EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005304 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 116649 bases
Position: chrFYBX02009522.1:872402-989050
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	1	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	2	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	3	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	4	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	5	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	6	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	7	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	8	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	9	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	10	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	11	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	12	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	13	14
ENSEBUP00000008217	KH_1	PF00013.29	2.5e-187	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008712	-	3576	-	ENSEBUP00000008217	1191 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005304	hdlbpb	96	70.427	ENSAPOG00000006904	hdlbpb	92	70.427	Acanthochromis_polyacanthus
ENSEBUG00000005304	hdlbpb	94	70.168	ENSACIG00000016154	hdlbpb	93	69.204	Amphilophus_citrinellus
ENSEBUG00000005304	hdlbpb	96	70.402	ENSAOCG00000004083	hdlbpb	94	70.402	Amphiprion_ocellaris
ENSEBUG00000005304	hdlbpb	96	70.256	ENSAPEG00000012270	hdlbpb	92	70.256	Amphiprion_percula
ENSEBUG00000005304	hdlbpb	94	71.129	ENSATEG00000019877	hdlbpb	97	68.495	Anabas_testudineus
ENSEBUG00000005304	hdlbpb	96	73.995	ENSACAG00000003606	-	93	73.995	Anolis_carolinensis
ENSEBUG00000005304	hdlbpb	94	71.142	ENSACLG00000006618	hdlbpb	92	70.342	Astatotilapia_calliptera
ENSEBUG00000005304	hdlbpb	96	61.519	ENSAMXG00000019946	hdlbpb	92	61.519	Astyanax_mexicanus
ENSEBUG00000005304	hdlbpb	96	69.316	ENSCSEG00000000955	hdlbpb	94	69.589	Cynoglossus_semilaevis
ENSEBUG00000005304	hdlbpb	96	70.180	ENSCVAG00000005345	hdlbpb	96	70.351	Cyprinodon_variegatus
ENSEBUG00000005304	hdlbpb	96	69.692	ENSDARG00000061864	hdlbpb	93	69.863	Danio_rerio
ENSEBUG00000005304	hdlbpb	96	60.529	ENSELUG00000019925	hdlbpb	92	60.529	Esox_lucius
ENSEBUG00000005304	hdlbpb	94	66.376	ENSFHEG00000001701	hdlbpb	92	65.668	Fundulus_heteroclitus
ENSEBUG00000005304	hdlbpb	94	72.651	ENSGMOG00000004522	hdlbpb	69	72.651	Gadus_morhua
ENSEBUG00000005304	hdlbpb	96	69.744	ENSGAFG00000005278	hdlbpb	92	69.915	Gambusia_affinis
ENSEBUG00000005304	hdlbpb	95	67.734	ENSGACG00000019361	hdlbpb	92	67.468	Gasterosteus_aculeatus
ENSEBUG00000005304	hdlbpb	94	71.055	ENSHBUG00000018434	hdlbpb	92	70.256	Haplochromis_burtoni
ENSEBUG00000005304	hdlbpb	96	67.692	ENSIPUG00000003291	HDLBP	97	68.728	Ictalurus_punctatus
ENSEBUG00000005304	hdlbpb	94	70.445	ENSKMAG00000016562	hdlbpb	92	69.658	Kryptolebias_marmoratus
ENSEBUG00000005304	hdlbpb	96	69.915	ENSLBEG00000027855	hdlbpb	92	70.085	Labrus_bergylta
ENSEBUG00000005304	hdlbpb	98	63.201	ENSLACG00000007661	hdlbpb	94	63.201	Latimeria_chalumnae
ENSEBUG00000005304	hdlbpb	96	71.318	ENSLOCG00000013909	hdlbpb	93	71.318	Lepisosteus_oculatus
ENSEBUG00000005304	hdlbpb	97	69.635	ENSMAMG00000003035	hdlbpb	95	69.805	Mastacembelus_armatus
ENSEBUG00000005304	hdlbpb	94	71.142	ENSMZEG00005021465	hdlbpb	92	70.342	Maylandia_zebra
ENSEBUG00000005304	hdlbpb	96	69.666	ENSMMOG00000012525	hdlbpb	92	69.666	Mola_mola
ENSEBUG00000005304	hdlbpb	96	69.402	ENSMALG00000008938	hdlbpb	92	69.402	Monopterus_albus
ENSEBUG00000005304	hdlbpb	94	71.229	ENSNBRG00000002236	hdlbpb	92	70.427	Neolamprologus_brichardi
ENSEBUG00000005304	hdlbpb	95	70.711	ENSONIG00000009211	hdlbpb	93	69.924	Oreochromis_niloticus
ENSEBUG00000005304	hdlbpb	95	70.598	ENSORLG00000006581	hdlbpb	96	69.864	Oryzias_latipes
ENSEBUG00000005304	hdlbpb	96	69.573	ENSORLG00020010012	hdlbpb	92	69.744	Oryzias_latipes_hni
ENSEBUG00000005304	hdlbpb	96	69.487	ENSORLG00015006863	hdlbpb	92	69.658	Oryzias_latipes_hsok
ENSEBUG00000005304	hdlbpb	96	69.060	ENSOMEG00000011131	hdlbpb	94	69.231	Oryzias_melastigma
ENSEBUG00000005304	hdlbpb	96	70.282	ENSPKIG00000005966	hdlbpb	93	70.282	Paramormyrops_kingsleyae
ENSEBUG00000005304	hdlbpb	94	74.390	ENSPMGG00000019853	hdlbpb	91	74.390	Periophthalmus_magnuspinnatus
ENSEBUG00000005304	hdlbpb	90	65.000	ENSPMAG00000000249	-	86	64.865	Petromyzon_marinus
ENSEBUG00000005304	hdlbpb	95	78.774	ENSPMAG00000002131	hdlbpb	97	78.774	Petromyzon_marinus
ENSEBUG00000005304	hdlbpb	97	68.692	ENSPFOG00000008755	hdlbpb	92	68.861	Poecilia_formosa
ENSEBUG00000005304	hdlbpb	96	69.573	ENSPLAG00000007055	hdlbpb	92	69.744	Poecilia_latipinna
ENSEBUG00000005304	hdlbpb	96	69.573	ENSPMEG00000001952	hdlbpb	92	69.744	Poecilia_mexicana
ENSEBUG00000005304	hdlbpb	96	69.658	ENSPREG00000012848	hdlbpb	92	69.829	Poecilia_reticulata
ENSEBUG00000005304	hdlbpb	94	71.391	ENSPNYG00000022467	hdlbpb	94	70.342	Pundamilia_nyererei
ENSEBUG00000005304	hdlbpb	96	69.376	ENSPNAG00000011104	hdlbpb	92	69.376	Pygocentrus_nattereri
ENSEBUG00000005304	hdlbpb	98	70.092	ENSSFOG00015023199	hdlbpb	93	70.709	Scleropages_formosus
ENSEBUG00000005304	hdlbpb	96	70.342	ENSSMAG00000008790	hdlbpb	92	70.342	Scophthalmus_maximus
ENSEBUG00000005304	hdlbpb	94	70.942	ENSSDUG00000020694	hdlbpb	92	69.974	Seriola_dumerili
ENSEBUG00000005304	hdlbpb	94	71.016	ENSSLDG00000020807	hdlbpb	92	70.043	Seriola_lalandi_dorsalis
ENSEBUG00000005304	hdlbpb	96	73.202	ENSSPUG00000018688	-	93	73.545	Sphenodon_punctatus
ENSEBUG00000005304	hdlbpb	96	69.915	ENSSPAG00000016969	hdlbpb	92	70.085	Stegastes_partitus
ENSEBUG00000005304	hdlbpb	97	68.808	ENSTRUG00000012888	hdlbpb	93	68.977	Takifugu_rubripes
ENSEBUG00000005304	hdlbpb	96	68.819	ENSTNIG00000002555	hdlbpb	92	68.819	Tetraodon_nigroviridis
ENSEBUG00000005304	hdlbpb	96	66.915	ENSXCOG00000001797	hdlbpb	92	66.915	Xiphophorus_couchianus
ENSEBUG00000005304	hdlbpb	96	69.316	ENSXMAG00000015633	hdlbpb	92	69.487	Xiphophorus_maculatus