EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 26387 bases
Position: chrFYBX02010462.1:1495045-1521431
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006810	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSEBUP00000006818	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007273	-	2841	-	ENSEBUP00000006810	167 (aa)	-	-
ENSEBUT00000007281	-	2423	-	ENSEBUP00000006818	180 (aa)	-	-
ENSEBUT00000007288	-	2342	-	ENSEBUP00000006825	153 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004484	-	96	30.055	ENSEBUG00000013459	arfrp1	76	30.055
ENSEBUG00000004484	-	90	43.787	ENSEBUG00000007051	-	86	43.787
ENSEBUG00000004484	-	90	33.775	ENSEBUG00000016029	-	74	31.707
ENSEBUG00000004484	-	91	41.317	ENSEBUG00000011004	arl6	90	41.317
ENSEBUG00000004484	-	85	33.803	ENSEBUG00000011723	sar1b	71	33.803
ENSEBUG00000004484	-	84	34.752	ENSEBUG00000006528	arl13b	53	34.752
ENSEBUG00000004484	-	89	49.693	ENSEBUG00000005056	arl4aa	77	49.693
ENSEBUG00000004484	-	99	70.950	ENSEBUG00000014420	-	99	70.950
ENSEBUG00000004484	-	75	40.625	ENSEBUG00000016195	arl15b	69	40.800
ENSEBUG00000004484	-	92	44.253	ENSEBUG00000014954	arl2	77	44.253
ENSEBUG00000004484	-	98	30.769	ENSEBUG00000016527	-	75	30.769
ENSEBUG00000004484	-	99	66.854	ENSEBUG00000005272	arf2b	86	66.854
ENSEBUG00000004484	-	88	48.667	ENSEBUG00000004741	arl4cb	73	50.000
ENSEBUG00000004484	-	91	32.680	ENSEBUG00000009183	arl8ba	90	30.357
ENSEBUG00000004484	-	98	44.068	ENSEBUG00000016214	arl8	98	44.068
ENSEBUG00000004484	-	91	34.641	ENSEBUG00000010483	-	89	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004484	-	99	69.274	ENSG00000004059	ARF5	100	69.737	Homo_sapiens
ENSEBUG00000004484	-	99	71.508	ENSAPOG00000000667	-	99	71.508	Acanthochromis_polyacanthus
ENSEBUG00000004484	-	99	69.274	ENSAMEG00000004635	ARF5	99	69.274	Ailuropoda_melanoleuca
ENSEBUG00000004484	-	99	71.508	ENSACIG00000000467	-	99	71.508	Amphilophus_citrinellus
ENSEBUG00000004484	-	99	65.730	ENSACIG00000014610	zgc:110286	99	65.730	Amphilophus_citrinellus
ENSEBUG00000004484	-	99	69.832	ENSACIG00000005843	arf5	99	69.832	Amphilophus_citrinellus
ENSEBUG00000004484	-	99	72.067	ENSAOCG00000008113	-	99	72.067	Amphiprion_ocellaris
ENSEBUG00000004484	-	99	69.832	ENSAOCG00000023329	arf5	99	69.832	Amphiprion_ocellaris
ENSEBUG00000004484	-	99	69.832	ENSAPEG00000024614	arf5	99	69.832	Amphiprion_percula
ENSEBUG00000004484	-	99	72.067	ENSAPEG00000003087	-	99	72.067	Amphiprion_percula
ENSEBUG00000004484	-	99	72.626	ENSATEG00000001302	-	99	72.626	Anabas_testudineus
ENSEBUG00000004484	-	99	69.832	ENSATEG00000003053	ARF5	99	69.832	Anabas_testudineus
ENSEBUG00000004484	-	99	69.274	ENSANAG00000026446	ARF5	99	69.274	Aotus_nancymaae
ENSEBUG00000004484	-	99	71.508	ENSACLG00000025604	-	99	71.508	Astatotilapia_calliptera
ENSEBUG00000004484	-	99	69.832	ENSACLG00000005705	arf5	99	69.832	Astatotilapia_calliptera
ENSEBUG00000004484	-	99	68.715	ENSAMXG00000031774	ARF5	99	68.715	Astyanax_mexicanus
ENSEBUG00000004484	-	99	69.832	ENSAMXG00000004249	-	99	69.832	Astyanax_mexicanus
ENSEBUG00000004484	-	99	69.832	ENSAMXG00000038224	-	99	69.832	Astyanax_mexicanus
ENSEBUG00000004484	-	99	71.508	ENSAMXG00000031467	arf4a	99	71.508	Astyanax_mexicanus
ENSEBUG00000004484	-	99	69.274	ENSBTAG00000009366	ARF5	99	69.274	Bos_taurus
ENSEBUG00000004484	-	99	70.950	WBGene00000183	arf-3	99	70.950	Caenorhabditis_elegans
ENSEBUG00000004484	-	99	69.274	ENSCJAG00000017604	ARF5	99	69.274	Callithrix_jacchus
ENSEBUG00000004484	-	92	69.935	ENSCAFG00020021629	ARF5	99	58.216	Canis_lupus_dingo
ENSEBUG00000004484	-	99	69.274	ENSCHIG00000018906	ARF5	99	69.274	Capra_hircus
ENSEBUG00000004484	-	99	67.778	ENSCPOG00000006239	ARF5	99	67.778	Cavia_porcellus
ENSEBUG00000004484	-	99	69.274	ENSCCAG00000027943	-	99	69.274	Cebus_capucinus
ENSEBUG00000004484	-	99	69.274	ENSCATG00000010217	ARF5	99	69.274	Cercocebus_atys
ENSEBUG00000004484	-	99	69.274	ENSCLAG00000007930	ARF5	99	69.274	Chinchilla_lanigera
ENSEBUG00000004484	-	99	69.274	ENSCSAG00000010208	ARF5	99	69.274	Chlorocebus_sabaeus
ENSEBUG00000004484	-	99	69.274	ENSCING00000004846	-	99	69.274	Ciona_intestinalis
ENSEBUG00000004484	-	99	67.403	ENSCSAVG00000001959	-	99	67.403	Ciona_savignyi
ENSEBUG00000004484	-	89	69.375	ENSCANG00000037234	ARF5	98	69.375	Colobus_angolensis_palliatus
ENSEBUG00000004484	-	99	69.274	ENSCGRG00001024919	Arf5	99	69.274	Cricetulus_griseus_chok1gshd
ENSEBUG00000004484	-	99	67.598	ENSCSEG00000006004	arf5	99	67.598	Cynoglossus_semilaevis
ENSEBUG00000004484	-	99	71.508	ENSCVAG00000011381	-	99	71.508	Cyprinodon_variegatus
ENSEBUG00000004484	-	99	69.832	ENSCVAG00000009124	ARF5	99	69.832	Cyprinodon_variegatus
ENSEBUG00000004484	-	99	69.832	ENSCVAG00000007314	-	99	69.832	Cyprinodon_variegatus
ENSEBUG00000004484	-	99	69.832	ENSDARG00000070472	arf5	99	69.832	Danio_rerio
ENSEBUG00000004484	-	99	61.111	ENSDARG00000074210	ARF5	88	61.111	Danio_rerio
ENSEBUG00000004484	-	99	69.832	ENSDARG00000113899	zgc:77650	99	69.832	Danio_rerio
ENSEBUG00000004484	-	99	70.950	ENSDARG00000045989	arf4a	99	70.950	Danio_rerio
ENSEBUG00000004484	-	99	69.274	ENSDORG00000000325	Arf5	99	69.274	Dipodomys_ordii
ENSEBUG00000004484	-	99	70.950	FBgn0013749	Arf102F	99	70.950	Drosophila_melanogaster
ENSEBUG00000004484	-	97	67.241	ENSETEG00000009275	ARF5	99	67.241	Echinops_telfairi
ENSEBUG00000004484	-	99	67.598	ENSELUG00000014428	arf4	99	67.598	Esox_lucius
ENSEBUG00000004484	-	99	69.274	ENSFCAG00000005482	ARF5	99	69.274	Felis_catus
ENSEBUG00000004484	-	99	69.832	ENSFHEG00000023119	arf5	99	69.832	Fundulus_heteroclitus
ENSEBUG00000004484	-	99	69.832	ENSGMOG00000008747	arf5	99	69.832	Gadus_morhua
ENSEBUG00000004484	-	99	70.391	ENSGMOG00000019109	-	99	70.391	Gadus_morhua
ENSEBUG00000004484	-	99	69.832	ENSGAFG00000018703	arf5	99	69.832	Gambusia_affinis
ENSEBUG00000004484	-	99	71.508	ENSGAFG00000005163	-	99	71.508	Gambusia_affinis
ENSEBUG00000004484	-	99	69.832	ENSGACG00000000686	arf5	99	69.832	Gasterosteus_aculeatus
ENSEBUG00000004484	-	99	70.391	ENSGACG00000012500	-	99	70.391	Gasterosteus_aculeatus
ENSEBUG00000004484	-	99	69.832	ENSGAGG00000000231	ARF5	99	69.832	Gopherus_agassizii
ENSEBUG00000004484	-	99	69.274	ENSGGOG00000016749	ARF5	99	69.274	Gorilla_gorilla
ENSEBUG00000004484	-	99	71.508	ENSHBUG00000011041	-	99	71.508	Haplochromis_burtoni
ENSEBUG00000004484	-	99	69.832	ENSHBUG00000008546	arf5	99	69.832	Haplochromis_burtoni
ENSEBUG00000004484	-	99	69.274	ENSHGLG00000007494	ARF5	99	69.274	Heterocephalus_glaber_female
ENSEBUG00000004484	-	99	68.156	ENSHGLG00100006040	ARF5	60	68.156	Heterocephalus_glaber_male
ENSEBUG00000004484	-	99	71.508	ENSHCOG00000015577	-	100	71.508	Hippocampus_comes
ENSEBUG00000004484	-	99	70.391	ENSIPUG00000007016	arf4	99	70.391	Ictalurus_punctatus
ENSEBUG00000004484	-	99	69.832	ENSIPUG00000004159	Arf5	99	69.832	Ictalurus_punctatus
ENSEBUG00000004484	-	99	64.246	ENSIPUG00000006913	-	70	64.246	Ictalurus_punctatus
ENSEBUG00000004484	-	99	69.832	ENSIPUG00000004215	arf5	99	69.832	Ictalurus_punctatus
ENSEBUG00000004484	-	99	69.274	ENSSTOG00000002104	ARF5	99	69.274	Ictidomys_tridecemlineatus
ENSEBUG00000004484	-	99	69.274	ENSJJAG00000005105	Arf5	99	69.274	Jaculus_jaculus
ENSEBUG00000004484	-	99	72.067	ENSKMAG00000012816	-	99	72.067	Kryptolebias_marmoratus
ENSEBUG00000004484	-	99	71.508	ENSLBEG00000026532	arf5	99	71.508	Labrus_bergylta
ENSEBUG00000004484	-	98	71.186	ENSLBEG00000012002	-	98	71.186	Labrus_bergylta
ENSEBUG00000004484	-	99	69.274	ENSLAFG00000011469	ARF5	99	69.274	Loxodonta_africana
ENSEBUG00000004484	-	99	69.274	ENSMFAG00000019772	ARF5	99	69.274	Macaca_fascicularis
ENSEBUG00000004484	-	99	69.274	ENSMMUG00000046381	ARF5	99	69.274	Macaca_mulatta
ENSEBUG00000004484	-	99	69.274	ENSMNEG00000040893	ARF5	99	69.274	Macaca_nemestrina
ENSEBUG00000004484	-	99	72.626	ENSMAMG00000008223	-	99	72.626	Mastacembelus_armatus
ENSEBUG00000004484	-	99	69.832	ENSMAMG00000021160	arf5	99	69.832	Mastacembelus_armatus
ENSEBUG00000004484	-	99	69.832	ENSMZEG00005015033	arf5	66	69.832	Maylandia_zebra
ENSEBUG00000004484	-	91	71.341	ENSMZEG00005019741	-	98	71.341	Maylandia_zebra
ENSEBUG00000004484	-	99	69.274	ENSMAUG00000014825	Arf5	99	69.274	Mesocricetus_auratus
ENSEBUG00000004484	-	99	69.274	ENSMICG00000000091	ARF5	99	69.274	Microcebus_murinus
ENSEBUG00000004484	-	99	69.274	ENSMOCG00000022861	Arf5	99	69.274	Microtus_ochrogaster
ENSEBUG00000004484	-	99	69.832	ENSMODG00000015229	ARF5	99	69.832	Monodelphis_domestica
ENSEBUG00000004484	-	99	69.832	ENSMALG00000010117	-	99	69.832	Monopterus_albus
ENSEBUG00000004484	-	99	65.363	ENSMALG00000022638	zgc:110286	100	65.363	Monopterus_albus
ENSEBUG00000004484	-	99	72.626	ENSMALG00000006020	-	99	72.626	Monopterus_albus
ENSEBUG00000004484	-	99	69.274	MGP_CAROLIEiJ_G0028156	Arf5	99	69.274	Mus_caroli
ENSEBUG00000004484	-	99	69.274	ENSMUSG00000020440	Arf5	99	69.274	Mus_musculus
ENSEBUG00000004484	-	99	69.274	MGP_PahariEiJ_G0021914	Arf5	99	69.274	Mus_pahari
ENSEBUG00000004484	-	99	69.274	MGP_SPRETEiJ_G0029156	Arf5	99	69.274	Mus_spretus
ENSEBUG00000004484	-	99	69.274	ENSMPUG00000006675	ARF5	99	69.274	Mustela_putorius_furo
ENSEBUG00000004484	-	99	69.274	ENSMLUG00000017122	ARF5	99	69.274	Myotis_lucifugus
ENSEBUG00000004484	-	99	69.274	ENSNGAG00000011743	Arf5	99	69.274	Nannospalax_galili
ENSEBUG00000004484	-	99	69.832	ENSNBRG00000018854	arf5	99	69.832	Neolamprologus_brichardi
ENSEBUG00000004484	-	99	69.274	ENSODEG00000011800	ARF5	99	69.274	Octodon_degus
ENSEBUG00000004484	-	99	71.508	ENSONIG00000014890	-	99	71.508	Oreochromis_niloticus
ENSEBUG00000004484	-	99	69.832	ENSONIG00000007594	arf5	99	69.832	Oreochromis_niloticus
ENSEBUG00000004484	-	99	69.274	ENSOCUG00000024365	ARF5	99	69.274	Oryctolagus_cuniculus
ENSEBUG00000004484	-	99	71.508	ENSORLG00020001755	-	99	71.508	Oryzias_latipes_hni
ENSEBUG00000004484	-	99	69.832	ENSOMEG00000020821	ARF5	99	69.832	Oryzias_melastigma
ENSEBUG00000004484	-	99	71.508	ENSOMEG00000000211	-	64	71.508	Oryzias_melastigma
ENSEBUG00000004484	-	99	69.274	ENSOGAG00000013336	ARF5	99	69.274	Otolemur_garnettii
ENSEBUG00000004484	-	99	69.274	ENSPPAG00000037755	ARF5	99	69.274	Pan_paniscus
ENSEBUG00000004484	-	99	69.274	ENSPPRG00000004674	ARF5	99	69.274	Panthera_pardus
ENSEBUG00000004484	-	99	69.274	ENSPTRG00000019651	ARF5	99	69.274	Pan_troglodytes
ENSEBUG00000004484	-	99	69.274	ENSPANG00000032970	ARF5	99	69.274	Papio_anubis
ENSEBUG00000004484	-	99	69.274	ENSPKIG00000013814	-	99	69.274	Paramormyrops_kingsleyae
ENSEBUG00000004484	-	99	69.832	ENSPKIG00000025381	-	99	69.832	Paramormyrops_kingsleyae
ENSEBUG00000004484	-	99	70.391	ENSPKIG00000025349	arf4a	99	70.391	Paramormyrops_kingsleyae
ENSEBUG00000004484	-	99	72.067	ENSPMGG00000009985	-	99	72.067	Periophthalmus_magnuspinnatus
ENSEBUG00000004484	-	99	69.274	ENSPEMG00000021476	Arf5	99	69.274	Peromyscus_maniculatus_bairdii
ENSEBUG00000004484	-	99	67.598	ENSPMAG00000009600	arf4a	100	67.598	Petromyzon_marinus
ENSEBUG00000004484	-	99	69.832	ENSPFOG00000015817	arf5	99	69.832	Poecilia_formosa
ENSEBUG00000004484	-	99	71.111	ENSPFOG00000017992	-	99	71.111	Poecilia_formosa
ENSEBUG00000004484	-	99	69.832	ENSPLAG00000006742	arf5	99	69.832	Poecilia_latipinna
ENSEBUG00000004484	-	99	71.508	ENSPLAG00000015630	-	99	71.508	Poecilia_latipinna
ENSEBUG00000004484	-	99	71.508	ENSPMEG00000004624	-	99	71.508	Poecilia_mexicana
ENSEBUG00000004484	-	99	69.832	ENSPMEG00000009605	arf5	99	69.832	Poecilia_mexicana
ENSEBUG00000004484	-	99	69.274	ENSPCOG00000027640	ARF5	99	69.274	Propithecus_coquereli
ENSEBUG00000004484	-	99	69.274	ENSPVAG00000013940	ARF5	99	69.274	Pteropus_vampyrus
ENSEBUG00000004484	-	99	71.508	ENSPNYG00000004931	-	99	71.508	Pundamilia_nyererei
ENSEBUG00000004484	-	99	69.832	ENSPNYG00000001663	arf5	99	69.832	Pundamilia_nyererei
ENSEBUG00000004484	-	99	70.950	ENSPNAG00000004745	arf4a	99	70.950	Pygocentrus_nattereri
ENSEBUG00000004484	-	99	68.156	ENSPNAG00000005054	-	99	68.156	Pygocentrus_nattereri
ENSEBUG00000004484	-	99	69.832	ENSPNAG00000024427	-	99	69.832	Pygocentrus_nattereri
ENSEBUG00000004484	-	99	64.804	ENSPNAG00000004475	-	99	64.804	Pygocentrus_nattereri
ENSEBUG00000004484	-	99	69.274	ENSRNOG00000007806	Arf5	99	69.274	Rattus_norvegicus
ENSEBUG00000004484	-	99	69.274	ENSRBIG00000039868	ARF5	99	69.274	Rhinopithecus_bieti
ENSEBUG00000004484	-	99	69.274	ENSRROG00000041157	ARF5	99	69.274	Rhinopithecus_roxellana
ENSEBUG00000004484	-	99	69.274	ENSSBOG00000021669	ARF5	99	69.274	Saimiri_boliviensis_boliviensis
ENSEBUG00000004484	-	99	69.274	ENSSHAG00000015053	ARF5	99	69.274	Sarcophilus_harrisii
ENSEBUG00000004484	-	99	65.363	ENSSFOG00015007701	-	99	65.363	Scleropages_formosus
ENSEBUG00000004484	-	99	70.391	ENSSFOG00015020707	ARF5	99	70.391	Scleropages_formosus
ENSEBUG00000004484	-	99	69.832	ENSSMAG00000011361	arf5	99	69.832	Scophthalmus_maximus
ENSEBUG00000004484	-	99	72.067	ENSSMAG00000004541	-	99	72.067	Scophthalmus_maximus
ENSEBUG00000004484	-	99	69.832	ENSSDUG00000005105	arf5	99	69.832	Seriola_dumerili
ENSEBUG00000004484	-	99	69.832	ENSSLDG00000017188	arf5	99	69.832	Seriola_lalandi_dorsalis
ENSEBUG00000004484	-	99	72.626	ENSSPAG00000022680	-	99	72.626	Stegastes_partitus
ENSEBUG00000004484	-	99	69.832	ENSSPAG00000014434	arf5	99	69.832	Stegastes_partitus
ENSEBUG00000004484	-	99	69.274	ENSSSCG00000016593	ARF5	99	69.274	Sus_scrofa
ENSEBUG00000004484	-	99	73.184	ENSTRUG00000025462	-	100	73.184	Takifugu_rubripes
ENSEBUG00000004484	-	99	70.391	ENSTNIG00000003348	arf5	100	70.391	Tetraodon_nigroviridis
ENSEBUG00000004484	-	99	72.067	ENSTNIG00000017954	-	100	72.067	Tetraodon_nigroviridis
ENSEBUG00000004484	-	89	70.807	ENSTTRG00000006043	ARF5	99	70.807	Tursiops_truncatus
ENSEBUG00000004484	-	99	69.274	ENSUAMG00000012982	ARF5	99	69.274	Ursus_americanus
ENSEBUG00000004484	-	99	69.274	ENSVVUG00000007062	ARF5	99	69.274	Vulpes_vulpes
ENSEBUG00000004484	-	99	71.508	ENSXCOG00000020384	-	99	71.508	Xiphophorus_couchianus
ENSEBUG00000004484	-	99	69.832	ENSXMAG00000015306	arf5	99	69.832	Xiphophorus_maculatus
ENSEBUG00000004484	-	99	71.508	ENSXMAG00000004558	-	99	71.508	Xiphophorus_maculatus