EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 75147 bases
Position: chrFYBX02009871.1:5754746-5829892
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000007674	RRM_1	PF00076.22	1.9e-10	1	1
ENSEBUP00000007665	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008162	-	1362	-	ENSEBUP00000007674	197 (aa)	-	-
ENSEBUT00000008154	-	704	-	ENSEBUP00000007665	193 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005004	-	94	50.000	ENSEBUG00000012768	RBPMS2	94	50.000
ENSEBUG00000005004	-	91	49.223	ENSEBUG00000000297	RBPMS2	92	51.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005004	-	74	57.143	ENSG00000166831	RBPMS2	87	49.733	Homo_sapiens
ENSEBUG00000005004	-	98	49.275	ENSAPOG00000007842	rbpms2b	98	51.500	Acanthochromis_polyacanthus
ENSEBUG00000005004	-	74	57.823	ENSAMEG00000002664	RBPMS2	87	51.323	Ailuropoda_melanoleuca
ENSEBUG00000005004	-	98	48.309	ENSACIG00000013696	rbpms2b	73	50.500	Amphilophus_citrinellus
ENSEBUG00000005004	-	98	48.792	ENSAOCG00000000105	rbpms2b	72	51.000	Amphiprion_ocellaris
ENSEBUG00000005004	-	98	48.792	ENSAPEG00000001705	rbpms2b	98	51.000	Amphiprion_percula
ENSEBUG00000005004	-	98	49.275	ENSATEG00000020326	rbpms2b	73	51.500	Anabas_testudineus
ENSEBUG00000005004	-	73	59.028	ENSAPLG00000004799	RBPMS2	88	52.174	Anas_platyrhynchos
ENSEBUG00000005004	-	72	59.441	ENSACAG00000012227	RBPMS2	97	55.975	Anolis_carolinensis
ENSEBUG00000005004	-	74	57.143	ENSANAG00000014652	RBPMS2	82	52.907	Aotus_nancymaae
ENSEBUG00000005004	-	98	49.275	ENSACLG00000012769	rbpms2b	73	51.500	Astatotilapia_calliptera
ENSEBUG00000005004	-	81	56.522	ENSAMXG00000036507	rbpms2a	99	49.268	Astyanax_mexicanus
ENSEBUG00000005004	-	98	48.792	ENSAMXG00000037525	rbpms2b	99	52.941	Astyanax_mexicanus
ENSEBUG00000005004	-	74	57.143	ENSBTAG00000011037	RBPMS2	80	52.907	Bos_taurus
ENSEBUG00000005004	-	59	53.509	ENSBTAG00000049268	-	61	54.386	Bos_taurus
ENSEBUG00000005004	-	74	56.463	ENSCJAG00000005200	RBPMS2	81	52.326	Callithrix_jacchus
ENSEBUG00000005004	-	74	57.823	ENSCAFG00000017098	RBPMS2	86	50.794	Canis_familiaris
ENSEBUG00000005004	-	77	55.921	ENSCAFG00020008908	RBPMS2	86	50.794	Canis_lupus_dingo
ENSEBUG00000005004	-	73	57.639	ENSCHIG00000024439	RBPMS2	87	52.273	Capra_hircus
ENSEBUG00000005004	-	73	57.639	ENSTSYG00000008996	-	77	53.801	Carlito_syrichta
ENSEBUG00000005004	-	72	49.650	ENSTSYG00000033527	-	80	45.455	Carlito_syrichta
ENSEBUG00000005004	-	89	52.198	ENSCAPG00000015689	RBPMS2	99	52.198	Cavia_aperea
ENSEBUG00000005004	-	89	52.198	ENSCPOG00000007695	RBPMS2	99	52.198	Cavia_porcellus
ENSEBUG00000005004	-	74	57.143	ENSCCAG00000036496	RBPMS2	81	52.907	Cebus_capucinus
ENSEBUG00000005004	-	74	57.143	ENSCATG00000042116	RBPMS2	81	52.907	Cercocebus_atys
ENSEBUG00000005004	-	90	50.820	ENSCLAG00000016082	RBPMS2	99	52.174	Chinchilla_lanigera
ENSEBUG00000005004	-	73	57.931	ENSCSAG00000012562	RBPMS2	83	50.270	Chlorocebus_sabaeus
ENSEBUG00000005004	-	80	56.250	ENSCPBG00000006048	RBPMS2	96	53.409	Chrysemys_picta_bellii
ENSEBUG00000005004	-	74	56.463	ENSCGRG00001014627	Rbpms2	88	50.265	Cricetulus_griseus_chok1gshd
ENSEBUG00000005004	-	73	56.944	ENSCGRG00000005899	Rbpms2	99	51.630	Cricetulus_griseus_crigri
ENSEBUG00000005004	-	98	49.275	ENSCVAG00000004878	rbpms2b	75	51.500	Cyprinodon_variegatus
ENSEBUG00000005004	-	98	50.990	ENSDARG00000079578	rbpms2b	96	66.667	Danio_rerio
ENSEBUG00000005004	-	98	49.275	ENSDARG00000045930	rbpms2a	98	51.500	Danio_rerio
ENSEBUG00000005004	-	81	53.750	ENSDNOG00000048895	RBPMS2	96	49.000	Dasypus_novemcinctus
ENSEBUG00000005004	-	89	52.222	ENSDORG00000004025	-	96	52.222	Dipodomys_ordii
ENSEBUG00000005004	-	91	45.304	ENSDORG00000023373	-	95	45.109	Dipodomys_ordii
ENSEBUG00000005004	-	73	56.944	ENSETEG00000010176	RBPMS2	90	52.000	Echinops_telfairi
ENSEBUG00000005004	-	74	57.823	ENSEASG00005006523	RBPMS2	86	50.794	Equus_asinus_asinus
ENSEBUG00000005004	-	73	58.333	ENSECAG00000015345	RBPMS2	84	51.075	Equus_caballus
ENSEBUG00000005004	-	98	51.741	ENSELUG00000023770	RBPMS	99	51.500	Esox_lucius
ENSEBUG00000005004	-	99	50.739	ENSELUG00000021784	rbpms2b	82	62.791	Esox_lucius
ENSEBUG00000005004	-	74	57.823	ENSFCAG00000032451	RBPMS2	87	50.794	Felis_catus
ENSEBUG00000005004	-	73	57.931	ENSFALG00000009836	RBPMS2	91	51.630	Ficedula_albicollis
ENSEBUG00000005004	-	73	58.333	ENSFDAG00000016154	RBPMS2	99	53.297	Fukomys_damarensis
ENSEBUG00000005004	-	98	49.275	ENSFHEG00000014766	rbpms2b	75	51.500	Fundulus_heteroclitus
ENSEBUG00000005004	-	89	52.717	ENSGMOG00000008502	rbpms2b	99	52.459	Gadus_morhua
ENSEBUG00000005004	-	82	54.601	ENSGALG00000030988	RBPMS2	99	49.505	Gallus_gallus
ENSEBUG00000005004	-	76	43.293	ENSGAFG00000002978	rbpms2b	82	45.860	Gambusia_affinis
ENSEBUG00000005004	-	89	49.474	ENSGACG00000017472	rbpms2b	99	51.913	Gasterosteus_aculeatus
ENSEBUG00000005004	-	80	56.250	ENSGAGG00000020044	RBPMS2	96	53.409	Gopherus_agassizii
ENSEBUG00000005004	-	73	57.639	ENSGGOG00000008984	RBPMS2	99	51.099	Gorilla_gorilla
ENSEBUG00000005004	-	98	49.275	ENSHBUG00000009135	rbpms2b	73	51.500	Haplochromis_burtoni
ENSEBUG00000005004	-	83	53.846	ENSHGLG00000008504	RBPMS2	99	50.242	Heterocephalus_glaber_female
ENSEBUG00000005004	-	73	57.639	ENSHGLG00100019122	RBPMS2	99	52.747	Heterocephalus_glaber_male
ENSEBUG00000005004	-	96	49.020	ENSHCOG00000018429	rbpms2b	98	51.269	Hippocampus_comes
ENSEBUG00000005004	-	90	52.973	ENSIPUG00000020981	RBPMS	98	53.039	Ictalurus_punctatus
ENSEBUG00000005004	-	98	48.309	ENSIPUG00000014032	RBPMS	98	50.500	Ictalurus_punctatus
ENSEBUG00000005004	-	74	58.503	ENSSTOG00000010055	RBPMS2	89	51.323	Ictidomys_tridecemlineatus
ENSEBUG00000005004	-	73	57.639	ENSJJAG00000001664	Rbpms2	90	50.543	Jaculus_jaculus
ENSEBUG00000005004	-	98	49.275	ENSKMAG00000002005	rbpms2b	68	51.500	Kryptolebias_marmoratus
ENSEBUG00000005004	-	69	59.420	ENSLBEG00000017287	rbpms2b	70	55.844	Labrus_bergylta
ENSEBUG00000005004	-	92	47.959	ENSLACG00000016999	RBPMS2	91	51.087	Latimeria_chalumnae
ENSEBUG00000005004	-	99	48.804	ENSLOCG00000015018	rbpms2b	99	50.495	Lepisosteus_oculatus
ENSEBUG00000005004	-	73	57.931	ENSLAFG00000018725	RBPMS2	99	52.459	Loxodonta_africana
ENSEBUG00000005004	-	74	56.463	ENSMFAG00000045343	RBPMS2	87	49.198	Macaca_fascicularis
ENSEBUG00000005004	-	74	56.463	ENSMMUG00000013270	RBPMS2	87	49.198	Macaca_mulatta
ENSEBUG00000005004	-	74	56.463	ENSMNEG00000019330	RBPMS2	87	49.198	Macaca_nemestrina
ENSEBUG00000005004	-	73	57.639	ENSMLEG00000035922	RBPMS2	99	51.099	Mandrillus_leucophaeus
ENSEBUG00000005004	-	98	48.309	ENSMAMG00000014149	rbpms2b	97	52.151	Mastacembelus_armatus
ENSEBUG00000005004	-	98	49.275	ENSMZEG00005013727	rbpms2b	98	51.500	Maylandia_zebra
ENSEBUG00000005004	-	75	57.432	ENSMGAG00000001128	RBPMS2	92	51.337	Meleagris_gallopavo
ENSEBUG00000005004	-	74	57.143	ENSMAUG00000019407	Rbpms2	95	51.099	Mesocricetus_auratus
ENSEBUG00000005004	-	74	57.143	ENSMICG00000029953	RBPMS2	87	49.733	Microcebus_murinus
ENSEBUG00000005004	-	81	54.658	ENSMOCG00000021603	Rbpms2	97	48.744	Microtus_ochrogaster
ENSEBUG00000005004	-	93	48.223	ENSMMOG00000002240	rbpms2b	91	50.526	Mola_mola
ENSEBUG00000005004	-	74	58.219	ENSMODG00000010487	RBPMS2	87	51.596	Monodelphis_domestica
ENSEBUG00000005004	-	98	49.746	ENSMALG00000014621	rbpms2b	72	49.746	Monopterus_albus
ENSEBUG00000005004	-	100	46.009	MGP_CAROLIEiJ_G0032367	Rbpms2	99	45.755	Mus_caroli
ENSEBUG00000005004	-	100	46.009	ENSMUSG00000032387	Rbpms2	99	45.755	Mus_musculus
ENSEBUG00000005004	-	74	57.143	MGP_PahariEiJ_G0015232	Rbpms2	88	51.337	Mus_pahari
ENSEBUG00000005004	-	100	46.009	MGP_SPRETEiJ_G0033506	Rbpms2	99	45.755	Mus_spretus
ENSEBUG00000005004	-	73	57.931	ENSMPUG00000000553	RBPMS2	89	51.648	Mustela_putorius_furo
ENSEBUG00000005004	-	73	58.333	ENSMLUG00000013394	RBPMS2	77	54.658	Myotis_lucifugus
ENSEBUG00000005004	-	74	57.143	ENSNGAG00000023569	Rbpms2	83	52.299	Nannospalax_galili
ENSEBUG00000005004	-	98	49.275	ENSNBRG00000019943	rbpms2b	73	51.500	Neolamprologus_brichardi
ENSEBUG00000005004	-	73	56.944	ENSOPRG00000013668	RBPMS2	97	54.037	Ochotona_princeps
ENSEBUG00000005004	-	73	56.944	ENSODEG00000016172	RBPMS2	95	51.087	Octodon_degus
ENSEBUG00000005004	-	98	49.275	ENSONIG00000005770	rbpms2b	98	51.500	Oreochromis_niloticus
ENSEBUG00000005004	-	64	60.465	ENSOANG00000011802	-	88	60.465	Ornithorhynchus_anatinus
ENSEBUG00000005004	-	74	57.143	ENSOCUG00000010388	RBPMS2	88	51.579	Oryctolagus_cuniculus
ENSEBUG00000005004	-	98	49.758	ENSORLG00000027223	rbpms2b	74	52.000	Oryzias_latipes
ENSEBUG00000005004	-	98	49.758	ENSORLG00020001166	rbpms2b	74	52.000	Oryzias_latipes_hni
ENSEBUG00000005004	-	98	49.758	ENSORLG00015001749	rbpms2b	74	52.000	Oryzias_latipes_hsok
ENSEBUG00000005004	-	98	49.758	ENSOMEG00000006495	rbpms2b	98	47.500	Oryzias_melastigma
ENSEBUG00000005004	-	73	56.552	ENSOGAG00000026017	RBPMS2	83	52.353	Otolemur_garnettii
ENSEBUG00000005004	-	74	57.143	ENSOARG00000020727	RBPMS2	83	51.955	Ovis_aries
ENSEBUG00000005004	-	73	57.639	ENSPPAG00000024456	RBPMS2	99	51.099	Pan_paniscus
ENSEBUG00000005004	-	74	57.823	ENSPPRG00000014944	RBPMS2	87	50.794	Panthera_pardus
ENSEBUG00000005004	-	73	58.333	ENSPTIG00000017879	RBPMS2	85	52.174	Panthera_tigris_altaica
ENSEBUG00000005004	-	74	57.143	ENSPTRG00000007165	RBPMS2	87	49.733	Pan_troglodytes
ENSEBUG00000005004	-	74	57.143	ENSPANG00000016754	RBPMS2	81	52.907	Papio_anubis
ENSEBUG00000005004	-	98	49.746	ENSPKIG00000012634	rbpms2b	98	49.746	Paramormyrops_kingsleyae
ENSEBUG00000005004	-	81	57.143	ENSPKIG00000022509	rbpms2a	98	50.500	Paramormyrops_kingsleyae
ENSEBUG00000005004	-	72	58.741	ENSPSIG00000013115	RBPMS2	99	52.198	Pelodiscus_sinensis
ENSEBUG00000005004	-	85	48.901	ENSPMGG00000021154	rbpms2b	87	51.429	Periophthalmus_magnuspinnatus
ENSEBUG00000005004	-	74	57.534	ENSPCIG00000029447	RBPMS2	90	51.064	Phascolarctos_cinereus
ENSEBUG00000005004	-	98	49.275	ENSPFOG00000016067	rbpms2b	98	51.500	Poecilia_formosa
ENSEBUG00000005004	-	98	49.275	ENSPLAG00000008831	rbpms2b	98	51.500	Poecilia_latipinna
ENSEBUG00000005004	-	98	49.275	ENSPMEG00000007868	rbpms2b	98	51.500	Poecilia_mexicana
ENSEBUG00000005004	-	81	57.764	ENSPREG00000005953	rbpms2b	99	49.756	Poecilia_reticulata
ENSEBUG00000005004	-	76	54.902	ENSPPYG00000006553	-	83	49.215	Pongo_abelii
ENSEBUG00000005004	-	73	57.639	ENSPCAG00000015797	RBPMS2	99	51.934	Procavia_capensis
ENSEBUG00000005004	-	74	57.143	ENSPCOG00000023778	RBPMS2	87	50.000	Propithecus_coquereli
ENSEBUG00000005004	-	73	57.639	ENSPVAG00000016622	RBPMS2	99	51.630	Pteropus_vampyrus
ENSEBUG00000005004	-	98	49.275	ENSPNYG00000010761	rbpms2b	73	51.500	Pundamilia_nyererei
ENSEBUG00000005004	-	98	48.309	ENSPNAG00000027343	rbpms2a	98	50.500	Pygocentrus_nattereri
ENSEBUG00000005004	-	98	50.746	ENSPNAG00000004816	rbpms2b	98	51.337	Pygocentrus_nattereri
ENSEBUG00000005004	-	90	50.000	ENSRNOG00000015896	Rbpms2	87	51.872	Rattus_norvegicus
ENSEBUG00000005004	-	73	57.639	ENSRROG00000006473	RBPMS2	89	49.730	Rhinopithecus_roxellana
ENSEBUG00000005004	-	73	57.639	ENSSBOG00000020118	RBPMS2	99	51.099	Saimiri_boliviensis_boliviensis
ENSEBUG00000005004	-	89	50.265	ENSSHAG00000007448	RBPMS2	99	52.747	Sarcophilus_harrisii
ENSEBUG00000005004	-	98	47.596	ENSSFOG00015010476	rbpms2b	98	51.630	Scleropages_formosus
ENSEBUG00000005004	-	98	49.275	ENSSFOG00015022055	rbpms2	98	51.500	Scleropages_formosus
ENSEBUG00000005004	-	90	50.000	ENSSMAG00000009743	rbpms2b	61	52.406	Scophthalmus_maximus
ENSEBUG00000005004	-	81	57.764	ENSSLDG00000023070	rbpms2b	72	50.244	Seriola_lalandi_dorsalis
ENSEBUG00000005004	-	82	55.215	ENSSPUG00000006378	RBPMS2	99	50.000	Sphenodon_punctatus
ENSEBUG00000005004	-	98	49.275	ENSSPAG00000001979	rbpms2b	98	51.500	Stegastes_partitus
ENSEBUG00000005004	-	74	57.143	ENSSSCG00000004549	RBPMS2	86	50.265	Sus_scrofa
ENSEBUG00000005004	-	72	58.741	ENSTGUG00000004722	RBPMS2	97	55.346	Taeniopygia_guttata
ENSEBUG00000005004	-	98	50.500	ENSTRUG00000025375	rbpms2b	73	51.232	Takifugu_rubripes
ENSEBUG00000005004	-	73	58.621	ENSTTRG00000011840	RBPMS2	89	50.802	Tursiops_truncatus
ENSEBUG00000005004	-	73	58.333	ENSUMAG00000012614	RBPMS2	84	52.717	Ursus_maritimus
ENSEBUG00000005004	-	76	56.000	ENSVVUG00000013801	RBPMS2	86	52.542	Vulpes_vulpes
ENSEBUG00000005004	-	91	49.485	ENSXCOG00000000567	rbpms2b	98	50.251	Xiphophorus_couchianus
ENSEBUG00000005004	-	98	49.275	ENSXMAG00000001210	rbpms2b	98	51.500	Xiphophorus_maculatus