EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005203 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 9868 bases
Position: chrFYBX02010628.1:1382010-1391877
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008015	tRNA_int_end_N2	PF12928.7	8.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008507	TSEN54-201	1596	-	ENSEBUP00000008015	531 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005203	TSEN54	95	36.961	ENSG00000182173	TSEN54	90	57.463	Homo_sapiens
ENSEBUG00000005203	TSEN54	95	31.660	ENSAPOG00000009659	tsen54	95	32.046	Acanthochromis_polyacanthus
ENSEBUG00000005203	TSEN54	95	36.673	ENSAMEG00000009414	TSEN54	96	36.673	Ailuropoda_melanoleuca
ENSEBUG00000005203	TSEN54	95	31.660	ENSAOCG00000000152	tsen54	94	31.660	Amphiprion_ocellaris
ENSEBUG00000005203	TSEN54	95	31.467	ENSAPEG00000018931	tsen54	94	31.853	Amphiprion_percula
ENSEBUG00000005203	TSEN54	70	43.125	ENSATEG00000019860	tsen54	71	43.125	Anabas_testudineus
ENSEBUG00000005203	TSEN54	84	32.059	ENSAPLG00000009419	TSEN54	99	32.059	Anas_platyrhynchos
ENSEBUG00000005203	TSEN54	72	51.250	ENSACAG00000006714	TSEN54	99	33.771	Anolis_carolinensis
ENSEBUG00000005203	TSEN54	95	35.917	ENSANAG00000024061	TSEN54	96	36.842	Aotus_nancymaae
ENSEBUG00000005203	TSEN54	95	32.115	ENSACLG00000019800	tsen54	96	31.407	Astatotilapia_calliptera
ENSEBUG00000005203	TSEN54	69	45.333	ENSAMXG00000006546	tsen54	73	45.333	Astyanax_mexicanus
ENSEBUG00000005203	TSEN54	95	36.381	ENSBTAG00000000824	TSEN54	97	36.364	Bos_taurus
ENSEBUG00000005203	TSEN54	95	37.100	ENSCAFG00000004798	TSEN54	97	37.127	Canis_familiaris
ENSEBUG00000005203	TSEN54	95	37.100	ENSCAFG00020000312	TSEN54	97	37.127	Canis_lupus_dingo
ENSEBUG00000005203	TSEN54	95	36.243	ENSCHIG00000019908	TSEN54	97	36.075	Capra_hircus
ENSEBUG00000005203	TSEN54	84	32.563	ENSTSYG00000037439	TSEN54	99	32.563	Carlito_syrichta
ENSEBUG00000005203	TSEN54	95	37.121	ENSCCAG00000036624	TSEN54	96	37.288	Cebus_capucinus
ENSEBUG00000005203	TSEN54	95	37.218	ENSCATG00000042877	TSEN54	96	36.891	Cercocebus_atys
ENSEBUG00000005203	TSEN54	95	36.158	ENSCLAG00000002924	TSEN54	96	36.158	Chinchilla_lanigera
ENSEBUG00000005203	TSEN54	95	35.902	ENSCSAG00000004809	TSEN54	97	36.704	Chlorocebus_sabaeus
ENSEBUG00000005203	TSEN54	95	36.174	ENSCPBG00000028071	TSEN54	97	36.364	Chrysemys_picta_bellii
ENSEBUG00000005203	TSEN54	95	37.786	ENSCANG00000028053	TSEN54	97	37.786	Colobus_angolensis_palliatus
ENSEBUG00000005203	TSEN54	95	36.330	ENSCGRG00001020029	Tsen54	97	36.330	Cricetulus_griseus_chok1gshd
ENSEBUG00000005203	TSEN54	82	31.613	ENSCGRG00000016289	Tsen54	99	31.613	Cricetulus_griseus_crigri
ENSEBUG00000005203	TSEN54	95	36.952	ENSDNOG00000018452	TSEN54	97	37.192	Dasypus_novemcinctus
ENSEBUG00000005203	TSEN54	69	58.108	ENSDORG00000004073	Tsen54	97	36.792	Dipodomys_ordii
ENSEBUG00000005203	TSEN54	95	36.911	ENSEASG00005000579	TSEN54	97	36.911	Equus_asinus_asinus
ENSEBUG00000005203	TSEN54	95	36.604	ENSECAG00000004924	TSEN54	97	36.604	Equus_caballus
ENSEBUG00000005203	TSEN54	84	30.490	ENSEEUG00000008467	TSEN54	99	30.917	Erinaceus_europaeus
ENSEBUG00000005203	TSEN54	95	30.071	ENSELUG00000017703	tsen54	90	30.796	Esox_lucius
ENSEBUG00000005203	TSEN54	95	36.673	ENSFCAG00000023712	TSEN54	97	36.692	Felis_catus
ENSEBUG00000005203	TSEN54	91	33.789	ENSFALG00000001119	TSEN54	92	33.789	Ficedula_albicollis
ENSEBUG00000005203	TSEN54	84	32.976	ENSFDAG00000019090	TSEN54	99	32.976	Fukomys_damarensis
ENSEBUG00000005203	TSEN54	69	43.919	ENSFHEG00000005470	tsen54	73	43.919	Fundulus_heteroclitus
ENSEBUG00000005203	TSEN54	61	41.905	ENSGMOG00000013146	tsen54	80	41.905	Gadus_morhua
ENSEBUG00000005203	TSEN54	91	32.031	ENSGALG00000047163	TSEN54	96	32.031	Gallus_gallus
ENSEBUG00000005203	TSEN54	94	33.524	ENSGAFG00000005111	tsen54	95	33.712	Gambusia_affinis
ENSEBUG00000005203	TSEN54	61	52.336	ENSGACG00000014987	tsen54	71	52.336	Gasterosteus_aculeatus
ENSEBUG00000005203	TSEN54	96	35.741	ENSGAGG00000006825	TSEN54	97	35.926	Gopherus_agassizii
ENSEBUG00000005203	TSEN54	95	37.051	ENSGGOG00000009417	TSEN54	99	37.853	Gorilla_gorilla
ENSEBUG00000005203	TSEN54	87	30.769	ENSHBUG00000018296	tsen54	90	30.000	Haplochromis_burtoni
ENSEBUG00000005203	TSEN54	95	36.590	ENSHGLG00000007979	TSEN54	97	36.590	Heterocephalus_glaber_female
ENSEBUG00000005203	TSEN54	95	35.632	ENSHGLG00100005497	TSEN54	97	35.632	Heterocephalus_glaber_male
ENSEBUG00000005203	TSEN54	95	37.051	ENSSTOG00000012883	TSEN54	97	37.051	Ictidomys_tridecemlineatus
ENSEBUG00000005203	TSEN54	95	36.038	ENSJJAG00000007365	Tsen54	97	36.038	Jaculus_jaculus
ENSEBUG00000005203	TSEN54	94	32.216	ENSKMAG00000006944	tsen54	95	32.216	Kryptolebias_marmoratus
ENSEBUG00000005203	TSEN54	70	43.125	ENSLBEG00000004199	tsen54	96	31.638	Labrus_bergylta
ENSEBUG00000005203	TSEN54	95	30.654	ENSLACG00000009497	TSEN54	99	30.654	Latimeria_chalumnae
ENSEBUG00000005203	TSEN54	68	45.455	ENSLOCG00000011191	tsen54	69	45.455	Lepisosteus_oculatus
ENSEBUG00000005203	TSEN54	91	35.306	ENSLAFG00000011655	TSEN54	92	35.686	Loxodonta_africana
ENSEBUG00000005203	TSEN54	95	36.557	ENSMFAG00000000712	TSEN54	97	36.891	Macaca_fascicularis
ENSEBUG00000005203	TSEN54	95	36.557	ENSMNEG00000029199	TSEN54	97	37.218	Macaca_nemestrina
ENSEBUG00000005203	TSEN54	58	50.000	ENSMLEG00000044168	TSEN54	88	32.914	Mandrillus_leucophaeus
ENSEBUG00000005203	TSEN54	71	43.114	ENSMAMG00000019773	tsen54	75	43.114	Mastacembelus_armatus
ENSEBUG00000005203	TSEN54	95	32.115	ENSMZEG00005000884	tsen54	96	32.115	Maylandia_zebra
ENSEBUG00000005203	TSEN54	92	32.821	ENSMGAG00000009556	TSEN54	94	33.013	Meleagris_gallopavo
ENSEBUG00000005203	TSEN54	95	37.218	ENSMAUG00000016838	Tsen54	97	37.218	Mesocricetus_auratus
ENSEBUG00000005203	TSEN54	95	36.520	ENSMICG00000044012	TSEN54	97	37.429	Microcebus_murinus
ENSEBUG00000005203	TSEN54	95	36.194	ENSMOCG00000021585	Tsen54	97	36.194	Microtus_ochrogaster
ENSEBUG00000005203	TSEN54	68	39.556	ENSMMOG00000020189	tsen54	98	37.450	Mola_mola
ENSEBUG00000005203	TSEN54	95	34.879	ENSMODG00000007438	TSEN54	95	34.879	Monodelphis_domestica
ENSEBUG00000005203	TSEN54	95	31.629	ENSMALG00000020573	tsen54	97	32.197	Monopterus_albus
ENSEBUG00000005203	TSEN54	95	35.305	MGP_CAROLIEiJ_G0017417	Tsen54	97	35.305	Mus_caroli
ENSEBUG00000005203	TSEN54	95	35.926	ENSMUSG00000020781	Tsen54	97	35.926	Mus_musculus
ENSEBUG00000005203	TSEN54	95	36.654	MGP_PahariEiJ_G0018547	Tsen54	97	36.654	Mus_pahari
ENSEBUG00000005203	TSEN54	95	36.178	MGP_SPRETEiJ_G0018262	Tsen54	97	36.178	Mus_spretus
ENSEBUG00000005203	TSEN54	95	35.835	ENSMPUG00000013870	TSEN54	97	35.940	Mustela_putorius_furo
ENSEBUG00000005203	TSEN54	95	35.417	ENSMLUG00000015298	TSEN54	97	35.019	Myotis_lucifugus
ENSEBUG00000005203	TSEN54	96	36.029	ENSNGAG00000015673	Tsen54	99	36.029	Nannospalax_galili
ENSEBUG00000005203	TSEN54	87	32.790	ENSMEUG00000011908	TSEN54	99	32.790	Notamacropus_eugenii
ENSEBUG00000005203	TSEN54	62	68.519	ENSOPRG00000012513	TSEN54	66	68.519	Ochotona_princeps
ENSEBUG00000005203	TSEN54	95	31.818	ENSONIG00000009543	tsen54	96	31.818	Oreochromis_niloticus
ENSEBUG00000005203	TSEN54	95	34.935	ENSOCUG00000009875	TSEN54	97	34.935	Oryctolagus_cuniculus
ENSEBUG00000005203	TSEN54	95	31.559	ENSORLG00000000852	tsen54	97	31.559	Oryzias_latipes
ENSEBUG00000005203	TSEN54	73	41.358	ENSORLG00020018221	tsen54	79	42.675	Oryzias_latipes_hni
ENSEBUG00000005203	TSEN54	73	43.312	ENSORLG00015009413	tsen54	80	43.312	Oryzias_latipes_hsok
ENSEBUG00000005203	TSEN54	95	30.962	ENSOMEG00000014402	tsen54	94	30.962	Oryzias_melastigma
ENSEBUG00000005203	TSEN54	97	36.081	ENSOGAG00000001442	TSEN54	99	36.081	Otolemur_garnettii
ENSEBUG00000005203	TSEN54	84	31.545	ENSOARG00000010361	TSEN54	99	31.545	Ovis_aries
ENSEBUG00000005203	TSEN54	66	56.429	ENSPPAG00000043519	TSEN54	99	36.680	Pan_paniscus
ENSEBUG00000005203	TSEN54	95	36.673	ENSPPRG00000009162	TSEN54	97	36.692	Panthera_pardus
ENSEBUG00000005203	TSEN54	84	32.623	ENSPTIG00000019312	TSEN54	96	32.623	Panthera_tigris_altaica
ENSEBUG00000005203	TSEN54	95	37.288	ENSPTRG00000009646	TSEN54	97	37.757	Pan_troglodytes
ENSEBUG00000005203	TSEN54	95	36.090	ENSPANG00000020133	TSEN54	96	36.891	Papio_anubis
ENSEBUG00000005203	TSEN54	62	55.046	ENSPKIG00000023018	tsen54	96	32.079	Paramormyrops_kingsleyae
ENSEBUG00000005203	TSEN54	79	30.942	ENSPSIG00000012807	TSEN54	99	30.942	Pelodiscus_sinensis
ENSEBUG00000005203	TSEN54	60	54.118	ENSPMGG00000019578	tsen54	71	54.118	Periophthalmus_magnuspinnatus
ENSEBUG00000005203	TSEN54	95	37.009	ENSPEMG00000014857	Tsen54	97	37.079	Peromyscus_maniculatus_bairdii
ENSEBUG00000005203	TSEN54	94	32.824	ENSPFOG00000022740	tsen54	95	32.824	Poecilia_formosa
ENSEBUG00000005203	TSEN54	94	32.692	ENSPLAG00000014847	tsen54	95	32.692	Poecilia_latipinna
ENSEBUG00000005203	TSEN54	94	32.692	ENSPMEG00000022876	tsen54	95	32.692	Poecilia_mexicana
ENSEBUG00000005203	TSEN54	94	32.950	ENSPREG00000013090	tsen54	95	32.950	Poecilia_reticulata
ENSEBUG00000005203	TSEN54	63	56.098	ENSPPYG00000008629	TSEN54	99	34.413	Pongo_abelii
ENSEBUG00000005203	TSEN54	62	55.862	ENSPCAG00000002093	TSEN54	68	55.862	Procavia_capensis
ENSEBUG00000005203	TSEN54	95	37.736	ENSPCOG00000027880	TSEN54	97	37.918	Propithecus_coquereli
ENSEBUG00000005203	TSEN54	95	35.860	ENSPVAG00000008446	TSEN54	97	35.609	Pteropus_vampyrus
ENSEBUG00000005203	TSEN54	91	31.176	ENSPNYG00000010217	tsen54	99	30.785	Pundamilia_nyererei
ENSEBUG00000005203	TSEN54	95	31.413	ENSPNAG00000003770	tsen54	96	31.725	Pygocentrus_nattereri
ENSEBUG00000005203	TSEN54	95	36.735	ENSRNOG00000004598	Tsen54	97	36.735	Rattus_norvegicus
ENSEBUG00000005203	TSEN54	95	37.406	ENSRBIG00000043040	TSEN54	97	37.406	Rhinopithecus_bieti
ENSEBUG00000005203	TSEN54	95	37.406	ENSRROG00000030797	TSEN54	97	37.406	Rhinopithecus_roxellana
ENSEBUG00000005203	TSEN54	95	35.348	ENSSHAG00000018127	TSEN54	96	35.348	Sarcophilus_harrisii
ENSEBUG00000005203	TSEN54	73	46.541	ENSSMAG00000012449	tsen54	98	31.758	Scophthalmus_maximus
ENSEBUG00000005203	TSEN54	73	43.125	ENSSDUG00000021506	tsen54	76	43.125	Seriola_dumerili
ENSEBUG00000005203	TSEN54	73	43.125	ENSSLDG00000016303	tsen54	76	43.125	Seriola_lalandi_dorsalis
ENSEBUG00000005203	TSEN54	77	35.116	ENSSPUG00000008988	TSEN54	93	35.116	Sphenodon_punctatus
ENSEBUG00000005203	TSEN54	91	32.335	ENSSPAG00000008098	-	99	32.335	Stegastes_partitus
ENSEBUG00000005203	TSEN54	95	36.278	ENSSSCG00000036852	TSEN54	97	36.278	Sus_scrofa
ENSEBUG00000005203	TSEN54	84	32.272	ENSTGUG00000008548	TSEN54	99	32.272	Taeniopygia_guttata
ENSEBUG00000005203	TSEN54	94	31.898	ENSTRUG00000004230	tsen54	95	31.898	Takifugu_rubripes
ENSEBUG00000005203	TSEN54	55	44.595	ENSTNIG00000011281	tsen54	75	44.595	Tetraodon_nigroviridis
ENSEBUG00000005203	TSEN54	84	33.122	ENSTTRG00000015828	TSEN54	99	33.121	Tursiops_truncatus
ENSEBUG00000005203	TSEN54	79	30.562	ENSUAMG00000010045	TSEN54	99	30.562	Ursus_americanus
ENSEBUG00000005203	TSEN54	82	32.174	ENSUMAG00000008979	TSEN54	99	32.174	Ursus_maritimus
ENSEBUG00000005203	TSEN54	95	37.121	ENSVVUG00000011411	TSEN54	98	37.218	Vulpes_vulpes
ENSEBUG00000005203	TSEN54	95	33.948	ENSXETG00000012532	tsen54	79	58.491	Xenopus_tropicalis
ENSEBUG00000005203	TSEN54	82	36.797	ENSXCOG00000018245	tsen54	98	32.692	Xiphophorus_couchianus
ENSEBUG00000005203	TSEN54	94	33.397	ENSXMAG00000018818	tsen54	95	33.397	Xiphophorus_maculatus