EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004637 (Gene tree)
Gene ID: -
Gene Symbol: vars (1 of many)
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 25509 bases
Position: chrFYBX02010622.1:160215-185723
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000007086	Anticodon_1	PF08264.13	1.9e-31	1	1
ENSEBUP00000007086	tRNA-synt_1	PF00133.22	2.8e-118	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007557	-	2916	-	ENSEBUP00000007086	728 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004637	vars	88	99.465	ENSEBUG00000007086	vars	82	99.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004637	vars	100	61.951	ENSG00000204394	VARS	99	68.098	Homo_sapiens
ENSEBUG00000004637	vars	97	65.162	ENSAPOG00000020691	vars	58	65.162	Acanthochromis_polyacanthus
ENSEBUG00000004637	vars	97	65.162	ENSAPOG00000020921	vars	58	65.162	Acanthochromis_polyacanthus
ENSEBUG00000004637	vars	100	62.500	ENSAMEG00000006417	VARS	57	62.225	Ailuropoda_melanoleuca
ENSEBUG00000004637	vars	100	66.347	ENSACIG00000013752	vars	58	66.347	Amphilophus_citrinellus
ENSEBUG00000004637	vars	100	65.390	ENSAOCG00000002447	vars	59	65.253	Amphiprion_ocellaris
ENSEBUG00000004637	vars	100	65.527	ENSAPEG00000010638	vars	58	65.527	Amphiprion_percula
ENSEBUG00000004637	vars	100	64.883	ENSATEG00000020219	vars	58	64.883	Anabas_testudineus
ENSEBUG00000004637	vars	50	54.821	ENSACAG00000017289	-	100	54.821	Anolis_carolinensis
ENSEBUG00000004637	vars	82	70.134	ENSACAG00000029133	-	52	70.134	Anolis_carolinensis
ENSEBUG00000004637	vars	100	62.088	ENSANAG00000015453	VARS	57	61.813	Aotus_nancymaae
ENSEBUG00000004637	vars	100	65.253	ENSACLG00000025699	vars	55	65.253	Astatotilapia_calliptera
ENSEBUG00000004637	vars	92	68.263	ENSAMXG00000017716	vars	56	68.263	Astyanax_mexicanus
ENSEBUG00000004637	vars	100	62.500	ENSBTAG00000005631	VARS	57	62.225	Bos_taurus
ENSEBUG00000004637	vars	100	61.676	ENSCJAG00000002604	VARS	57	61.401	Callithrix_jacchus
ENSEBUG00000004637	vars	100	62.225	ENSCAFG00000000636	VARS	57	61.951	Canis_familiaris
ENSEBUG00000004637	vars	89	64.506	ENSCAFG00020020790	VARS	52	64.198	Canis_lupus_dingo
ENSEBUG00000004637	vars	100	62.775	ENSCHIG00000011008	VARS	57	62.500	Capra_hircus
ENSEBUG00000004637	vars	100	62.088	ENSTSYG00000001567	VARS	57	61.813	Carlito_syrichta
ENSEBUG00000004637	vars	100	62.500	ENSCAPG00000013736	VARS	65	62.659	Cavia_aperea
ENSEBUG00000004637	vars	100	62.088	ENSCPOG00000000870	VARS	60	61.813	Cavia_porcellus
ENSEBUG00000004637	vars	100	62.088	ENSCCAG00000035656	VARS	100	54.187	Cebus_capucinus
ENSEBUG00000004637	vars	100	62.225	ENSCATG00000022394	VARS	100	52.068	Cercocebus_atys
ENSEBUG00000004637	vars	97	60.408	ENSCLAG00000009470	VARS	59	60.136	Chinchilla_lanigera
ENSEBUG00000004637	vars	100	62.363	ENSCSAG00000008784	VARS	57	62.088	Chlorocebus_sabaeus
ENSEBUG00000004637	vars	100	63.874	ENSCPBG00000007943	VARS	71	63.049	Chrysemys_picta_bellii
ENSEBUG00000004637	vars	100	62.500	ENSCANG00000033570	VARS	57	62.225	Colobus_angolensis_palliatus
ENSEBUG00000004637	vars	100	62.912	ENSCGRG00001005686	Vars	58	61.737	Cricetulus_griseus_chok1gshd
ENSEBUG00000004637	vars	100	60.422	ENSCGRG00000013352	Vars	51	60.158	Cricetulus_griseus_crigri
ENSEBUG00000004637	vars	100	63.462	ENSCSEG00000019652	vars	58	63.462	Cynoglossus_semilaevis
ENSEBUG00000004637	vars	100	64.979	ENSCVAG00000022398	vars	57	64.979	Cyprinodon_variegatus
ENSEBUG00000004637	vars	100	65.021	ENSDARG00000044575	vars	57	65.021	Danio_rerio
ENSEBUG00000004637	vars	100	61.813	ENSDORG00000016433	Vars	65	61.538	Dipodomys_ordii
ENSEBUG00000004637	vars	81	68.506	ENSETEG00000003824	VARS	53	68.506	Echinops_telfairi
ENSEBUG00000004637	vars	100	62.088	ENSEASG00005015673	VARS	57	61.813	Equus_asinus_asinus
ENSEBUG00000004637	vars	100	62.225	ENSECAG00000014620	VARS	57	61.951	Equus_caballus
ENSEBUG00000004637	vars	100	64.658	ENSELUG00000006550	vars	56	64.658	Esox_lucius
ENSEBUG00000004637	vars	100	62.088	ENSFCAG00000004510	VARS	57	61.813	Felis_catus
ENSEBUG00000004637	vars	88	65.758	ENSFDAG00000011401	VARS	57	70.566	Fukomys_damarensis
ENSEBUG00000004637	vars	100	64.110	ENSFHEG00000010672	vars	59	63.874	Fundulus_heteroclitus
ENSEBUG00000004637	vars	100	63.836	ENSGMOG00000014908	vars	59	63.836	Gadus_morhua
ENSEBUG00000004637	vars	100	65.253	ENSGAFG00000021630	vars	57	65.253	Gambusia_affinis
ENSEBUG00000004637	vars	100	64.835	ENSGACG00000009601	vars	60	64.835	Gasterosteus_aculeatus
ENSEBUG00000004637	vars	100	61.813	ENSGGOG00000011364	VARS	57	61.538	Gorilla_gorilla
ENSEBUG00000004637	vars	100	65.253	ENSHBUG00000017151	vars	55	65.253	Haplochromis_burtoni
ENSEBUG00000004637	vars	100	62.500	ENSHGLG00000011646	VARS	57	62.225	Heterocephalus_glaber_female
ENSEBUG00000004637	vars	100	56.042	ENSHGLG00100018062	VARS	61	55.777	Heterocephalus_glaber_male
ENSEBUG00000004637	vars	99	65.199	ENSHCOG00000012198	vars	59	64.649	Hippocampus_comes
ENSEBUG00000004637	vars	100	64.609	ENSIPUG00000005218	vars	59	64.521	Ictalurus_punctatus
ENSEBUG00000004637	vars	100	62.363	ENSSTOG00000013112	VARS	57	62.088	Ictidomys_tridecemlineatus
ENSEBUG00000004637	vars	100	51.923	ENSJJAG00000015343	-	59	51.648	Jaculus_jaculus
ENSEBUG00000004637	vars	100	61.538	ENSJJAG00000019749	-	57	61.264	Jaculus_jaculus
ENSEBUG00000004637	vars	100	65.706	ENSKMAG00000009455	vars	58	65.706	Kryptolebias_marmoratus
ENSEBUG00000004637	vars	100	65.663	ENSLBEG00000010341	vars	59	65.295	Labrus_bergylta
ENSEBUG00000004637	vars	90	64.545	ENSLACG00000015232	VARS	54	64.242	Latimeria_chalumnae
ENSEBUG00000004637	vars	100	66.392	ENSLOCG00000004240	vars	58	66.118	Lepisosteus_oculatus
ENSEBUG00000004637	vars	100	62.775	ENSLAFG00000023090	VARS	57	62.500	Loxodonta_africana
ENSEBUG00000004637	vars	100	62.363	ENSMFAG00000001032	VARS	57	62.088	Macaca_fascicularis
ENSEBUG00000004637	vars	100	62.363	ENSMMUG00000006828	VARS	57	62.088	Macaca_mulatta
ENSEBUG00000004637	vars	100	62.363	ENSMNEG00000042072	VARS	57	62.088	Macaca_nemestrina
ENSEBUG00000004637	vars	100	62.225	ENSMLEG00000039307	VARS	57	61.951	Mandrillus_leucophaeus
ENSEBUG00000004637	vars	100	64.843	ENSMAMG00000003949	vars	59	63.649	Mastacembelus_armatus
ENSEBUG00000004637	vars	100	65.253	ENSMZEG00005018327	vars	59	64.472	Maylandia_zebra
ENSEBUG00000004637	vars	100	62.912	ENSMAUG00000006715	Vars	57	62.637	Mesocricetus_auratus
ENSEBUG00000004637	vars	100	61.676	ENSMICG00000003548	VARS	100	52.956	Microcebus_murinus
ENSEBUG00000004637	vars	100	62.500	ENSMOCG00000015404	Vars	58	62.225	Microtus_ochrogaster
ENSEBUG00000004637	vars	100	64.384	ENSMMOG00000015801	vars	60	64.384	Mola_mola
ENSEBUG00000004637	vars	100	63.599	ENSMODG00000015204	-	57	63.462	Monodelphis_domestica
ENSEBUG00000004637	vars	99	65.981	ENSMALG00000022532	vars	58	65.337	Monopterus_albus
ENSEBUG00000004637	vars	100	62.775	MGP_CAROLIEiJ_G0021491	Vars	57	62.500	Mus_caroli
ENSEBUG00000004637	vars	100	62.637	ENSMUSG00000007029	Vars	57	62.363	Mus_musculus
ENSEBUG00000004637	vars	100	62.637	MGP_PahariEiJ_G0020486	Vars	57	62.363	Mus_pahari
ENSEBUG00000004637	vars	100	62.775	MGP_SPRETEiJ_G0022396	Vars	57	62.500	Mus_spretus
ENSEBUG00000004637	vars	100	62.363	ENSMPUG00000010821	VARS	57	62.088	Mustela_putorius_furo
ENSEBUG00000004637	vars	100	62.088	ENSNGAG00000012151	Vars	57	61.813	Nannospalax_galili
ENSEBUG00000004637	vars	100	65.116	ENSNBRG00000020520	vars	59	64.843	Neolamprologus_brichardi
ENSEBUG00000004637	vars	100	61.813	ENSNLEG00000006351	VARS	100	51.202	Nomascus_leucogenys
ENSEBUG00000004637	vars	100	62.775	ENSMEUG00000011378	VARS	57	62.500	Notamacropus_eugenii
ENSEBUG00000004637	vars	100	62.637	ENSOPRG00000003607	VARS	57	62.363	Ochotona_princeps
ENSEBUG00000004637	vars	100	62.775	ENSODEG00000017681	VARS	57	62.500	Octodon_degus
ENSEBUG00000004637	vars	100	65.527	ENSONIG00000013064	vars	64	65.527	Oreochromis_niloticus
ENSEBUG00000004637	vars	100	62.500	ENSOCUG00000022463	VARS	58	62.225	Oryctolagus_cuniculus
ENSEBUG00000004637	vars	100	65.663	ENSORLG00000013063	vars	57	65.663	Oryzias_latipes
ENSEBUG00000004637	vars	100	65.937	ENSORLG00020003504	vars	57	65.937	Oryzias_latipes_hni
ENSEBUG00000004637	vars	100	65.937	ENSORLG00015009001	vars	57	65.937	Oryzias_latipes_hsok
ENSEBUG00000004637	vars	100	65.479	ENSOMEG00000015016	vars	57	65.479	Oryzias_melastigma
ENSEBUG00000004637	vars	100	61.951	ENSOGAG00000007515	VARS	57	61.676	Otolemur_garnettii
ENSEBUG00000004637	vars	100	62.225	ENSPPAG00000034012	VARS	57	61.951	Pan_paniscus
ENSEBUG00000004637	vars	100	62.225	ENSPPRG00000014855	VARS	57	61.951	Panthera_pardus
ENSEBUG00000004637	vars	86	65.024	ENSPTIG00000010462	VARS	55	64.409	Panthera_tigris_altaica
ENSEBUG00000004637	vars	100	62.225	ENSPTRG00000017985	VARS	57	61.951	Pan_troglodytes
ENSEBUG00000004637	vars	100	62.500	ENSPANG00000014565	VARS	58	62.225	Papio_anubis
ENSEBUG00000004637	vars	100	63.201	ENSPKIG00000016304	vars	60	62.842	Paramormyrops_kingsleyae
ENSEBUG00000004637	vars	100	65.021	ENSPMGG00000023909	vars	59	65.021	Periophthalmus_magnuspinnatus
ENSEBUG00000004637	vars	100	62.912	ENSPEMG00000006639	Vars	57	62.637	Peromyscus_maniculatus_bairdii
ENSEBUG00000004637	vars	100	63.599	ENSPCIG00000018553	VARS	57	63.324	Phascolarctos_cinereus
ENSEBUG00000004637	vars	100	65.205	ENSPFOG00000015690	vars	57	65.205	Poecilia_formosa
ENSEBUG00000004637	vars	100	65.342	ENSPLAG00000009590	vars	59	65.342	Poecilia_latipinna
ENSEBUG00000004637	vars	100	65.205	ENSPMEG00000004708	vars	57	65.205	Poecilia_mexicana
ENSEBUG00000004637	vars	100	65.068	ENSPREG00000013264	vars	60	65.068	Poecilia_reticulata
ENSEBUG00000004637	vars	100	59.753	ENSPPYG00000016460	VARS	57	59.478	Pongo_abelii
ENSEBUG00000004637	vars	100	62.363	ENSPCOG00000010942	VARS	57	62.088	Propithecus_coquereli
ENSEBUG00000004637	vars	100	61.126	ENSPVAG00000012403	VARS	57	60.852	Pteropus_vampyrus
ENSEBUG00000004637	vars	100	65.253	ENSPNYG00000022511	vars	57	65.253	Pundamilia_nyererei
ENSEBUG00000004637	vars	100	66.255	ENSPNAG00000020962	vars	62	65.981	Pygocentrus_nattereri
ENSEBUG00000004637	vars	100	62.637	ENSRNOG00000000867	Vars	57	62.363	Rattus_norvegicus
ENSEBUG00000004637	vars	100	62.225	ENSRBIG00000041669	VARS	100	52.311	Rhinopithecus_bieti
ENSEBUG00000004637	vars	100	62.225	ENSRROG00000045490	VARS	59	60.164	Rhinopithecus_roxellana
ENSEBUG00000004637	vars	100	61.951	ENSSBOG00000035402	VARS	57	61.676	Saimiri_boliviensis_boliviensis
ENSEBUG00000004637	vars	100	63.187	ENSSHAG00000006937	VARS	57	62.912	Sarcophilus_harrisii
ENSEBUG00000004637	vars	100	63.896	ENSSFOG00015014272	vars	61	63.760	Scleropages_formosus
ENSEBUG00000004637	vars	100	63.973	ENSSMAG00000009596	vars	57	63.973	Scophthalmus_maximus
ENSEBUG00000004637	vars	100	65.937	ENSSDUG00000014177	vars	57	65.937	Seriola_dumerili
ENSEBUG00000004637	vars	100	65.800	ENSSLDG00000025316	vars	57	65.800	Seriola_lalandi_dorsalis
ENSEBUG00000004637	vars	100	65.937	ENSSPAG00000017068	vars	57	65.937	Stegastes_partitus
ENSEBUG00000004637	vars	100	63.049	ENSSSCG00000038950	VARS	57	62.637	Sus_scrofa
ENSEBUG00000004637	vars	70	65.840	ENSTRUG00000012307	vars	50	65.720	Takifugu_rubripes
ENSEBUG00000004637	vars	100	65.890	ENSTNIG00000008011	vars	60	65.890	Tetraodon_nigroviridis
ENSEBUG00000004637	vars	100	62.912	ENSTTRG00000014128	VARS	57	62.637	Tursiops_truncatus
ENSEBUG00000004637	vars	100	59.426	ENSUAMG00000010424	VARS	57	58.799	Ursus_americanus
ENSEBUG00000004637	vars	88	68.539	ENSUMAG00000013486	VARS	53	68.539	Ursus_maritimus
ENSEBUG00000004637	vars	100	61.951	ENSVVUG00000021323	VARS	60	61.401	Vulpes_vulpes
ENSEBUG00000004637	vars	100	64.746	ENSXETG00000024076	vars	58	64.472	Xenopus_tropicalis
ENSEBUG00000004637	vars	100	64.843	ENSXCOG00000019172	vars	59	64.843	Xiphophorus_couchianus
ENSEBUG00000004637	vars	100	65.116	ENSXMAG00000010927	vars	57	65.116	Xiphophorus_maculatus