EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004479 (Gene tree)
Gene ID: -
Gene Symbol: ddx20
Alias: fb59a11|si:dkey-193l3.3|si:dkey-193l3.4|wu:fb16g08|wu:fb59a11
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 214611 bases
Position: chrFYBX02010423.1:443419-658029
Accession: ZDB-GENE-030131-202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006812	DEAD	PF00270.29	4.1e-34	1	1
ENSEBUP00000006844	DEAD	PF00270.29	7.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007307	-	1170	-	ENSEBUP00000006844	389 (aa)	-	-
ENSEBUT00000007275	-	1274	-	ENSEBUP00000006812	314 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004479	ddx20	90	35.439	ENSEBUG00000003713	eif4a3	64	35.439
ENSEBUG00000004479	ddx20	71	30.389	ENSEBUG00000001119	zgc:193690	52	30.389
ENSEBUG00000004479	ddx20	63	33.333	ENSEBUG00000003908	-	69	33.000
ENSEBUG00000004479	ddx20	89	33.688	ENSEBUG00000010042	ddx39aa	75	33.688
ENSEBUG00000004479	ddx20	90	33.216	ENSEBUG00000009705	eif4a1b	61	33.099
ENSEBUG00000004479	ddx20	96	30.476	ENSEBUG00000004340	ddx5	54	30.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004479	ddx20	95	67.677	ENSG00000064703	DDX20	60	72.289	Homo_sapiens
ENSEBUG00000004479	ddx20	96	67.434	ENSCAFG00020008055	DDX20	90	68.227	Canis_lupus_dingo
ENSEBUG00000004479	ddx20	96	58.940	ENSCSAVG00000003045	-	74	58.940	Ciona_savignyi
ENSEBUG00000004479	ddx20	95	67.333	ENSODEG00000007653	-	89	67.333	Octodon_degus
ENSEBUG00000004479	ddx20	77	69.008	ENSPTIG00000021955	-	85	69.008	Panthera_tigris_altaica
ENSEBUG00000004479	ddx20	68	70.370	ENSPMAG00000009633	-	100	70.370	Petromyzon_marinus
ENSEBUG00000004479	ddx20	96	61.513	ENSUAMG00000018924	DDX20	54	62.816	Ursus_americanus