EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000004541 (Gene tree)
Gene ID: -
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 45847 bases
Position: chrFYBX02010642.1:1592765-1638611
Accession: ZDB-GENE-040426-826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000006910	NCBP3	PF10309.9	5.3e-15	1	1
ENSEBUP00000006931	NCBP3	PF10309.9	5.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007396	-	3943	-	ENSEBUP00000006931	617 (aa)	-	-
ENSEBUT00000007375	-	4124	-	ENSEBUP00000006910	617 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004541	ncbp3	92	37.313	ENSAPOG00000020809	ncbp3	93	37.688	Acanthochromis_polyacanthus
ENSEBUG00000004541	ncbp3	91	36.442	ENSACIG00000024257	ncbp3	91	37.778	Amphilophus_citrinellus
ENSEBUG00000004541	ncbp3	92	36.007	ENSAPEG00000020857	ncbp3	93	37.087	Amphiprion_percula
ENSEBUG00000004541	ncbp3	92	37.092	ENSACLG00000000455	ncbp3	92	38.576	Astatotilapia_calliptera
ENSEBUG00000004541	ncbp3	91	35.285	ENSAMXG00000005968	ncbp3	95	36.750	Astyanax_mexicanus
ENSEBUG00000004541	ncbp3	82	47.635	ENSCANG00000033561	NCBP3	96	38.376	Colobus_angolensis_palliatus
ENSEBUG00000004541	ncbp3	95	39.268	ENSCGRG00001018538	Ncbp3	93	39.145	Cricetulus_griseus_chok1gshd
ENSEBUG00000004541	ncbp3	89	37.809	ENSCGRG00000015075	Ncbp3	99	39.054	Cricetulus_griseus_crigri
ENSEBUG00000004541	ncbp3	96	38.254	ENSCSEG00000006375	ncbp3	92	38.110	Cynoglossus_semilaevis
ENSEBUG00000004541	ncbp3	92	35.285	ENSCVAG00000020563	ncbp3	92	36.321	Cyprinodon_variegatus
ENSEBUG00000004541	ncbp3	51	45.886	ENSDNOG00000006490	NCBP3	91	37.681	Dasypus_novemcinctus
ENSEBUG00000004541	ncbp3	91	35.840	ENSFHEG00000005607	ncbp3	92	36.292	Fundulus_heteroclitus
ENSEBUG00000004541	ncbp3	74	40.412	ENSGAFG00000008912	ncbp3	71	41.010	Gambusia_affinis
ENSEBUG00000004541	ncbp3	92	36.672	ENSGACG00000020902	ncbp3	97	37.188	Gasterosteus_aculeatus
ENSEBUG00000004541	ncbp3	63	43.529	ENSHBUG00000019541	ncbp3	94	30.363	Haplochromis_burtoni
ENSEBUG00000004541	ncbp3	51	46.203	ENSHGLG00000015839	NCBP3	97	38.792	Heterocephalus_glaber_female
ENSEBUG00000004541	ncbp3	51	46.203	ENSHGLG00100007256	NCBP3	97	38.792	Heterocephalus_glaber_male
ENSEBUG00000004541	ncbp3	92	36.434	ENSHCOG00000004161	ncbp3	92	37.636	Hippocampus_comes
ENSEBUG00000004541	ncbp3	91	37.645	ENSIPUG00000024397	ncbp3	94	39.172	Ictalurus_punctatus
ENSEBUG00000004541	ncbp3	95	33.993	ENSJJAG00000000634	Ncbp3	97	33.704	Jaculus_jaculus
ENSEBUG00000004541	ncbp3	91	35.890	ENSKMAG00000001932	ncbp3	92	37.747	Kryptolebias_marmoratus
ENSEBUG00000004541	ncbp3	91	35.714	ENSLBEG00000001558	-	92	37.107	Labrus_bergylta
ENSEBUG00000004541	ncbp3	91	35.235	ENSLBEG00000006036	ncbp3	91	36.393	Labrus_bergylta
ENSEBUG00000004541	ncbp3	91	35.043	ENSLACG00000018791	NCBP3	93	36.146	Latimeria_chalumnae
ENSEBUG00000004541	ncbp3	91	38.226	ENSLOCG00000006706	ncbp3	95	38.450	Lepisosteus_oculatus
ENSEBUG00000004541	ncbp3	95	37.355	ENSLAFG00000002067	NCBP3	93	39.116	Loxodonta_africana
ENSEBUG00000004541	ncbp3	51	46.562	ENSMNEG00000041374	NCBP3	91	39.482	Macaca_nemestrina
ENSEBUG00000004541	ncbp3	96	36.575	ENSMAMG00000022461	ncbp3	92	37.406	Mastacembelus_armatus
ENSEBUG00000004541	ncbp3	92	37.252	ENSMZEG00005027802	ncbp3	92	38.411	Maylandia_zebra
ENSEBUG00000004541	ncbp3	95	38.673	ENSMGAG00000004685	NCBP3	99	38.026	Meleagris_gallopavo
ENSEBUG00000004541	ncbp3	51	42.188	ENSMICG00000015798	NCBP3	97	37.246	Microcebus_murinus
ENSEBUG00000004541	ncbp3	95	39.601	ENSMOCG00000016446	Ncbp3	93	38.980	Microtus_ochrogaster
ENSEBUG00000004541	ncbp3	91	37.086	ENSMMOG00000012577	ncbp3	91	37.971	Mola_mola
ENSEBUG00000004541	ncbp3	63	44.891	ENSNBRG00000017354	ncbp3	74	44.161	Neolamprologus_brichardi
ENSEBUG00000004541	ncbp3	51	44.201	ENSOPRG00000016925	NCBP3	97	37.838	Ochotona_princeps
ENSEBUG00000004541	ncbp3	51	46.203	ENSODEG00000016617	NCBP3	97	38.583	Octodon_degus
ENSEBUG00000004541	ncbp3	96	36.442	ENSONIG00000007434	ncbp3	93	37.805	Oreochromis_niloticus
ENSEBUG00000004541	ncbp3	51	45.652	ENSOCUG00000008045	NCBP3	91	38.599	Oryctolagus_cuniculus
ENSEBUG00000004541	ncbp3	95	38.043	ENSORLG00000013703	ncbp3	92	37.795	Oryzias_latipes
ENSEBUG00000004541	ncbp3	95	38.140	ENSORLG00020011764	ncbp3	92	38.035	Oryzias_latipes_hni
ENSEBUG00000004541	ncbp3	95	38.235	ENSORLG00015018733	ncbp3	92	38.291	Oryzias_latipes_hsok
ENSEBUG00000004541	ncbp3	97	37.181	ENSOMEG00000017858	ncbp3	92	39.394	Oryzias_melastigma
ENSEBUG00000004541	ncbp3	78	43.144	ENSPKIG00000008466	ncbp3	76	44.582	Paramormyrops_kingsleyae
ENSEBUG00000004541	ncbp3	83	44.554	ENSPCIG00000008605	NCBP3	93	37.400	Phascolarctos_cinereus
ENSEBUG00000004541	ncbp3	89	37.055	ENSPFOG00000000721	ncbp3	97	38.694	Poecilia_formosa
ENSEBUG00000004541	ncbp3	91	37.520	ENSPLAG00000015399	ncbp3	92	39.560	Poecilia_latipinna
ENSEBUG00000004541	ncbp3	91	37.718	ENSPMEG00000000896	ncbp3	92	39.002	Poecilia_mexicana
ENSEBUG00000004541	ncbp3	91	37.500	ENSPREG00000001681	ncbp3	92	38.498	Poecilia_reticulata
ENSEBUG00000004541	ncbp3	92	35.783	ENSPNYG00000022677	ncbp3	92	36.538	Pundamilia_nyererei
ENSEBUG00000004541	ncbp3	91	34.669	ENSPNAG00000003219	ncbp3	95	37.830	Pygocentrus_nattereri
ENSEBUG00000004541	ncbp3	95	40.464	ENSRNOG00000018550	Ncbp3	93	40.000	Rattus_norvegicus
ENSEBUG00000004541	ncbp3	92	36.236	ENSSFOG00015005808	ncbp3	92	38.331	Scleropages_formosus
ENSEBUG00000004541	ncbp3	95	34.700	ENSSMAG00000010917	ncbp3	92	37.104	Scophthalmus_maximus
ENSEBUG00000004541	ncbp3	96	37.721	ENSSDUG00000023402	ncbp3	93	37.021	Seriola_dumerili
ENSEBUG00000004541	ncbp3	96	32.182	ENSSLDG00000000742	ncbp3	90	32.701	Seriola_lalandi_dorsalis
ENSEBUG00000004541	ncbp3	52	42.331	ENSSPUG00000002240	NCBP3	99	37.309	Sphenodon_punctatus
ENSEBUG00000004541	ncbp3	51	42.598	ENSTGUG00000005396	NCBP3	99	38.450	Taeniopygia_guttata
ENSEBUG00000004541	ncbp3	92	38.255	ENSTRUG00000003769	ncbp3	92	38.438	Takifugu_rubripes
ENSEBUG00000004541	ncbp3	92	37.540	ENSTNIG00000004776	ncbp3	92	38.611	Tetraodon_nigroviridis
ENSEBUG00000004541	ncbp3	91	38.576	ENSXETG00000012965	ncbp3	99	37.730	Xenopus_tropicalis
ENSEBUG00000004541	ncbp3	92	36.305	ENSXCOG00000018393	ncbp3	92	37.097	Xiphophorus_couchianus