EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004435 (Gene tree)
Gene ID: -
Gene Symbol: pum2 (1 of many)
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 208441 bases
Position: chrFYBX02009683.1:3079509-3287949
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	1	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	2	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	3	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	4	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	5	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	6	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	7	8
ENSEBUP00000006774	PUF	PF00806.19	1.6e-77	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007237	-	3039	-	ENSEBUP00000006774	1012 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004435	pum2	73	60.025	ENSEBUG00000014828	pum2	58	72.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004435	pum2	91	86.019	ENSG00000055917	PUM2	100	74.710	Homo_sapiens
ENSEBUG00000004435	pum2	96	83.212	ENSAPOG00000015756	pum2	95	51.754	Acanthochromis_polyacanthus
ENSEBUG00000004435	pum2	97	65.370	ENSAMEG00000002823	PUM2	96	66.051	Ailuropoda_melanoleuca
ENSEBUG00000004435	pum2	86	75.000	ENSACIG00000010646	pum2	95	75.502	Amphilophus_citrinellus
ENSEBUG00000004435	pum2	94	55.905	ENSAOCG00000016619	pum2	84	57.866	Amphiprion_ocellaris
ENSEBUG00000004435	pum2	86	83.212	ENSAPEG00000019924	pum2	95	52.191	Amphiprion_percula
ENSEBUG00000004435	pum2	96	58.715	ENSATEG00000015030	pum2	85	59.671	Anabas_testudineus
ENSEBUG00000004435	pum2	96	66.207	ENSAPLG00000010496	PUM2	86	67.061	Anas_platyrhynchos
ENSEBUG00000004435	pum2	96	65.064	ENSACAG00000010491	PUM2	95	66.143	Anolis_carolinensis
ENSEBUG00000004435	pum2	92	86.019	ENSANAG00000021807	PUM2	97	66.084	Aotus_nancymaae
ENSEBUG00000004435	pum2	96	58.778	ENSACLG00000022532	pum2	86	58.491	Astatotilapia_calliptera
ENSEBUG00000004435	pum2	92	85.071	ENSBTAG00000011155	PUM2	95	72.936	Bos_taurus
ENSEBUG00000004435	pum2	92	85.782	ENSCJAG00000007450	PUM2	97	66.245	Callithrix_jacchus
ENSEBUG00000004435	pum2	97	65.595	ENSCAFG00000003839	PUM2	96	66.277	Canis_familiaris
ENSEBUG00000004435	pum2	92	85.782	ENSCAFG00020025689	PUM2	98	66.176	Canis_lupus_dingo
ENSEBUG00000004435	pum2	92	85.071	ENSCHIG00000022180	PUM2	96	66.277	Capra_hircus
ENSEBUG00000004435	pum2	92	86.019	ENSTSYG00000014463	PUM2	96	66.244	Carlito_syrichta
ENSEBUG00000004435	pum2	89	78.558	ENSCAPG00000016888	PUM2	98	79.532	Cavia_aperea
ENSEBUG00000004435	pum2	92	85.071	ENSCPOG00000031996	PUM2	96	66.342	Cavia_porcellus
ENSEBUG00000004435	pum2	91	86.019	ENSCCAG00000037035	PUM2	96	66.310	Cebus_capucinus
ENSEBUG00000004435	pum2	91	86.019	ENSCATG00000043826	PUM2	96	66.212	Cercocebus_atys
ENSEBUG00000004435	pum2	92	85.545	ENSCLAG00000006048	PUM2	96	66.245	Chinchilla_lanigera
ENSEBUG00000004435	pum2	97	65.433	ENSCSAG00000008087	PUM2	96	66.212	Chlorocebus_sabaeus
ENSEBUG00000004435	pum2	69	68.254	ENSCHOG00000004575	PUM2	74	68.254	Choloepus_hoffmanni
ENSEBUG00000004435	pum2	86	86.375	ENSCPBG00000019966	PUM2	95	83.073	Chrysemys_picta_bellii
ENSEBUG00000004435	pum2	91	86.019	ENSCANG00000032797	PUM2	96	66.212	Colobus_angolensis_palliatus
ENSEBUG00000004435	pum2	92	86.019	ENSCGRG00001025023	Pum2	96	66.277	Cricetulus_griseus_chok1gshd
ENSEBUG00000004435	pum2	92	86.019	ENSCGRG00000001580	Pum2	96	66.277	Cricetulus_griseus_crigri
ENSEBUG00000004435	pum2	96	77.455	ENSCSEG00000020899	pum2	85	59.729	Cynoglossus_semilaevis
ENSEBUG00000004435	pum2	96	58.374	ENSCVAG00000002426	pum2	96	60.000	Cyprinodon_variegatus
ENSEBUG00000004435	pum2	97	60.330	ENSDARG00000061040	pum2	90	59.815	Danio_rerio
ENSEBUG00000004435	pum2	83	84.052	ENSDNOG00000006733	PUM2	94	78.378	Dasypus_novemcinctus
ENSEBUG00000004435	pum2	90	65.208	ENSDORG00000011453	Pum2	93	66.042	Dipodomys_ordii
ENSEBUG00000004435	pum2	83	87.589	ENSETEG00000017683	PUM2	79	87.589	Echinops_telfairi
ENSEBUG00000004435	pum2	92	86.019	ENSEASG00005009429	PUM2	96	66.277	Equus_asinus_asinus
ENSEBUG00000004435	pum2	92	86.019	ENSECAG00000021930	PUM2	95	73.089	Equus_caballus
ENSEBUG00000004435	pum2	71	58.769	ENSEEUG00000003224	-	71	58.769	Erinaceus_europaeus
ENSEBUG00000004435	pum2	97	57.390	ENSELUG00000014997	pum2	86	60.000	Esox_lucius
ENSEBUG00000004435	pum2	91	85.782	ENSFCAG00000027520	PUM2	96	66.277	Felis_catus
ENSEBUG00000004435	pum2	96	65.784	ENSFALG00000001759	PUM2	95	66.961	Ficedula_albicollis
ENSEBUG00000004435	pum2	95	80.128	ENSFDAG00000019685	PUM2	95	80.128	Fukomys_damarensis
ENSEBUG00000004435	pum2	96	83.455	ENSFHEG00000021596	pum2	80	58.388	Fundulus_heteroclitus
ENSEBUG00000004435	pum2	96	57.834	ENSGMOG00000006903	pum2	95	58.999	Gadus_morhua
ENSEBUG00000004435	pum2	86	86.861	ENSGALG00000016481	PUM2	87	80.556	Gallus_gallus
ENSEBUG00000004435	pum2	96	82.968	ENSGAFG00000013691	pum2	87	59.224	Gambusia_affinis
ENSEBUG00000004435	pum2	96	58.761	ENSGACG00000009670	pum2	95	59.693	Gasterosteus_aculeatus
ENSEBUG00000004435	pum2	96	65.588	ENSGAGG00000020698	PUM2	95	66.765	Gopherus_agassizii
ENSEBUG00000004435	pum2	91	86.019	ENSGGOG00000011374	PUM2	96	66.310	Gorilla_gorilla
ENSEBUG00000004435	pum2	96	53.659	ENSHBUG00000016453	pum2	86	55.825	Haplochromis_burtoni
ENSEBUG00000004435	pum2	91	83.649	ENSHGLG00000007892	PUM2	99	63.577	Heterocephalus_glaber_female
ENSEBUG00000004435	pum2	96	64.551	ENSHGLG00100015510	PUM2	99	63.212	Heterocephalus_glaber_male
ENSEBUG00000004435	pum2	96	58.496	ENSHCOG00000010119	pum2	85	60.078	Hippocampus_comes
ENSEBUG00000004435	pum2	92	86.019	ENSSTOG00000006262	PUM2	96	66.407	Ictidomys_tridecemlineatus
ENSEBUG00000004435	pum2	92	85.782	ENSJJAG00000020969	Pum2	96	66.311	Jaculus_jaculus
ENSEBUG00000004435	pum2	96	58.341	ENSKMAG00000017216	pum2	85	60.641	Kryptolebias_marmoratus
ENSEBUG00000004435	pum2	96	57.854	ENSLBEG00000020488	pum2	85	60.155	Labrus_bergylta
ENSEBUG00000004435	pum2	96	65.302	ENSLACG00000008723	PUM2	85	67.251	Latimeria_chalumnae
ENSEBUG00000004435	pum2	96	63.761	ENSLOCG00000017196	pum2	85	65.419	Lepisosteus_oculatus
ENSEBUG00000004435	pum2	97	65.243	ENSLAFG00000009278	PUM2	96	66.408	Loxodonta_africana
ENSEBUG00000004435	pum2	91	86.019	ENSMFAG00000000492	PUM2	96	66.115	Macaca_fascicularis
ENSEBUG00000004435	pum2	92	86.019	ENSMMUG00000023181	PUM2	96	66.115	Macaca_mulatta
ENSEBUG00000004435	pum2	92	86.019	ENSMNEG00000039659	PUM2	96	66.115	Macaca_nemestrina
ENSEBUG00000004435	pum2	91	86.019	ENSMLEG00000039243	PUM2	96	66.212	Mandrillus_leucophaeus
ENSEBUG00000004435	pum2	96	58.892	ENSMZEG00005000791	pum2	86	58.491	Maylandia_zebra
ENSEBUG00000004435	pum2	96	65.849	ENSMGAG00000014040	PUM2	95	66.732	Meleagris_gallopavo
ENSEBUG00000004435	pum2	97	65.370	ENSMAUG00000000311	Pum2	96	66.051	Mesocricetus_auratus
ENSEBUG00000004435	pum2	91	86.019	ENSMICG00000011647	PUM2	97	66.311	Microcebus_murinus
ENSEBUG00000004435	pum2	97	65.433	ENSMOCG00000013663	Pum2	96	66.115	Microtus_ochrogaster
ENSEBUG00000004435	pum2	96	58.447	ENSMMOG00000002975	pum2	95	59.673	Mola_mola
ENSEBUG00000004435	pum2	96	61.816	ENSMODG00000009811	PUM2	95	64.516	Monodelphis_domestica
ENSEBUG00000004435	pum2	92	85.545	MGP_CAROLIEiJ_G0017603	Pum2	99	71.970	Mus_caroli
ENSEBUG00000004435	pum2	92	85.782	ENSMUSG00000020594	Pum2	99	72.727	Mus_musculus
ENSEBUG00000004435	pum2	92	86.019	MGP_PahariEiJ_G0029361	Pum2	99	72.727	Mus_pahari
ENSEBUG00000004435	pum2	92	86.019	MGP_SPRETEiJ_G0018447	Pum2	99	72.727	Mus_spretus
ENSEBUG00000004435	pum2	97	65.595	ENSMPUG00000013734	PUM2	96	66.277	Mustela_putorius_furo
ENSEBUG00000004435	pum2	97	65.467	ENSMLUG00000007362	PUM2	96	66.148	Myotis_lucifugus
ENSEBUG00000004435	pum2	96	45.337	ENSNGAG00000016239	-	93	48.800	Nannospalax_galili
ENSEBUG00000004435	pum2	97	64.981	ENSNGAG00000016665	-	96	65.856	Nannospalax_galili
ENSEBUG00000004435	pum2	96	61.071	ENSNBRG00000020737	pum2	94	58.797	Neolamprologus_brichardi
ENSEBUG00000004435	pum2	91	86.019	ENSNLEG00000002509	PUM2	96	67.428	Nomascus_leucogenys
ENSEBUG00000004435	pum2	89	63.863	ENSMEUG00000016567	PUM2	89	64.899	Notamacropus_eugenii
ENSEBUG00000004435	pum2	65	90.476	ENSOPRG00000001963	PUM2	86	53.591	Ochotona_princeps
ENSEBUG00000004435	pum2	94	81.292	ENSODEG00000007823	PUM2	96	65.856	Octodon_degus
ENSEBUG00000004435	pum2	96	58.989	ENSONIG00000006119	pum2	85	60.058	Oreochromis_niloticus
ENSEBUG00000004435	pum2	97	65.272	ENSOCUG00000017908	PUM2	96	66.148	Oryctolagus_cuniculus
ENSEBUG00000004435	pum2	86	83.171	ENSORLG00000012611	pum2	95	53.778	Oryzias_latipes
ENSEBUG00000004435	pum2	86	83.171	ENSORLG00020014452	pum2	95	53.498	Oryzias_latipes_hni
ENSEBUG00000004435	pum2	96	58.366	ENSORLG00015009427	pum2	86	59.342	Oryzias_latipes_hsok
ENSEBUG00000004435	pum2	96	53.143	ENSOMEG00000005889	pum2	100	53.438	Oryzias_melastigma
ENSEBUG00000004435	pum2	91	86.280	ENSOGAG00000002187	PUM2	95	51.111	Otolemur_garnettii
ENSEBUG00000004435	pum2	97	65.272	ENSOARG00000017236	PUM2	96	66.245	Ovis_aries
ENSEBUG00000004435	pum2	91	86.019	ENSPPAG00000023095	PUM2	96	67.527	Pan_paniscus
ENSEBUG00000004435	pum2	91	85.782	ENSPPRG00000021443	PUM2	100	66.634	Panthera_pardus
ENSEBUG00000004435	pum2	91	85.782	ENSPTIG00000018982	PUM2	96	66.277	Panthera_tigris_altaica
ENSEBUG00000004435	pum2	91	86.019	ENSPTRG00000011692	PUM2	96	67.527	Pan_troglodytes
ENSEBUG00000004435	pum2	91	65.257	ENSPANG00000009393	PUM2	100	86.111	Papio_anubis
ENSEBUG00000004435	pum2	96	53.307	ENSPKIG00000023195	pum2	95	53.603	Paramormyrops_kingsleyae
ENSEBUG00000004435	pum2	96	65.490	ENSPSIG00000011626	PUM2	84	66.667	Pelodiscus_sinensis
ENSEBUG00000004435	pum2	96	82.725	ENSPMGG00000016123	pum2	95	52.208	Periophthalmus_magnuspinnatus
ENSEBUG00000004435	pum2	97	65.272	ENSPEMG00000008357	Pum2	96	66.245	Peromyscus_maniculatus_bairdii
ENSEBUG00000004435	pum2	96	72.012	ENSPMAG00000007038	pum2	95	72.692	Petromyzon_marinus
ENSEBUG00000004435	pum2	83	82.742	ENSPCIG00000022139	PUM2	95	80.624	Phascolarctos_cinereus
ENSEBUG00000004435	pum2	96	57.319	ENSPFOG00000019208	pum2	86	58.757	Poecilia_formosa
ENSEBUG00000004435	pum2	96	82.968	ENSPLAG00000001826	pum2	86	60.116	Poecilia_latipinna
ENSEBUG00000004435	pum2	96	58.755	ENSPMEG00000015766	pum2	87	60.124	Poecilia_mexicana
ENSEBUG00000004435	pum2	87	82.968	ENSPREG00000006905	pum2	95	52.390	Poecilia_reticulata
ENSEBUG00000004435	pum2	97	65.823	ENSPPYG00000012617	PUM2	96	66.407	Pongo_abelii
ENSEBUG00000004435	pum2	66	91.304	ENSPCAG00000008001	PUM2	66	91.304	Procavia_capensis
ENSEBUG00000004435	pum2	92	86.019	ENSPCOG00000019636	PUM2	97	66.278	Propithecus_coquereli
ENSEBUG00000004435	pum2	96	60.665	ENSPVAG00000002920	PUM2	97	61.089	Pteropus_vampyrus
ENSEBUG00000004435	pum2	96	58.778	ENSPNYG00000022901	pum2	86	58.491	Pundamilia_nyererei
ENSEBUG00000004435	pum2	82	80.244	ENSPNAG00000008025	pum2	98	53.899	Pygocentrus_nattereri
ENSEBUG00000004435	pum2	92	86.256	ENSRNOG00000006180	Pum2	96	66.569	Rattus_norvegicus
ENSEBUG00000004435	pum2	92	86.019	ENSRBIG00000044880	PUM2	100	66.568	Rhinopithecus_bieti
ENSEBUG00000004435	pum2	91	86.019	ENSSBOG00000022007	PUM2	97	66.278	Saimiri_boliviensis_boliviensis
ENSEBUG00000004435	pum2	96	62.379	ENSSHAG00000002778	PUM2	95	63.698	Sarcophilus_harrisii
ENSEBUG00000004435	pum2	89	63.636	ENSSFOG00015003476	pum2	86	64.301	Scleropages_formosus
ENSEBUG00000004435	pum2	96	58.738	ENSSMAG00000018236	pum2	95	51.591	Scophthalmus_maximus
ENSEBUG00000004435	pum2	90	57.851	ENSSDUG00000001800	pum2	87	59.548	Seriola_dumerili
ENSEBUG00000004435	pum2	96	58.293	ENSSLDG00000000981	pum2	85	60.193	Seriola_lalandi_dorsalis
ENSEBUG00000004435	pum2	93	56.837	ENSSARG00000010992	PUM2	81	57.551	Sorex_araneus
ENSEBUG00000004435	pum2	96	64.966	ENSSPUG00000017012	PUM2	96	66.045	Sphenodon_punctatus
ENSEBUG00000004435	pum2	86	83.212	ENSSPAG00000022948	pum2	95	51.946	Stegastes_partitus
ENSEBUG00000004435	pum2	92	86.019	ENSSSCG00000008600	PUM2	95	72.630	Sus_scrofa
ENSEBUG00000004435	pum2	96	65.882	ENSTGUG00000013149	PUM2	95	66.765	Taeniopygia_guttata
ENSEBUG00000004435	pum2	96	59.763	ENSTRUG00000018167	pum2	86	59.941	Takifugu_rubripes
ENSEBUG00000004435	pum2	96	57.808	ENSTNIG00000003116	pum2	85	59.324	Tetraodon_nigroviridis
ENSEBUG00000004435	pum2	76	81.687	ENSTBEG00000008729	PUM2	76	81.174	Tupaia_belangeri
ENSEBUG00000004435	pum2	97	64.591	ENSTTRG00000004887	PUM2	96	65.564	Tursiops_truncatus
ENSEBUG00000004435	pum2	69	85.782	ENSUAMG00000008120	PUM2	98	73.548	Ursus_americanus
ENSEBUG00000004435	pum2	92	86.019	ENSUMAG00000023198	PUM2	96	66.277	Ursus_maritimus
ENSEBUG00000004435	pum2	97	65.467	ENSVPAG00000005056	PUM2	96	66.148	Vicugna_pacos
ENSEBUG00000004435	pum2	92	86.019	ENSVVUG00000014829	PUM2	97	66.277	Vulpes_vulpes
ENSEBUG00000004435	pum2	96	62.086	ENSXETG00000008903	pum2	86	63.209	Xenopus_tropicalis
ENSEBUG00000004435	pum2	90	58.299	ENSXCOG00000002556	pum2	87	60.124	Xiphophorus_couchianus
ENSEBUG00000004435	pum2	96	82.968	ENSXMAG00000017682	pum2	86	60.308	Xiphophorus_maculatus