EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004516 (Gene tree)
Gene ID: -
Gene Symbol: thoc3
Alias: zgc:100815
Full Name: THO complex 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 113829 bases
Position: chrFYBX02010105.1:362830-476658
Accession: ZDB-GENE-040808-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006861	eIF2A	PF08662.11	3e-10	1	1
ENSEBUP00000006871	eIF2A	PF08662.11	3e-10	1	1
ENSEBUP00000006885	eIF2A	PF08662.11	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007336	-	2430	-	ENSEBUP00000006871	324 (aa)	-	-
ENSEBUT00000007325	-	3184	-	ENSEBUP00000006861	324 (aa)	-	-
ENSEBUT00000007350	-	3516	-	ENSEBUP00000006885	288 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004516	thoc3	68	32.292	ENSEBUG00000010267	wdr61	50	32.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004516	thoc3	99	84.783	ENSG00000051596	THOC3	91	84.783	Homo_sapiens
ENSEBUG00000004516	thoc3	100	85.185	ENSAPOG00000010591	thoc3	100	85.185	Acanthochromis_polyacanthus
ENSEBUG00000004516	thoc3	99	85.093	ENSAMEG00000006936	THOC3	91	85.093	Ailuropoda_melanoleuca
ENSEBUG00000004516	thoc3	100	83.642	ENSACIG00000010364	thoc3	100	83.642	Amphilophus_citrinellus
ENSEBUG00000004516	thoc3	100	84.877	ENSAOCG00000013548	thoc3	100	84.877	Amphiprion_ocellaris
ENSEBUG00000004516	thoc3	100	84.877	ENSAPEG00000003216	thoc3	100	84.877	Amphiprion_percula
ENSEBUG00000004516	thoc3	100	84.568	ENSATEG00000017937	thoc3	100	84.568	Anabas_testudineus
ENSEBUG00000004516	thoc3	99	84.783	ENSANAG00000036291	THOC3	91	84.783	Aotus_nancymaae
ENSEBUG00000004516	thoc3	100	84.568	ENSACLG00000017219	thoc3	100	84.568	Astatotilapia_calliptera
ENSEBUG00000004516	thoc3	100	84.877	ENSAMXG00000010750	thoc3	100	84.877	Astyanax_mexicanus
ENSEBUG00000004516	thoc3	99	85.093	ENSBTAG00000035174	THOC3	91	85.093	Bos_taurus
ENSEBUG00000004516	thoc3	99	84.161	ENSCJAG00000046031	THOC3	86	84.161	Callithrix_jacchus
ENSEBUG00000004516	thoc3	99	85.093	ENSCAFG00000014320	THOC3	91	85.093	Canis_familiaris
ENSEBUG00000004516	thoc3	99	85.093	ENSCAFG00020011477	THOC3	91	85.093	Canis_lupus_dingo
ENSEBUG00000004516	thoc3	99	85.093	ENSCHIG00000021665	THOC3	91	85.093	Capra_hircus
ENSEBUG00000004516	thoc3	96	65.705	ENSTSYG00000009507	-	91	65.705	Carlito_syrichta
ENSEBUG00000004516	thoc3	99	66.667	ENSCPOG00000025805	THOC3	89	70.405	Cavia_porcellus
ENSEBUG00000004516	thoc3	99	84.783	ENSCATG00000029038	THOC3	91	84.783	Cercocebus_atys
ENSEBUG00000004516	thoc3	99	84.735	ENSCLAG00000015924	THOC3	91	84.735	Chinchilla_lanigera
ENSEBUG00000004516	thoc3	99	84.783	ENSCSAG00000009454	THOC3	91	84.783	Chlorocebus_sabaeus
ENSEBUG00000004516	thoc3	82	87.970	ENSCPBG00000022672	THOC3	81	87.970	Chrysemys_picta_bellii
ENSEBUG00000004516	thoc3	98	66.144	ENSCSAVG00000011041	-	99	66.144	Ciona_savignyi
ENSEBUG00000004516	thoc3	99	84.783	ENSCANG00000008964	THOC3	91	84.783	Colobus_angolensis_palliatus
ENSEBUG00000004516	thoc3	99	84.783	ENSCGRG00001022944	Thoc3	84	84.783	Cricetulus_griseus_chok1gshd
ENSEBUG00000004516	thoc3	99	84.783	ENSCGRG00000012133	Thoc3	91	84.783	Cricetulus_griseus_crigri
ENSEBUG00000004516	thoc3	100	84.259	ENSCVAG00000006941	thoc3	100	84.259	Cyprinodon_variegatus
ENSEBUG00000004516	thoc3	100	84.568	ENSDARG00000056517	thoc3	100	84.568	Danio_rerio
ENSEBUG00000004516	thoc3	99	84.783	ENSDNOG00000037214	THOC3	91	84.783	Dasypus_novemcinctus
ENSEBUG00000004516	thoc3	81	87.879	ENSDORG00000014084	Thoc3	89	87.879	Dipodomys_ordii
ENSEBUG00000004516	thoc3	98	63.608	FBgn0037569	tex	98	63.608	Drosophila_melanogaster
ENSEBUG00000004516	thoc3	99	84.161	ENSETEG00000020137	THOC3	91	84.161	Echinops_telfairi
ENSEBUG00000004516	thoc3	99	85.093	ENSEASG00005011970	THOC3	91	85.093	Equus_asinus_asinus
ENSEBUG00000004516	thoc3	99	85.093	ENSECAG00000011555	THOC3	91	85.093	Equus_caballus
ENSEBUG00000004516	thoc3	100	83.951	ENSELUG00000022058	thoc3	100	83.951	Esox_lucius
ENSEBUG00000004516	thoc3	100	84.923	ENSFALG00000008536	THOC3	95	84.923	Ficedula_albicollis
ENSEBUG00000004516	thoc3	99	84.735	ENSFDAG00000015062	THOC3	91	84.735	Fukomys_damarensis
ENSEBUG00000004516	thoc3	100	83.642	ENSFHEG00000019958	thoc3	100	83.642	Fundulus_heteroclitus
ENSEBUG00000004516	thoc3	100	83.025	ENSGMOG00000019136	-	100	83.025	Gadus_morhua
ENSEBUG00000004516	thoc3	99	84.112	ENSGALG00000024172	THOC3	84	84.112	Gallus_gallus
ENSEBUG00000004516	thoc3	100	83.333	ENSGAFG00000016531	thoc3	98	83.333	Gambusia_affinis
ENSEBUG00000004516	thoc3	100	83.951	ENSGACG00000016353	thoc3	100	83.951	Gasterosteus_aculeatus
ENSEBUG00000004516	thoc3	100	84.923	ENSGAGG00000013237	THOC3	100	84.923	Gopherus_agassizii
ENSEBUG00000004516	thoc3	99	84.783	ENSGGOG00000012127	-	91	84.783	Gorilla_gorilla
ENSEBUG00000004516	thoc3	100	84.568	ENSHBUG00000023812	thoc3	100	84.568	Haplochromis_burtoni
ENSEBUG00000004516	thoc3	99	84.472	ENSHGLG00000008773	THOC3	91	84.472	Heterocephalus_glaber_female
ENSEBUG00000004516	thoc3	99	84.472	ENSHGLG00100013354	THOC3	91	84.472	Heterocephalus_glaber_male
ENSEBUG00000004516	thoc3	100	82.407	ENSHCOG00000003522	thoc3	100	82.407	Hippocampus_comes
ENSEBUG00000004516	thoc3	100	84.259	ENSIPUG00000001292	thoc3	95	84.259	Ictalurus_punctatus
ENSEBUG00000004516	thoc3	99	84.375	ENSJJAG00000010704	Thoc3	91	84.375	Jaculus_jaculus
ENSEBUG00000004516	thoc3	100	83.642	ENSKMAG00000017815	thoc3	100	83.642	Kryptolebias_marmoratus
ENSEBUG00000004516	thoc3	100	83.951	ENSLBEG00000006512	thoc3	100	83.951	Labrus_bergylta
ENSEBUG00000004516	thoc3	100	86.111	ENSLACG00000014556	THOC3	100	86.111	Latimeria_chalumnae
ENSEBUG00000004516	thoc3	100	85.494	ENSLOCG00000011610	thoc3	99	85.494	Lepisosteus_oculatus
ENSEBUG00000004516	thoc3	99	84.472	ENSLAFG00000016609	THOC3	91	84.472	Loxodonta_africana
ENSEBUG00000004516	thoc3	99	84.783	ENSMFAG00000034476	THOC3	91	84.783	Macaca_fascicularis
ENSEBUG00000004516	thoc3	99	84.783	ENSMMUG00000018737	THOC3	91	84.783	Macaca_mulatta
ENSEBUG00000004516	thoc3	99	84.783	ENSMNEG00000043023	THOC3	91	84.783	Macaca_nemestrina
ENSEBUG00000004516	thoc3	99	84.783	ENSMLEG00000002508	THOC3	91	84.783	Mandrillus_leucophaeus
ENSEBUG00000004516	thoc3	100	84.877	ENSMAMG00000013229	thoc3	99	85.312	Mastacembelus_armatus
ENSEBUG00000004516	thoc3	100	84.568	ENSMZEG00005020327	thoc3	100	84.568	Maylandia_zebra
ENSEBUG00000004516	thoc3	85	85.306	ENSMGAG00000004766	THOC3	99	88.302	Meleagris_gallopavo
ENSEBUG00000004516	thoc3	99	84.783	ENSMAUG00000011225	Thoc3	91	84.783	Mesocricetus_auratus
ENSEBUG00000004516	thoc3	99	85.714	ENSMICG00000028441	-	91	85.714	Microcebus_murinus
ENSEBUG00000004516	thoc3	99	75.155	ENSMICG00000031354	-	91	75.155	Microcebus_murinus
ENSEBUG00000004516	thoc3	99	84.783	ENSMOCG00000015290	Thoc3	91	84.783	Microtus_ochrogaster
ENSEBUG00000004516	thoc3	100	84.568	ENSMMOG00000000373	thoc3	100	84.568	Mola_mola
ENSEBUG00000004516	thoc3	99	84.783	ENSMODG00000005339	THOC3	91	84.783	Monodelphis_domestica
ENSEBUG00000004516	thoc3	99	72.671	ENSMODG00000025275	-	97	72.671	Monodelphis_domestica
ENSEBUG00000004516	thoc3	100	84.568	ENSMALG00000002645	thoc3	100	84.568	Monopterus_albus
ENSEBUG00000004516	thoc3	99	84.783	MGP_CAROLIEiJ_G0018534	Thoc3	91	84.783	Mus_caroli
ENSEBUG00000004516	thoc3	99	84.783	ENSMUSG00000025872	Thoc3	91	84.783	Mus_musculus
ENSEBUG00000004516	thoc3	99	84.783	MGP_PahariEiJ_G0019599	Thoc3	91	84.783	Mus_pahari
ENSEBUG00000004516	thoc3	99	84.783	MGP_SPRETEiJ_G0019414	Thoc3	91	84.783	Mus_spretus
ENSEBUG00000004516	thoc3	93	84.015	ENSMPUG00000012598	THOC3	77	82.545	Mustela_putorius_furo
ENSEBUG00000004516	thoc3	99	82.919	ENSMLUG00000027411	-	93	82.919	Myotis_lucifugus
ENSEBUG00000004516	thoc3	99	85.404	ENSMLUG00000005412	-	91	85.404	Myotis_lucifugus
ENSEBUG00000004516	thoc3	99	80.745	ENSMLUG00000026903	-	93	80.745	Myotis_lucifugus
ENSEBUG00000004516	thoc3	99	84.783	ENSNGAG00000010934	-	91	84.783	Nannospalax_galili
ENSEBUG00000004516	thoc3	99	85.000	ENSNBRG00000013917	thoc3	92	85.000	Neolamprologus_brichardi
ENSEBUG00000004516	thoc3	99	84.472	ENSNLEG00000000593	THOC3	91	84.472	Nomascus_leucogenys
ENSEBUG00000004516	thoc3	98	65.723	ENSMEUG00000013439	-	97	65.723	Notamacropus_eugenii
ENSEBUG00000004516	thoc3	99	84.783	ENSMEUG00000001068	THOC3	91	84.783	Notamacropus_eugenii
ENSEBUG00000004516	thoc3	99	84.735	ENSODEG00000010186	THOC3	91	84.735	Octodon_degus
ENSEBUG00000004516	thoc3	100	84.259	ENSONIG00000004291	thoc3	100	84.259	Oreochromis_niloticus
ENSEBUG00000004516	thoc3	99	84.783	ENSOCUG00000016387	THOC3	91	84.783	Oryctolagus_cuniculus
ENSEBUG00000004516	thoc3	100	84.568	ENSORLG00000030384	thoc3	92	84.568	Oryzias_latipes
ENSEBUG00000004516	thoc3	100	84.568	ENSORLG00020016372	thoc3	100	84.568	Oryzias_latipes_hni
ENSEBUG00000004516	thoc3	100	84.568	ENSORLG00015000336	thoc3	100	84.568	Oryzias_latipes_hsok
ENSEBUG00000004516	thoc3	100	84.877	ENSOMEG00000021977	thoc3	100	84.877	Oryzias_melastigma
ENSEBUG00000004516	thoc3	99	84.783	ENSOGAG00000003503	THOC3	91	84.783	Otolemur_garnettii
ENSEBUG00000004516	thoc3	99	82.298	ENSOARG00000016600	THOC3	91	82.298	Ovis_aries
ENSEBUG00000004516	thoc3	99	84.783	ENSPPAG00000006020	THOC3	91	84.783	Pan_paniscus
ENSEBUG00000004516	thoc3	99	85.093	ENSPPRG00000020316	THOC3	91	85.093	Panthera_pardus
ENSEBUG00000004516	thoc3	81	87.879	ENSPTIG00000011325	THOC3	75	87.879	Panthera_tigris_altaica
ENSEBUG00000004516	thoc3	99	84.783	ENSPTRG00000017594	THOC3	91	84.783	Pan_troglodytes
ENSEBUG00000004516	thoc3	99	84.783	ENSPANG00000012114	THOC3	91	84.783	Papio_anubis
ENSEBUG00000004516	thoc3	100	83.642	ENSPKIG00000000208	thoc3	100	83.642	Paramormyrops_kingsleyae
ENSEBUG00000004516	thoc3	100	83.025	ENSPMGG00000017949	thoc3	100	83.025	Periophthalmus_magnuspinnatus
ENSEBUG00000004516	thoc3	99	84.783	ENSPEMG00000003118	Thoc3	91	84.783	Peromyscus_maniculatus_bairdii
ENSEBUG00000004516	thoc3	98	88.608	ENSPMAG00000007069	thoc3	98	88.608	Petromyzon_marinus
ENSEBUG00000004516	thoc3	100	83.951	ENSPFOG00000007685	thoc3	92	83.951	Poecilia_formosa
ENSEBUG00000004516	thoc3	100	83.951	ENSPLAG00000003581	thoc3	98	83.951	Poecilia_latipinna
ENSEBUG00000004516	thoc3	100	83.951	ENSPMEG00000005565	thoc3	98	83.951	Poecilia_mexicana
ENSEBUG00000004516	thoc3	100	83.951	ENSPREG00000014916	thoc3	92	83.951	Poecilia_reticulata
ENSEBUG00000004516	thoc3	99	84.783	ENSPPYG00000016066	THOC3	91	84.783	Pongo_abelii
ENSEBUG00000004516	thoc3	99	84.783	ENSPCOG00000023245	THOC3	91	84.783	Propithecus_coquereli
ENSEBUG00000004516	thoc3	99	84.783	ENSPVAG00000012450	THOC3	91	84.783	Pteropus_vampyrus
ENSEBUG00000004516	thoc3	100	84.568	ENSPNYG00000016612	thoc3	100	84.568	Pundamilia_nyererei
ENSEBUG00000004516	thoc3	100	84.568	ENSPNAG00000005252	thoc3	100	84.568	Pygocentrus_nattereri
ENSEBUG00000004516	thoc3	99	84.783	ENSRNOG00000000104	Thoc3	91	84.783	Rattus_norvegicus
ENSEBUG00000004516	thoc3	99	84.783	ENSRBIG00000039571	THOC3	91	84.783	Rhinopithecus_bieti
ENSEBUG00000004516	thoc3	99	84.783	ENSRROG00000031032	THOC3	91	84.783	Rhinopithecus_roxellana
ENSEBUG00000004516	thoc3	99	84.783	ENSSBOG00000022663	THOC3	91	84.783	Saimiri_boliviensis_boliviensis
ENSEBUG00000004516	thoc3	98	85.443	ENSSHAG00000010757	THOC3	88	85.443	Sarcophilus_harrisii
ENSEBUG00000004516	thoc3	98	68.868	ENSSHAG00000013075	-	90	68.868	Sarcophilus_harrisii
ENSEBUG00000004516	thoc3	100	84.877	ENSSFOG00015001867	thoc3	93	84.877	Scleropages_formosus
ENSEBUG00000004516	thoc3	100	84.568	ENSSMAG00000006786	thoc3	100	84.568	Scophthalmus_maximus
ENSEBUG00000004516	thoc3	100	84.568	ENSSDUG00000008924	thoc3	100	84.568	Seriola_dumerili
ENSEBUG00000004516	thoc3	100	84.568	ENSSLDG00000019128	thoc3	100	84.568	Seriola_lalandi_dorsalis
ENSEBUG00000004516	thoc3	99	85.093	ENSSPUG00000006652	THOC3	99	85.093	Sphenodon_punctatus
ENSEBUG00000004516	thoc3	100	84.877	ENSSPAG00000014229	thoc3	100	84.877	Stegastes_partitus
ENSEBUG00000004516	thoc3	99	85.093	ENSSSCG00000014061	THOC3	91	85.093	Sus_scrofa
ENSEBUG00000004516	thoc3	98	83.962	ENSTGUG00000000557	THOC3	100	83.962	Taeniopygia_guttata
ENSEBUG00000004516	thoc3	98	83.912	ENSTRUG00000002925	thoc3	91	83.912	Takifugu_rubripes
ENSEBUG00000004516	thoc3	100	82.407	ENSTNIG00000012958	thoc3	100	82.407	Tetraodon_nigroviridis
ENSEBUG00000004516	thoc3	81	87.879	ENSTTRG00000014865	THOC3	100	87.879	Tursiops_truncatus
ENSEBUG00000004516	thoc3	99	85.093	ENSUAMG00000010691	THOC3	91	85.093	Ursus_americanus
ENSEBUG00000004516	thoc3	99	85.093	ENSUMAG00000024511	THOC3	93	85.093	Ursus_maritimus
ENSEBUG00000004516	thoc3	99	83.333	ENSXETG00000022316	thoc3	99	83.333	Xenopus_tropicalis
ENSEBUG00000004516	thoc3	100	83.951	ENSXCOG00000001378	thoc3	100	83.951	Xiphophorus_couchianus
ENSEBUG00000004516	thoc3	100	83.951	ENSXMAG00000003232	thoc3	98	83.951	Xiphophorus_maculatus