EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000004464 (Gene tree)
Gene ID: -
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 65323 bases
Position: chrFYBX02010627.1:3371859-3437181
Accession: ZDB-GENE-030131-3112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006836	NOB1_Zn_bind	PF08772.11	1.2e-26	1	1
ENSEBUP00000006793	NOB1_Zn_bind	PF08772.11	1.4e-26	1	1
ENSEBUP00000006779	NOB1_Zn_bind	PF08772.11	1.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007243	-	4883	-	ENSEBUP00000006779	450 (aa)	-	-
ENSEBUT00000007299	-	1119	-	ENSEBUP00000006836	372 (aa)	-	-
ENSEBUT00000007256	-	4895	-	ENSEBUP00000006793	411 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004464	nob1	99	45.393	ENSG00000141101	NOB1	99	46.585	Homo_sapiens
ENSEBUG00000004464	nob1	94	43.264	ENSAPOG00000008241	nob1	94	46.647	Acanthochromis_polyacanthus
ENSEBUG00000004464	nob1	99	44.866	ENSAMEG00000006706	NOB1	98	44.196	Ailuropoda_melanoleuca
ENSEBUG00000004464	nob1	97	47.607	ENSACIG00000001503	nob1	98	46.231	Amphilophus_citrinellus
ENSEBUG00000004464	nob1	99	46.565	ENSAOCG00000006533	nob1	100	47.692	Amphiprion_ocellaris
ENSEBUG00000004464	nob1	99	46.096	ENSAPEG00000000029	nob1	100	47.208	Amphiprion_percula
ENSEBUG00000004464	nob1	99	46.096	ENSAPEG00000000032	-	100	47.208	Amphiprion_percula
ENSEBUG00000004464	nob1	99	46.923	ENSATEG00000014585	nob1	100	48.579	Anabas_testudineus
ENSEBUG00000004464	nob1	97	47.191	ENSACAG00000003697	NOB1	85	46.966	Anolis_carolinensis
ENSEBUG00000004464	nob1	99	44.667	ENSANAG00000036611	NOB1	99	45.610	Aotus_nancymaae
ENSEBUG00000004464	nob1	99	45.354	ENSACLG00000024897	nob1	99	44.592	Astatotilapia_calliptera
ENSEBUG00000004464	nob1	94	42.130	ENSAMXG00000003642	nob1	99	42.593	Astyanax_mexicanus
ENSEBUG00000004464	nob1	99	45.190	ENSBTAG00000020633	NOB1	99	45.414	Bos_taurus
ENSEBUG00000004464	nob1	99	36.461	WBGene00021843	Y54E10BR.4	98	35.405	Caenorhabditis_elegans
ENSEBUG00000004464	nob1	99	44.766	ENSCJAG00000015230	NOB1	99	45.434	Callithrix_jacchus
ENSEBUG00000004464	nob1	98	47.330	ENSCAFG00000020251	NOB1	99	47.087	Canis_familiaris
ENSEBUG00000004464	nob1	98	47.330	ENSCAFG00020020297	NOB1	99	47.087	Canis_lupus_dingo
ENSEBUG00000004464	nob1	98	47.970	ENSCHIG00000027022	NOB1	99	47.716	Capra_hircus
ENSEBUG00000004464	nob1	99	44.766	ENSTSYG00000003084	NOB1	99	45.212	Carlito_syrichta
ENSEBUG00000004464	nob1	93	46.475	ENSCAPG00000015542	NOB1	100	48.837	Cavia_aperea
ENSEBUG00000004464	nob1	99	46.413	ENSCPOG00000022538	NOB1	99	48.403	Cavia_porcellus
ENSEBUG00000004464	nob1	99	45.964	ENSCCAG00000023773	NOB1	99	46.247	Cebus_capucinus
ENSEBUG00000004464	nob1	99	44.270	ENSCATG00000039487	NOB1	99	44.719	Cercocebus_atys
ENSEBUG00000004464	nob1	77	52.683	ENSCLAG00000005926	NOB1	100	47.041	Chinchilla_lanigera
ENSEBUG00000004464	nob1	99	45.880	ENSCSAG00000004158	NOB1	99	45.434	Chlorocebus_sabaeus
ENSEBUG00000004464	nob1	98	43.137	ENSCHOG00000011047	NOB1	99	43.137	Choloepus_hoffmanni
ENSEBUG00000004464	nob1	98	47.118	ENSCPBG00000027035	NOB1	92	45.233	Chrysemys_picta_bellii
ENSEBUG00000004464	nob1	98	44.975	ENSCING00000023441	-	99	45.729	Ciona_intestinalis
ENSEBUG00000004464	nob1	99	41.020	ENSCSAVG00000009081	-	99	41.611	Ciona_savignyi
ENSEBUG00000004464	nob1	98	47.000	ENSCGRG00001009255	Nob1	94	47.000	Cricetulus_griseus_chok1gshd
ENSEBUG00000004464	nob1	98	47.000	ENSCGRG00000010869	Nob1	99	47.000	Cricetulus_griseus_crigri
ENSEBUG00000004464	nob1	87	46.056	ENSCSEG00000019657	nob1	91	44.192	Cynoglossus_semilaevis
ENSEBUG00000004464	nob1	98	44.595	ENSDARG00000016080	nob1	98	43.274	Danio_rerio
ENSEBUG00000004464	nob1	99	45.067	ENSDNOG00000041643	NOB1	99	46.455	Dasypus_novemcinctus
ENSEBUG00000004464	nob1	98	46.305	ENSDORG00000000483	Nob1	99	46.059	Dipodomys_ordii
ENSEBUG00000004464	nob1	83	43.810	FBgn0030177	CG2972	98	34.698	Drosophila_melanogaster
ENSEBUG00000004464	nob1	68	38.214	ENSETEG00000000011	-	58	42.616	Echinops_telfairi
ENSEBUG00000004464	nob1	98	44.928	ENSEASG00005021356	NOB1	83	45.516	Equus_asinus_asinus
ENSEBUG00000004464	nob1	98	45.411	ENSECAG00000023748	NOB1	80	45.740	Equus_caballus
ENSEBUG00000004464	nob1	73	36.275	ENSEEUG00000014384	NOB1	71	33.721	Erinaceus_europaeus
ENSEBUG00000004464	nob1	98	45.022	ENSELUG00000016199	nob1	98	42.451	Esox_lucius
ENSEBUG00000004464	nob1	98	46.715	ENSFCAG00000002958	NOB1	99	46.715	Felis_catus
ENSEBUG00000004464	nob1	55	49.770	ENSFALG00000002747	NOB1	86	50.000	Ficedula_albicollis
ENSEBUG00000004464	nob1	99	45.516	ENSFDAG00000009239	NOB1	99	46.059	Fukomys_damarensis
ENSEBUG00000004464	nob1	55	50.971	ENSFHEG00000007657	nob1	53	50.971	Fundulus_heteroclitus
ENSEBUG00000004464	nob1	97	46.736	ENSGMOG00000010638	nob1	98	48.042	Gadus_morhua
ENSEBUG00000004464	nob1	99	42.129	ENSGALG00000000693	NOB1	99	41.463	Gallus_gallus
ENSEBUG00000004464	nob1	91	52.593	ENSGAFG00000006104	nob1	100	43.777	Gambusia_affinis
ENSEBUG00000004464	nob1	98	43.736	ENSGACG00000017552	nob1	98	45.844	Gasterosteus_aculeatus
ENSEBUG00000004464	nob1	98	47.000	ENSGAGG00000003902	NOB1	99	46.750	Gopherus_agassizii
ENSEBUG00000004464	nob1	99	45.393	ENSGGOG00000025456	NOB1	99	46.585	Gorilla_gorilla
ENSEBUG00000004464	nob1	99	44.144	ENSHBUG00000002580	nob1	99	45.297	Haplochromis_burtoni
ENSEBUG00000004464	nob1	99	46.980	ENSHGLG00000014260	NOB1	99	46.413	Heterocephalus_glaber_female
ENSEBUG00000004464	nob1	99	46.980	ENSHGLG00100013978	NOB1	99	46.683	Heterocephalus_glaber_male
ENSEBUG00000004464	nob1	99	45.354	ENSHCOG00000006699	nob1	99	45.133	Hippocampus_comes
ENSEBUG00000004464	nob1	99	42.857	ENSIPUG00000007579	nob1	99	42.647	Ictalurus_punctatus
ENSEBUG00000004464	nob1	98	46.650	ENSSTOG00000001204	NOB1	99	46.650	Ictidomys_tridecemlineatus
ENSEBUG00000004464	nob1	99	46.078	ENSJJAG00000015543	Nob1	99	45.343	Jaculus_jaculus
ENSEBUG00000004464	nob1	90	53.488	ENSKMAG00000018220	nob1	99	45.255	Kryptolebias_marmoratus
ENSEBUG00000004464	nob1	99	46.535	ENSLBEG00000026375	nob1	100	46.154	Labrus_bergylta
ENSEBUG00000004464	nob1	98	44.760	ENSLACG00000006973	NOB1	98	44.639	Latimeria_chalumnae
ENSEBUG00000004464	nob1	91	52.195	ENSLOCG00000001411	nob1	99	43.791	Lepisosteus_oculatus
ENSEBUG00000004464	nob1	98	43.826	ENSLAFG00000008978	NOB1	99	44.660	Loxodonta_africana
ENSEBUG00000004464	nob1	99	44.866	ENSMFAG00000030131	NOB1	99	44.944	Macaca_fascicularis
ENSEBUG00000004464	nob1	99	44.270	ENSMMUG00000006506	NOB1	99	44.944	Macaca_mulatta
ENSEBUG00000004464	nob1	99	44.270	ENSMNEG00000028829	NOB1	99	41.348	Macaca_nemestrina
ENSEBUG00000004464	nob1	99	44.494	ENSMLEG00000032913	NOB1	99	44.944	Mandrillus_leucophaeus
ENSEBUG00000004464	nob1	98	47.074	ENSMZEG00005028346	nob1	99	46.565	Maylandia_zebra
ENSEBUG00000004464	nob1	72	44.444	ENSMZEG00005003827	-	84	43.000	Maylandia_zebra
ENSEBUG00000004464	nob1	55	51.691	ENSMGAG00000008675	NOB1	98	42.905	Meleagris_gallopavo
ENSEBUG00000004464	nob1	98	46.020	ENSMAUG00000013554	Nob1	99	46.020	Mesocricetus_auratus
ENSEBUG00000004464	nob1	99	44.989	ENSMICG00000012123	NOB1	99	45.985	Microcebus_murinus
ENSEBUG00000004464	nob1	98	47.030	ENSMOCG00000010370	Nob1	99	47.030	Microtus_ochrogaster
ENSEBUG00000004464	nob1	99	46.637	ENSMMOG00000002120	nob1	99	46.569	Mola_mola
ENSEBUG00000004464	nob1	99	45.033	ENSMODG00000002677	NOB1	99	45.695	Monodelphis_domestica
ENSEBUG00000004464	nob1	99	45.524	ENSMALG00000014580	nob1	100	46.803	Monopterus_albus
ENSEBUG00000004464	nob1	98	47.277	MGP_CAROLIEiJ_G0031536	Nob1	97	47.277	Mus_caroli
ENSEBUG00000004464	nob1	98	47.264	ENSMUSG00000003848	Nob1	99	47.512	Mus_musculus
ENSEBUG00000004464	nob1	99	45.880	MGP_PahariEiJ_G0023136	Nob1	99	46.305	Mus_pahari
ENSEBUG00000004464	nob1	99	46.667	MGP_SPRETEiJ_G0032654	Nob1	97	47.174	Mus_spretus
ENSEBUG00000004464	nob1	98	46.117	ENSMPUG00000007483	NOB1	90	45.190	Mustela_putorius_furo
ENSEBUG00000004464	nob1	98	47.188	ENSMLUG00000006667	NOB1	99	46.455	Myotis_lucifugus
ENSEBUG00000004464	nob1	98	45.387	ENSNGAG00000008627	Nob1	99	46.384	Nannospalax_galili
ENSEBUG00000004464	nob1	99	45.434	ENSNLEG00000005572	NOB1	99	46.098	Nomascus_leucogenys
ENSEBUG00000004464	nob1	79	44.972	ENSOPRG00000006721	NOB1	99	44.753	Ochotona_princeps
ENSEBUG00000004464	nob1	99	45.885	ENSODEG00000014376	NOB1	99	46.135	Octodon_degus
ENSEBUG00000004464	nob1	98	45.089	ENSONIG00000003319	nob1	99	45.089	Oreochromis_niloticus
ENSEBUG00000004464	nob1	93	45.974	ENSOCUG00000004400	NOB1	100	45.833	Oryctolagus_cuniculus
ENSEBUG00000004464	nob1	99	46.040	ENSORLG00000018862	nob1	100	46.059	Oryzias_latipes
ENSEBUG00000004464	nob1	99	47.395	ENSORLG00020014687	nob1	100	46.402	Oryzias_latipes_hni
ENSEBUG00000004464	nob1	99	46.366	ENSORLG00015012156	nob1	100	46.115	Oryzias_latipes_hsok
ENSEBUG00000004464	nob1	91	51.456	ENSOMEG00000022722	nob1	100	43.683	Oryzias_melastigma
ENSEBUG00000004464	nob1	98	42.439	ENSOGAG00000004590	NOB1	99	43.415	Otolemur_garnettii
ENSEBUG00000004464	nob1	99	45.843	ENSOARG00000003606	NOB1	99	46.455	Ovis_aries
ENSEBUG00000004464	nob1	97	43.379	ENSPPAG00000003317	-	99	43.590	Pan_paniscus
ENSEBUG00000004464	nob1	99	45.169	ENSPPAG00000040257	NOB1	99	46.341	Pan_paniscus
ENSEBUG00000004464	nob1	98	46.117	ENSPPRG00000016949	NOB1	99	45.146	Panthera_pardus
ENSEBUG00000004464	nob1	98	46.117	ENSPTIG00000011234	NOB1	99	45.146	Panthera_tigris_altaica
ENSEBUG00000004464	nob1	99	45.393	ENSPTRG00000008285	NOB1	99	46.585	Pan_troglodytes
ENSEBUG00000004464	nob1	98	45.854	ENSPANG00000015858	NOB1	99	44.944	Papio_anubis
ENSEBUG00000004464	nob1	99	44.471	ENSPKIG00000020293	nob1	99	44.952	Paramormyrops_kingsleyae
ENSEBUG00000004464	nob1	98	44.766	ENSPSIG00000012477	NOB1	99	44.810	Pelodiscus_sinensis
ENSEBUG00000004464	nob1	99	46.597	ENSPMGG00000023476	nob1	99	45.802	Periophthalmus_magnuspinnatus
ENSEBUG00000004464	nob1	99	46.552	ENSPEMG00000010995	Nob1	99	46.552	Peromyscus_maniculatus_bairdii
ENSEBUG00000004464	nob1	55	52.451	ENSPCIG00000007274	-	94	47.692	Phascolarctos_cinereus
ENSEBUG00000004464	nob1	93	42.462	ENSPFOG00000000027	nob1	99	42.065	Poecilia_formosa
ENSEBUG00000004464	nob1	54	52.475	ENSPLAG00000011546	nob1	97	40.385	Poecilia_latipinna
ENSEBUG00000004464	nob1	99	45.050	ENSPMEG00000023435	nob1	100	44.691	Poecilia_mexicana
ENSEBUG00000004464	nob1	99	43.534	ENSPREG00000007675	nob1	99	43.966	Poecilia_reticulata
ENSEBUG00000004464	nob1	99	44.866	ENSPPYG00000007509	NOB1	99	45.588	Pongo_abelii
ENSEBUG00000004464	nob1	99	44.743	ENSPCAG00000001527	NOB1	99	45.060	Procavia_capensis
ENSEBUG00000004464	nob1	99	45.964	ENSPCOG00000025515	NOB1	99	46.192	Propithecus_coquereli
ENSEBUG00000004464	nob1	79	30.000	ENSPVAG00000013330	NOB1	50	30.612	Pteropus_vampyrus
ENSEBUG00000004464	nob1	98	47.493	ENSPNYG00000018449	nob1	99	46.719	Pundamilia_nyererei
ENSEBUG00000004464	nob1	99	51.244	ENSPNAG00000004244	nob1	99	44.743	Pygocentrus_nattereri
ENSEBUG00000004464	nob1	98	45.588	ENSRNOG00000021890	Nob1	99	46.078	Rattus_norvegicus
ENSEBUG00000004464	nob1	99	44.944	ENSRBIG00000019599	NOB1	99	45.169	Rhinopithecus_bieti
ENSEBUG00000004464	nob1	99	44.944	ENSRROG00000033419	NOB1	99	45.169	Rhinopithecus_roxellana
ENSEBUG00000004464	nob1	75	39.362	YOR056C	NOB1	70	39.362	Saccharomyces_cerevisiae
ENSEBUG00000004464	nob1	94	44.359	ENSSBOG00000029042	NOB1	90	44.186	Saimiri_boliviensis_boliviensis
ENSEBUG00000004464	nob1	99	46.429	ENSSHAG00000015387	NOB1	99	45.433	Sarcophilus_harrisii
ENSEBUG00000004464	nob1	99	51.707	ENSSFOG00015008503	nob1	100	45.133	Scleropages_formosus
ENSEBUG00000004464	nob1	96	52.593	ENSSMAG00000003064	nob1	100	45.763	Scophthalmus_maximus
ENSEBUG00000004464	nob1	99	43.237	ENSSDUG00000007307	nob1	100	43.478	Seriola_dumerili
ENSEBUG00000004464	nob1	93	41.261	ENSSLDG00000011459	-	95	50.000	Seriola_lalandi_dorsalis
ENSEBUG00000004464	nob1	93	43.188	ENSSPUG00000005621	NOB1	99	45.115	Sphenodon_punctatus
ENSEBUG00000004464	nob1	99	46.020	ENSSPAG00000022362	nob1	99	47.264	Stegastes_partitus
ENSEBUG00000004464	nob1	98	45.985	ENSSSCG00000002753	NOB1	99	45.122	Sus_scrofa
ENSEBUG00000004464	nob1	54	50.235	ENSTGUG00000008124	NOB1	92	50.235	Taeniopygia_guttata
ENSEBUG00000004464	nob1	92	51.244	ENSTRUG00000004780	nob1	99	43.125	Takifugu_rubripes
ENSEBUG00000004464	nob1	92	51.244	ENSTRUG00000023145	nob1	99	43.125	Takifugu_rubripes
ENSEBUG00000004464	nob1	99	43.099	ENSTNIG00000002552	nob1	99	43.750	Tetraodon_nigroviridis
ENSEBUG00000004464	nob1	70	37.736	ENSTBEG00000000690	NOB1	59	37.421	Tupaia_belangeri
ENSEBUG00000004464	nob1	55	52.195	ENSUAMG00000028135	NOB1	80	52.427	Ursus_americanus
ENSEBUG00000004464	nob1	99	44.395	ENSUMAG00000018658	NOB1	94	44.660	Ursus_maritimus
ENSEBUG00000004464	nob1	98	46.602	ENSVVUG00000017271	NOB1	99	46.845	Vulpes_vulpes
ENSEBUG00000004464	nob1	100	44.589	ENSXETG00000017874	nob1	99	45.022	Xenopus_tropicalis
ENSEBUG00000004464	nob1	93	42.559	ENSXCOG00000009734	nob1	100	48.607	Xiphophorus_couchianus
ENSEBUG00000004464	nob1	99	44.096	ENSXMAG00000017371	nob1	100	44.337	Xiphophorus_maculatus