EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004912 (Gene tree)
Gene ID: -
Gene Symbol: srsf7a
Alias: sfrs7|srsf7|zgc:114203
Full Name: serine/arginine-rich splicing factor 7a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 103567 bases
Position: chrFYBX02007741.1:1378508-1482074
Accession: ZDB-GENE-040426-1798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000007528	zf-CCHC	PF00098.23	3.1e-05	1	1
ENSEBUP00000007514	zf-CCHC	PF00098.23	3.3e-05	1	1
ENSEBUP00000007528	RRM_1	PF00076.22	1.9e-16	1	1
ENSEBUP00000007514	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000007998	-	2753	-	ENSEBUP00000007514	244 (aa)	-	-
ENSEBUT00000008014	-	2717	-	ENSEBUP00000007528	232 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004912	srsf7a	52	48.062	ENSEBUG00000011974	-	71	48.739
ENSEBUG00000004912	srsf7a	63	50.658	ENSEBUG00000002677	-	51	62.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004912	srsf7a	51	76.471	ENSG00000115875	SRSF7	90	76.471	Homo_sapiens
ENSEBUG00000004912	srsf7a	50	76.522	ENSAMEG00000015988	SRSF7	55	62.162	Ailuropoda_melanoleuca
ENSEBUG00000004912	srsf7a	67	63.462	ENSACIG00000004885	srsf7a	73	78.070	Amphilophus_citrinellus
ENSEBUG00000004912	srsf7a	51	73.950	ENSACIG00000009890	srsf7b	92	73.950	Amphilophus_citrinellus
ENSEBUG00000004912	srsf7a	53	53.968	ENSAOCG00000021499	srsf7b	80	55.263	Amphiprion_ocellaris
ENSEBUG00000004912	srsf7a	53	53.968	ENSAPEG00000018802	srsf7b	80	55.263	Amphiprion_percula
ENSEBUG00000004912	srsf7a	51	75.630	ENSACAG00000006082	SRSF7	51	75.630	Anolis_carolinensis
ENSEBUG00000004912	srsf7a	51	76.471	ENSANAG00000019399	SRSF7	87	76.471	Aotus_nancymaae
ENSEBUG00000004912	srsf7a	51	75.630	ENSAMXG00000007005	srsf7b	56	75.630	Astyanax_mexicanus
ENSEBUG00000004912	srsf7a	51	76.471	ENSBTAG00000014891	SRSF7	87	76.471	Bos_taurus
ENSEBUG00000004912	srsf7a	51	76.471	ENSCJAG00000015185	SRSF7	87	76.471	Callithrix_jacchus
ENSEBUG00000004912	srsf7a	51	76.471	ENSCAFG00000029620	SRSF7	65	62.338	Canis_familiaris
ENSEBUG00000004912	srsf7a	51	76.471	ENSCAFG00020022807	SRSF7	87	76.471	Canis_lupus_dingo
ENSEBUG00000004912	srsf7a	51	55.833	ENSCAFG00020013547	-	68	59.091	Canis_lupus_dingo
ENSEBUG00000004912	srsf7a	51	76.471	ENSCHIG00000019180	SRSF7	87	76.471	Capra_hircus
ENSEBUG00000004912	srsf7a	51	76.471	ENSTSYG00000012273	SRSF7	87	76.471	Carlito_syrichta
ENSEBUG00000004912	srsf7a	51	76.471	ENSCPOG00000033318	SRSF7	87	76.471	Cavia_porcellus
ENSEBUG00000004912	srsf7a	51	76.471	ENSCATG00000031728	SRSF7	87	76.471	Cercocebus_atys
ENSEBUG00000004912	srsf7a	51	76.471	ENSCLAG00000005235	SRSF7	87	76.471	Chinchilla_lanigera
ENSEBUG00000004912	srsf7a	65	50.943	ENSCSAG00000010291	SRSF3	57	68.085	Chlorocebus_sabaeus
ENSEBUG00000004912	srsf7a	51	73.109	ENSCPBG00000018252	-	87	73.109	Chrysemys_picta_bellii
ENSEBUG00000004912	srsf7a	51	75.630	ENSCPBG00000018247	-	87	75.630	Chrysemys_picta_bellii
ENSEBUG00000004912	srsf7a	66	45.930	ENSCSAVG00000007369	-	70	53.125	Ciona_savignyi
ENSEBUG00000004912	srsf7a	51	76.471	ENSCANG00000040757	SRSF7	87	76.471	Colobus_angolensis_palliatus
ENSEBUG00000004912	srsf7a	69	44.099	ENSCGRG00001022756	-	52	61.538	Cricetulus_griseus_chok1gshd
ENSEBUG00000004912	srsf7a	51	76.471	ENSCGRG00001018245	Srsf7	50	76.471	Cricetulus_griseus_chok1gshd
ENSEBUG00000004912	srsf7a	69	44.099	ENSCGRG00000017619	-	52	61.538	Cricetulus_griseus_crigri
ENSEBUG00000004912	srsf7a	62	50.980	ENSCSEG00000002271	srsf3b	73	65.979	Cynoglossus_semilaevis
ENSEBUG00000004912	srsf7a	68	60.795	ENSDARG00000035325	srsf7a	89	76.923	Danio_rerio
ENSEBUG00000004912	srsf7a	51	75.630	ENSDARG00000101057	srsf7b	78	75.630	Danio_rerio
ENSEBUG00000004912	srsf7a	51	76.471	ENSDNOG00000007821	SRSF7	87	76.471	Dasypus_novemcinctus
ENSEBUG00000004912	srsf7a	51	76.471	ENSDORG00000008616	Srsf7	65	62.338	Dipodomys_ordii
ENSEBUG00000004912	srsf7a	72	46.524	FBgn0028554	x16	67	39.888	Drosophila_melanogaster
ENSEBUG00000004912	srsf7a	51	76.471	ENSEASG00005005547	SRSF7	87	76.471	Equus_asinus_asinus
ENSEBUG00000004912	srsf7a	51	76.471	ENSECAG00000008664	SRSF7	65	62.338	Equus_caballus
ENSEBUG00000004912	srsf7a	51	76.471	ENSEEUG00000014487	SRSF7	50	76.471	Erinaceus_europaeus
ENSEBUG00000004912	srsf7a	53	69.672	ENSELUG00000016922	srsf7a	76	76.636	Esox_lucius
ENSEBUG00000004912	srsf7a	62	49.673	ENSELUG00000002390	srsf3a	54	48.092	Esox_lucius
ENSEBUG00000004912	srsf7a	51	74.576	ENSELUG00000018155	srsf7b	86	74.576	Esox_lucius
ENSEBUG00000004912	srsf7a	51	76.471	ENSFCAG00000031143	SRSF7	55	76.471	Felis_catus
ENSEBUG00000004912	srsf7a	50	46.154	ENSFCAG00000028644	-	77	46.552	Felis_catus
ENSEBUG00000004912	srsf7a	51	76.471	ENSFDAG00000016030	-	87	76.471	Fukomys_damarensis
ENSEBUG00000004912	srsf7a	53	74.590	ENSFHEG00000007159	srsf7a	61	78.947	Fundulus_heteroclitus
ENSEBUG00000004912	srsf7a	51	73.950	ENSFHEG00000023046	srsf7b	52	73.950	Fundulus_heteroclitus
ENSEBUG00000004912	srsf7a	54	65.942	ENSGMOG00000002004	srsf7a	62	67.123	Gadus_morhua
ENSEBUG00000004912	srsf7a	51	75.424	ENSGALG00000033120	SRSF7	87	75.424	Gallus_gallus
ENSEBUG00000004912	srsf7a	52	73.554	ENSGAFG00000008856	srsf7b	78	77.064	Gambusia_affinis
ENSEBUG00000004912	srsf7a	52	47.244	ENSGAFG00000010130	-	75	67.021	Gambusia_affinis
ENSEBUG00000004912	srsf7a	51	73.109	ENSGAGG00000003553	SRSF7	87	73.109	Gopherus_agassizii
ENSEBUG00000004912	srsf7a	51	74.790	ENSGAGG00000016294	-	87	74.790	Gopherus_agassizii
ENSEBUG00000004912	srsf7a	51	76.471	ENSGGOG00000014620	SRSF7	87	76.471	Gorilla_gorilla
ENSEBUG00000004912	srsf7a	51	57.258	ENSHGLG00000005295	-	87	57.258	Heterocephalus_glaber_female
ENSEBUG00000004912	srsf7a	51	76.471	ENSHGLG00000013954	-	65	62.338	Heterocephalus_glaber_female
ENSEBUG00000004912	srsf7a	51	76.471	ENSHGLG00100006124	-	87	76.471	Heterocephalus_glaber_male
ENSEBUG00000004912	srsf7a	51	57.258	ENSHGLG00100014570	-	87	57.258	Heterocephalus_glaber_male
ENSEBUG00000004912	srsf7a	51	73.950	ENSIPUG00000011708	srsf7	68	73.950	Ictalurus_punctatus
ENSEBUG00000004912	srsf7a	51	76.471	ENSSTOG00000004389	SRSF7	87	76.471	Ictidomys_tridecemlineatus
ENSEBUG00000004912	srsf7a	72	42.012	ENSSTOG00000032014	-	63	60.638	Ictidomys_tridecemlineatus
ENSEBUG00000004912	srsf7a	53	59.200	ENSJJAG00000020230	-	67	59.821	Jaculus_jaculus
ENSEBUG00000004912	srsf7a	51	76.471	ENSJJAG00000023079	Srsf7	65	62.338	Jaculus_jaculus
ENSEBUG00000004912	srsf7a	52	48.031	ENSKMAG00000007829	-	88	50.000	Kryptolebias_marmoratus
ENSEBUG00000004912	srsf7a	62	50.331	ENSLACG00000008131	SRSF3	68	52.713	Latimeria_chalumnae
ENSEBUG00000004912	srsf7a	51	75.630	ENSLOCG00000015778	srsf7b	50	75.630	Lepisosteus_oculatus
ENSEBUG00000004912	srsf7a	51	76.471	ENSLAFG00000005666	SRSF7	74	76.471	Loxodonta_africana
ENSEBUG00000004912	srsf7a	51	76.471	ENSMFAG00000001980	SRSF7	87	76.471	Macaca_fascicularis
ENSEBUG00000004912	srsf7a	51	76.471	ENSMMUG00000011025	SRSF7	69	80.000	Macaca_mulatta
ENSEBUG00000004912	srsf7a	51	76.471	ENSMNEG00000036669	SRSF7	69	80.000	Macaca_nemestrina
ENSEBUG00000004912	srsf7a	51	76.471	ENSMLEG00000038852	SRSF7	87	76.471	Mandrillus_leucophaeus
ENSEBUG00000004912	srsf7a	66	62.577	ENSMAMG00000017138	srsf7b	52	73.109	Mastacembelus_armatus
ENSEBUG00000004912	srsf7a	50	62.069	ENSMAUG00000021932	-	55	63.636	Mesocricetus_auratus
ENSEBUG00000004912	srsf7a	51	76.471	ENSMAUG00000017430	Srsf7	50	76.471	Mesocricetus_auratus
ENSEBUG00000004912	srsf7a	75	44.571	ENSMAUG00000011430	-	68	52.941	Mesocricetus_auratus
ENSEBUG00000004912	srsf7a	50	76.271	ENSMICG00000005046	SRSF7	69	80.000	Microcebus_murinus
ENSEBUG00000004912	srsf7a	51	73.109	ENSMOCG00000022763	-	51	73.109	Microtus_ochrogaster
ENSEBUG00000004912	srsf7a	69	62.893	ENSMMOG00000005208	srsf7a	89	65.333	Mola_mola
ENSEBUG00000004912	srsf7a	65	50.331	ENSMMOG00000021774	srsf3b	75	51.370	Mola_mola
ENSEBUG00000004912	srsf7a	51	75.630	ENSMODG00000008669	-	50	75.630	Monodelphis_domestica
ENSEBUG00000004912	srsf7a	51	76.471	MGP_CAROLIEiJ_G0021902	Srsf7	50	76.471	Mus_caroli
ENSEBUG00000004912	srsf7a	51	76.471	ENSMUSG00000024097	Srsf7	87	76.471	Mus_musculus
ENSEBUG00000004912	srsf7a	51	75.630	MGP_PahariEiJ_G0020891	Srsf7	50	75.630	Mus_pahari
ENSEBUG00000004912	srsf7a	51	76.471	MGP_SPRETEiJ_G0022817	Srsf7	50	76.471	Mus_spretus
ENSEBUG00000004912	srsf7a	69	48.428	ENSMLUG00000030735	-	53	66.279	Myotis_lucifugus
ENSEBUG00000004912	srsf7a	51	75.630	ENSMLUG00000009536	SRSF7	50	75.630	Myotis_lucifugus
ENSEBUG00000004912	srsf7a	51	69.748	ENSMLUG00000015692	-	53	69.748	Myotis_lucifugus
ENSEBUG00000004912	srsf7a	51	76.471	ENSNGAG00000014431	Srsf7	65	62.338	Nannospalax_galili
ENSEBUG00000004912	srsf7a	76	58.378	ENSNBRG00000006601	srsf7a	73	78.070	Neolamprologus_brichardi
ENSEBUG00000004912	srsf7a	51	76.471	ENSNLEG00000016349	SRSF7	87	76.471	Nomascus_leucogenys
ENSEBUG00000004912	srsf7a	51	75.630	ENSMEUG00000016459	-	50	75.630	Notamacropus_eugenii
ENSEBUG00000004912	srsf7a	71	57.609	ENSMEUG00000000773	-	82	63.057	Notamacropus_eugenii
ENSEBUG00000004912	srsf7a	51	76.471	ENSOPRG00000010234	SRSF7	52	76.471	Ochotona_princeps
ENSEBUG00000004912	srsf7a	51	76.471	ENSODEG00000010029	-	65	62.338	Octodon_degus
ENSEBUG00000004912	srsf7a	51	76.471	ENSOCUG00000004087	SRSF7	65	62.338	Oryctolagus_cuniculus
ENSEBUG00000004912	srsf7a	52	47.244	ENSORLG00015007526	-	59	67.021	Oryzias_latipes_hsok
ENSEBUG00000004912	srsf7a	52	47.244	ENSOMEG00000006746	-	56	67.021	Oryzias_melastigma
ENSEBUG00000004912	srsf7a	51	76.471	ENSOGAG00000010169	SRSF7	64	60.897	Otolemur_garnettii
ENSEBUG00000004912	srsf7a	53	74.400	ENSOARG00000008771	SRSF7	65	61.146	Ovis_aries
ENSEBUG00000004912	srsf7a	51	76.471	ENSPPAG00000017907	SRSF7	69	80.000	Pan_paniscus
ENSEBUG00000004912	srsf7a	51	76.471	ENSPPRG00000003682	SRSF7	55	76.471	Panthera_pardus
ENSEBUG00000004912	srsf7a	51	76.471	ENSPTIG00000006350	SRSF7	55	76.471	Panthera_tigris_altaica
ENSEBUG00000004912	srsf7a	59	70.139	ENSPTRG00000011851	SRSF7	69	80.000	Pan_troglodytes
ENSEBUG00000004912	srsf7a	51	76.471	ENSPANG00000018079	SRSF7	69	80.000	Papio_anubis
ENSEBUG00000004912	srsf7a	69	63.354	ENSPKIG00000017425	srsf7b	68	74.790	Paramormyrops_kingsleyae
ENSEBUG00000004912	srsf7a	51	73.950	ENSPKIG00000022669	SRSF7	80	73.950	Paramormyrops_kingsleyae
ENSEBUG00000004912	srsf7a	51	76.471	ENSPEMG00000015449	Srsf7	50	76.471	Peromyscus_maniculatus_bairdii
ENSEBUG00000004912	srsf7a	53	69.355	ENSPMAG00000004472	srsf7a	53	77.143	Petromyzon_marinus
ENSEBUG00000004912	srsf7a	51	71.429	ENSPCIG00000020726	-	88	71.429	Phascolarctos_cinereus
ENSEBUG00000004912	srsf7a	51	75.630	ENSPCIG00000020694	-	87	75.630	Phascolarctos_cinereus
ENSEBUG00000004912	srsf7a	51	74.790	ENSPFOG00000008820	srsf7b	52	74.790	Poecilia_formosa
ENSEBUG00000004912	srsf7a	51	74.790	ENSPLAG00000023806	srsf7b	52	74.790	Poecilia_latipinna
ENSEBUG00000004912	srsf7a	51	74.790	ENSPREG00000006149	srsf7b	54	74.790	Poecilia_reticulata
ENSEBUG00000004912	srsf7a	51	76.471	ENSPPYG00000012480	SRSF7	50	76.471	Pongo_abelii
ENSEBUG00000004912	srsf7a	51	76.471	ENSPCAG00000011348	SRSF7	52	76.471	Procavia_capensis
ENSEBUG00000004912	srsf7a	51	69.748	ENSPCOG00000023721	-	75	69.748	Propithecus_coquereli
ENSEBUG00000004912	srsf7a	51	76.471	ENSPCOG00000019422	-	52	78.571	Propithecus_coquereli
ENSEBUG00000004912	srsf7a	50	76.271	ENSPVAG00000012076	SRSF7	52	75.630	Pteropus_vampyrus
ENSEBUG00000004912	srsf7a	51	75.630	ENSPNAG00000012546	srsf7b	50	75.630	Pygocentrus_nattereri
ENSEBUG00000004912	srsf7a	51	76.471	ENSRNOG00000027360	Srsf7	50	76.471	Rattus_norvegicus
ENSEBUG00000004912	srsf7a	51	76.471	ENSRROG00000005080	SRSF7	87	76.471	Rhinopithecus_roxellana
ENSEBUG00000004912	srsf7a	51	76.471	ENSSBOG00000025074	SRSF7	87	76.471	Saimiri_boliviensis_boliviensis
ENSEBUG00000004912	srsf7a	50	75.652	ENSSHAG00000015970	-	80	77.477	Sarcophilus_harrisii
ENSEBUG00000004912	srsf7a	51	74.790	ENSSFOG00015007348	SRSF7	50	74.790	Scleropages_formosus
ENSEBUG00000004912	srsf7a	57	70.677	ENSSDUG00000021338	srsf7b	83	73.109	Seriola_dumerili
ENSEBUG00000004912	srsf7a	51	72.269	ENSSLDG00000021463	srsf7b	67	72.269	Seriola_lalandi_dorsalis
ENSEBUG00000004912	srsf7a	51	75.630	ENSSPAG00000017204	srsf7b	84	75.630	Stegastes_partitus
ENSEBUG00000004912	srsf7a	50	75.862	ENSSPAG00000022192	srsf7a	90	77.193	Stegastes_partitus
ENSEBUG00000004912	srsf7a	51	76.471	ENSSSCG00000008484	SRSF7	87	76.471	Sus_scrofa
ENSEBUG00000004912	srsf7a	51	74.790	ENSTGUG00000002080	-	50	74.790	Taeniopygia_guttata
ENSEBUG00000004912	srsf7a	62	47.682	ENSTRUG00000023965	-	75	67.021	Takifugu_rubripes
ENSEBUG00000004912	srsf7a	51	76.471	ENSUAMG00000025051	-	87	76.471	Ursus_americanus
ENSEBUG00000004912	srsf7a	51	76.471	ENSUMAG00000013534	SRSF7	65	62.338	Ursus_maritimus
ENSEBUG00000004912	srsf7a	59	53.237	ENSVVUG00000006092	-	67	60.000	Vulpes_vulpes
ENSEBUG00000004912	srsf7a	51	76.471	ENSVVUG00000018767	-	87	76.471	Vulpes_vulpes
ENSEBUG00000004912	srsf7a	51	75.000	ENSXETG00000025300	srsf7	51	75.630	Xenopus_tropicalis
ENSEBUG00000004912	srsf7a	54	73.810	ENSXCOG00000009381	srsf7a	88	78.070	Xiphophorus_couchianus
ENSEBUG00000004912	srsf7a	54	72.222	ENSXCOG00000010843	srsf7b	81	74.790	Xiphophorus_couchianus