EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000004971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 65633 bases
Position: chrFYBX02010310.1:3424446-3490078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000007610	MMR_HSR1	PF01926.23	9.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008097	-	654	-	ENSEBUP00000007610	217 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000004971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000004971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000004971	-	75	34.146	ENSEBUG00000002306	rheb	86	34.146
ENSEBUG00000004971	-	79	43.860	ENSEBUG00000011775	rab11ba	78	44.242
ENSEBUG00000004971	-	95	38.462	ENSEBUG00000007493	rab11a	80	42.857
ENSEBUG00000004971	-	88	36.735	ENSEBUG00000004967	rab9b	94	36.735
ENSEBUG00000004971	-	76	32.121	ENSEBUG00000011510	-	80	32.121
ENSEBUG00000004971	-	76	37.349	ENSEBUG00000014794	rab5c	77	37.349
ENSEBUG00000004971	-	71	30.625	ENSEBUG00000014186	-	76	31.395
ENSEBUG00000004971	-	75	36.810	ENSEBUG00000012680	-	67	36.810
ENSEBUG00000004971	-	77	33.333	ENSEBUG00000010861	-	66	33.333
ENSEBUG00000004971	-	75	37.195	ENSEBUG00000015845	-	73	37.195
ENSEBUG00000004971	-	71	33.758	ENSEBUG00000008934	rab36	59	33.758
ENSEBUG00000004971	-	79	35.260	ENSEBUG00000003784	rhebl1	93	34.416
ENSEBUG00000004971	-	76	42.424	ENSEBUG00000006581	rab12	80	42.424
ENSEBUG00000004971	-	95	38.164	ENSEBUG00000015447	-	94	38.164
ENSEBUG00000004971	-	90	39.487	ENSEBUG00000015886	-	94	39.487
ENSEBUG00000004971	-	79	36.047	ENSEBUG00000000963	-	89	36.646
ENSEBUG00000004971	-	75	34.356	ENSEBUG00000003339	-	77	33.742
ENSEBUG00000004971	-	76	33.728	ENSEBUG00000002259	RAB29	81	33.728
ENSEBUG00000004971	-	94	37.619	ENSEBUG00000009003	-	88	37.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000004971	-	89	48.731	WBGene00004286	rab-39	86	48.731	Caenorhabditis_elegans
ENSEBUG00000004971	-	98	50.000	ENSCSAVG00000008684	-	99	50.000	Ciona_savignyi
ENSEBUG00000004971	-	89	52.551	FBgn0029959	Rab39	90	52.551	Drosophila_melanogaster