625	Dasypus_novemcinctus
ENSEBUG00000004426	LARP4	65	45.596	ENSDORG00000004013	Larp4	70	39.286	Dipodomys_ordii
ENSEBUG00000004426	LARP4	92	38.148	ENSEASG00005004356	LARP4	79	49.691	Equus_asinus_asinus
ENSEBUG00000004426	LARP4	92	41.111	ENSECAG00000012479	LARP4	70	42.077	Equus_caballus
ENSEBUG00000004426	LARP4	97	39.931	ENSELUG00000018650	larp4ab	73	39.897	Esox_lucius
ENSEBUG00000004426	LARP4	65	49.741	ENSFCAG00000031897	LARP4	69	42.029	Felis_catus
ENSEBUG00000004426	LARP4	62	51.892	ENSFALG00000002114	LARP4	77	43.036	Ficedula_albicollis
ENSEBUG00000004426	LARP4	62	49.185	ENSFDAG00000006406	-	76	40.436	Fukomys_damarensis
ENSEBUG00000004426	LARP4	76	43.202	ENSFHEG00000004338	larp4aa	54	44.685	Fundulus_heteroclitus
ENSEBUG00000004426	LARP4	75	43.936	ENSFHEG00000013854	larp4ab	56	43.478	Fundulus_heteroclitus
ENSEBUG00000004426	LARP4	67	45.685	ENSGMOG00000008246	larp4aa	68	39.085	Gadus_morhua
ENSEBUG00000004426	LARP4	76	46.220	ENSGALG00000042122	LARP4	57	47.300	Gallus_gallus
ENSEBUG00000004426	LARP4	77	44.060	ENSGAFG00000021777	larp4ab	61	43.093	Gambusia_affinis
ENSEBUG00000004426	LARP4	96	38.889	ENSGACG00000000680	larp4ab	74	38.940	Gasterosteus_aculeatus
ENSEBUG00000004426	LARP4	92	40.147	ENSGACG00000008381	larp4aa	96	46.825	Gasterosteus_aculeatus
ENSEBUG00000004426	LARP4	92	41.953	ENSGAGG00000006969	LARP4	70	42.182	Gopherus_agassizii
ENSEBUG00000004426	LARP4	92	41.712	ENSGGOG00000015230	LARP4	82	54.079	Gorilla_gorilla
ENSEBUG00000004426	LARP4	66	45.692	ENSHBUG00000023074	larp4aa	72	39.551	Haplochromis_burtoni
ENSEBUG00000004426	LARP4	79	44.915	ENSHGLG00000013875	-	75	44.124	Heterocephalus_glaber_female
ENSEBUG00000004426	LARP4	62	50.136	ENSHGLG00000005513	-	79	40.506	Heterocephalus_glaber_female
ENSEBUG00000004426	LARP4	59	46.439	ENSHGLG00100000622	-	95	46.439	Heterocephalus_glaber_male
ENSEBUG00000004426	LARP4	93	40.681	ENSHGLG00100011678	-	78	39.008	Heterocephalus_glaber_male
ENSEBUG00000004426	LARP4	62	50.136	ENSHGLG00100016984	-	71	42.463	Heterocephalus_glaber_male
ENSEBUG00000004426	LARP4	72	42.958	ENSHCOG00000020857	larp4ab	54	42.654	Hippocampus_comes
ENSEBUG00000004426	LARP4	65	45.767	ENSIPUG00000007514	larp4aa	64	38.160	Ictalurus_punctatus
ENSEBUG00000004426	LARP4	95	39.336	ENSIPUG00000021659	larp4ab	76	39.894	Ictalurus_punctatus
ENSEBUG00000004426	LARP4	62	52.033	ENSSTOG00000003553	LARP4	70	42.572	Ictidomys_tridecemlineatus
ENSEBUG00000004426	LARP4	51	55.102	ENSKMAG00000006800	larp4aa	58	43.271	Kryptolebias_marmoratus
ENSEBUG00000004426	LARP4	74	44.898	ENSKMAG00000018556	larp4ab	56	44.598	Kryptolebias_marmoratus
ENSEBUG00000004426	LARP4	66	46.234	ENSLBEG00000014537	larp4aa	61	41.058	Labrus_bergylta
ENSEBUG00000004426	LARP4	52	51.827	ENSLBEG00000019306	larp4ab	60	42.083	Labrus_bergylta
ENSEBUG00000004426	LARP4	97	38.907	ENSLACG00000019090	LARP4	75	40.488	Latimeria_chalumnae
ENSEBUG00000004426	LARP4	92	42.674	ENSLOCG00000007113	larp4ab	69	42.708	Lepisosteus_oculatus
ENSEBUG00000004426	LARP4	84	41.636	ENSLAFG00000005160	LARP4	68	48.317	Loxodonta_africana
ENSEBUG00000004426	LARP4	92	41.296	ENSMFAG00000043681	LARP4	69	44.008	Macaca_fascicularis
ENSEBUG00000004426	LARP4	92	41.296	ENSMMUG00000008172	LARP4	70	41.561	Macaca_mulatta
ENSEBUG00000004426	LARP4	90	40.987	ENSMNEG00000034602	LARP4	69	44.008	Macaca_nemestrina
ENSEBUG00000004426	LARP4	84	41.822	ENSMLEG00000039661	LARP4	70	41.924	Mandrillus_leucophaeus
ENSEBUG00000004426	LARP4	72	41.781	ENSMAMG00000002616	larp4ab	56	42.627	Mastacembelus_armatus
ENSEBUG00000004426	LARP4	67	45.802	ENSMAMG00000011206	larp4aa	67	40.210	Mastacembelus_armatus
ENSEBUG00000004426	LARP4	66	45.573	ENSMZEG00005001813	larp4aa	66	39.716	Maylandia_zebra
ENSEBUG00000004426	LARP4	62	51.075	ENSMGAG00000010598	LARP4	72	41.623	Meleagris_gallopavo
ENSEBUG00000004426	LARP4	85	40.993	ENSMICG00000030156	-	73	68.707	Microcebus_murinus
ENSEBUG00000004426	LARP4	73	47.032	ENSMICG00000012388	-	64	47.945	Microcebus_murinus
ENSEBUG00000004426	LARP4	91	42.308	ENSMOCG00000020635	Larp4	69	43.414	Microtus_ochrogaster
ENSEBUG00000004426	LARP4	85	38.207	ENSMMOG00000021861	larp4ab	99	39.801	Mola_mola
ENSEBUG00000004426	LARP4	80	39.316	ENSMMOG00000004785	larp4aa	58	40.213	Mola_mola
ENSEBUG00000004426	LARP4	58	51.176	MGP_CAROLIEiJ_G0020281	Larp4	82	51.479	Mus_caroli
ENSEBUG00000004426	LARP4	92	40.909	ENSMUSG00000023025	Larp4	90	39.868	Mus_musculus
ENSEBUG00000004426	LARP4	92	40.727	MGP_PahariEiJ_G0020284	Larp4	77	39.638	Mus_pahari
ENSEBUG00000004426	LARP4	92	41.304	ENSMPUG00000008706	LARP4	69	41.637	Mustela_putorius_furo
ENSEBUG00000004426	LARP4	65	48.705	ENSMLUG00000012513	-	69	41.486	Myotis_lucifugus
ENSEBUG00000004426	LARP4	64	49.596	ENSNGAG00000001577	-	74	40.949	Nannospalax_galili
ENSEBUG00000004426	LARP4	66	45.573	ENSNBRG00000011292	larp4aa	66	39.362	Neolamprologus_brichardi
ENSEBUG00000004426	LARP4	92	41.284	ENSNLEG00000017798	LARP4	70	41.865	Nomascus_leucogenys
ENSEBUG00000004426	LARP4	65	50.000	ENSODEG00000009770	LARP4	71	42.754	Octodon_degus
ENSEBUG00000004426	LARP4	66	45.692	ENSONIG00000011895	larp4aa	70	38.687	Oreochromis_niloticus
ENSEBUG00000004426	LARP4	73	48.630	ENSOANG00000004373	LARP4	93	44.524	Ornithorhynchus_anatinus
ENSEBUG00000004426	LARP4	91	41.209	ENSOCUG00000021417	-	69	41.712	Oryctolagus_cuniculus
ENSEBUG00000004426	LARP4	92	41.123	ENSOCUG00000026872	-	69	42.182	Oryctolagus_cuniculus
ENSEBUG00000004426	LARP4	82	42.073	ENSORLG00000006758	larp4aa	58	42.449	Oryzias_latipes
ENSEBUG00000004426	LARP4	82	42.094	ENSORLG00020010258	larp4aa	58	42.474	Oryzias_latipes_hni
ENSEBUG00000004426	LARP4	82	41.752	ENSORLG00015002292	larp4aa	58	42.245	Oryzias_latipes_hsok
ENSEBUG00000004426	LARP4	70	44.393	ENSOMEG00000019749	larp4aa	74	67.376	Oryzias_melastigma
ENSEBUG00000004426	LARP4	92	40.747	ENSOGAG00000001415	LARP4	98	41.103	Otolemur_garnettii
ENSEBUG00000004426	LARP4	92	41.166	ENSOARG00000017702	LARP4	70	41.561	Ovis_aries
ENSEBUG00000004426	LARP4	71	43.026	ENSPPAG00000039122	-	95	42.790	Pan_paniscus
ENSEBUG00000004426	LARP4	68	48.762	ENSPPAG00000035100	LARP4	59	50.396	Pan_paniscus
ENSEBUG00000004426	LARP4	84	41.111	ENSPPRG00000004522	LARP4	69	42.029	Panthera_pardus
ENSEBUG00000004426	LARP4	84	41.111	ENSPTIG00000015617	LARP4	69	42.029	Panthera_tigris_altaica
ENSEBUG00000004426	LARP4	71	42.689	ENSPTRG00000045907	-	95	42.453	Pan_troglodytes
ENSEBUG00000004426	LARP4	92	41.530	ENSPTRG00000004935	LARP4	71	41.906	Pan_troglodytes
ENSEBUG00000004426	LARP4	84	41.209	ENSPANG00000022964	LARP4	70	41.472	Papio_anubis
ENSEBUG00000004426	LARP4	98	38.731	ENSPKIG00000005950	larp4ab	71	39.094	Paramormyrops_kingsleyae
ENSEBUG00000004426	LARP4	99	40.728	ENSPSIG00000015867	LARP4	76	41.993	Pelodiscus_sinensis
ENSEBUG00000004426	LARP4	72	46.014	ENSPEMG00000018433	Larp4	62	47.500	Peromyscus_maniculatus_bairdii
ENSEBUG00000004426	LARP4	73	48.394	ENSPMAG00000002788	LARP4	78	49.773	Petromyzon_marinus
ENSEBUG00000004426	LARP4	62	50.681	ENSPCIG00000000384	LARP4	76	40.464	Phascolarctos_cinereus
ENSEBUG00000004426	LARP4	76	39.729	ENSPFOG00000013148	larp4aa	82	41.188	Poecilia_formosa
ENSEBUG00000004426	LARP4	93	39.576	ENSPFOG00000009764	larp4ab	70	39.184	Poecilia_formosa
ENSEBUG00000004426	LARP4	93	39.362	ENSPLAG00000008502	larp4ab	70	39.184	Poecilia_latipinna
ENSEBUG00000004426	LARP4	93	39.716	ENSPMEG00000002720	larp4ab	70	39.539	Poecilia_mexicana
ENSEBUG00000004426	LARP4	79	43.162	ENSPREG00000022597	larp4aa	56	44.186	Poecilia_reticulata
ENSEBUG00000004426	LARP4	93	40.747	ENSPPYG00000004512	-	99	41.636	Pongo_abelii
ENSEBUG00000004426	LARP4	62	51.475	ENSPCOG00000026291	LARP4	53	51.475	Propithecus_coquereli
ENSEBUG00000004426	LARP4	85	37.045	ENSPVAG00000016840	LARP4	64	38.105	Pteropus_vampyrus
ENSEBUG00000004426	LARP4	66	45.573	ENSPNYG00000022265	larp4aa	66	39.362	Pundamilia_nyererei
ENSEBUG00000004426	LARP4	75	45.119	ENSPNAG00000014478	larp4ab	70	41.459	Pygocentrus_nattereri
ENSEBUG00000004426	LARP4	67	46.787	ENSPNAG00000024770	larp4aa	68	39.506	Pygocentrus_nattereri
ENSEBUG00000004426	LARP4	92	41.348	ENSRBIG00000038857	-	78	50.815	Rhinopithecus_bieti
ENSEBUG00000004426	LARP4	62	50.815	ENSRROG00000042764	-	78	50.815	Rhinopithecus_roxellana
ENSEBUG00000004426	LARP4	72	43.649	ENSRROG00000025487	-	80	54.027	Rhinopithecus_roxellana
ENSEBUG00000004426	LARP4	92	40.590	ENSSBOG00000026650	LARP4	70	41.176	Saimiri_boliviensis_boliviensis
ENSEBUG00000004426	LARP4	92	39.852	ENSSFOG00015014096	larp4ab	68	40.942	Scleropages_formosus
ENSEBUG00000004426	LARP4	98	40.134	ENSSFOG00015003868	larp4aa	74	40.878	Scleropages_formosus
ENSEBUG00000004426	LARP4	74	44.420	ENSSMAG00000002838	larp4ab	55	44.495	Scophthalmus_maximus
ENSEBUG00000004426	LARP4	95	39.432	ENSSMAG00000019473	larp4aa	66	40.642	Scophthalmus_maximus
ENSEBUG00000004426	LARP4	67	45.269	ENSSDUG00000010621	larp4aa	67	40.105	Seriola_dumerili
ENSEBUG00000004426	LARP4	81	43.396	ENSSLDG00000001791	larp4ab	59	43.396	Seriola_lalandi_dorsalis
ENSEBUG00000004426	LARP4	67	45.013	ENSSLDG00000004942	larp4aa	67	39.825	Seriola_lalandi_dorsalis
ENSEBUG00000004426	LARP4	65	48.724	ENSSARG00000012469	LARP4	70	41.831	Sorex_araneus
ENSEBUG00000004426	LARP4	92	42.039	ENSSPUG00000016552	LARP4	68	42.729	Sphenodon_punctatus
ENSEBUG00000004426	LARP4	74	43.908	ENSSPAG00000002172	larp4ab	55	44.598	Stegastes_partitus
ENSEBUG00000004426	LARP4	67	46.787	ENSSPAG00000007222	larp4aa	97	46.597	Stegastes_partitus
ENSEBUG00000004426	LARP4	92	41.481	ENSSSCG00000028516	LARP4	67	45.000	Sus_scrofa
ENSEBUG00000004426	LARP4	92	42.342	ENSTGUG00000003479	LARP4	70	43.243	Taeniopygia_guttata
ENSEBUG00000004426	LARP4	72	42.597	ENSTRUG00000007206	larp4ab	55	42.141	Takifugu_rubripes
ENSEBUG00000004426	LARP4	67	43.797	ENSTNIG00000015109	larp4aa	67	39.668	Tetraodon_nigroviridis
ENSEBUG00000004426	LARP4	72	42.593	ENSTNIG00000014571	larp4ab	56	41.995	Tetraodon_nigroviridis
ENSEBUG00000004426	LARP4	92	41.091	ENSTTRG00000003764	LARP4	55	45.991	Tursiops_truncatus
ENSEBUG00000004426	LARP4	65	49.482	ENSUAMG00000013764	LARP4	96	42.173	Ursus_americanus
ENSEBUG00000004426	LARP4	65	49.482	ENSUMAG00000008473	LARP4	69	42.251	Ursus_maritimus
ENSEBUG00000004426	LARP4	92	39.383	ENSVPAG00000010136	LARP4	70	40.472	Vicugna_pacos
ENSEBUG00000004426	LARP4	65	49.482	ENSVVUG00000024717	LARP4	70	42.029	Vulpes_vulpes
ENSEBUG00000004426	LARP4	64	45.170	ENSXCOG00000019635	larp4ab	93	45.431	Xiphophorus_couchianus
ENSEBUG00000004426	LARP4	79	40.773	ENSXCOG00000006387	larp4aa	57	41.164	Xiphophorus_couchianus
ENSEBUG00000004426	LARP4	93	38.721	ENSXMAG00000002156	larp4ab	70	39.037	Xiphophorus_maculatus
ENSEBUG00000004426	LARP4	97	38.850	ENSXMAG00000010519	larp4aa	66	39.474	Xiphophorus_maculatus