EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005445 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 25620 bases
Position: chrFYBX02010753.1:675759-701378
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008423	SHQ1	PF04925.15	5.6e-58	1	1
ENSEBUP00000008447	SHQ1	PF04925.15	5.6e-58	1	1
ENSEBUP00000008410	SHQ1	PF04925.15	7.2e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008926	-	6133	-	ENSEBUP00000008423	436 (aa)	-	-
ENSEBUT00000008950	-	4576	-	ENSEBUP00000008447	436 (aa)	-	-
ENSEBUT00000008912	-	6313	-	ENSEBUP00000008410	496 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005445	shq1	72	49.536	ENSG00000144736	SHQ1	100	58.182	Homo_sapiens
ENSEBUG00000005445	shq1	79	49.288	ENSAPOG00000000397	shq1	62	47.382	Acanthochromis_polyacanthus
ENSEBUG00000005445	shq1	84	47.606	ENSAMEG00000015140	SHQ1	64	48.404	Ailuropoda_melanoleuca
ENSEBUG00000005445	shq1	73	50.313	ENSACIG00000021249	shq1	61	47.709	Amphilophus_citrinellus
ENSEBUG00000005445	shq1	79	49.716	ENSAOCG00000023311	shq1	62	47.781	Amphiprion_ocellaris
ENSEBUG00000005445	shq1	79	49.432	ENSAPEG00000021686	shq1	61	48.021	Amphiprion_percula
ENSEBUG00000005445	shq1	73	48.308	ENSATEG00000008475	shq1	60	46.467	Anabas_testudineus
ENSEBUG00000005445	shq1	80	46.910	ENSAPLG00000013926	SHQ1	73	47.721	Anas_platyrhynchos
ENSEBUG00000005445	shq1	76	50.000	ENSACAG00000014809	SHQ1	52	49.570	Anolis_carolinensis
ENSEBUG00000005445	shq1	87	46.530	ENSANAG00000029241	SHQ1	65	48.806	Aotus_nancymaae
ENSEBUG00000005445	shq1	87	35.433	ENSANAG00000030500	-	64	35.422	Aotus_nancymaae
ENSEBUG00000005445	shq1	79	48.725	ENSACLG00000023077	shq1	63	44.913	Astatotilapia_calliptera
ENSEBUG00000005445	shq1	76	44.478	ENSAMXG00000043822	shq1	63	42.507	Astyanax_mexicanus
ENSEBUG00000005445	shq1	69	50.974	ENSBTAG00000005436	SHQ1	64	47.872	Bos_taurus
ENSEBUG00000005445	shq1	72	49.691	ENSCJAG00000015131	SHQ1	65	48.000	Callithrix_jacchus
ENSEBUG00000005445	shq1	69	50.809	ENSCAFG00000006434	SHQ1	65	48.677	Canis_familiaris
ENSEBUG00000005445	shq1	69	51.133	ENSCAFG00020016743	SHQ1	68	48.942	Canis_lupus_dingo
ENSEBUG00000005445	shq1	69	50.809	ENSCHIG00000012271	SHQ1	61	47.692	Capra_hircus
ENSEBUG00000005445	shq1	72	47.059	ENSTSYG00000014439	SHQ1	70	46.667	Carlito_syrichta
ENSEBUG00000005445	shq1	73	44.136	ENSCAPG00000009343	SHQ1	53	59.649	Cavia_aperea
ENSEBUG00000005445	shq1	73	50.000	ENSCPOG00000011443	SHQ1	74	45.455	Cavia_porcellus
ENSEBUG00000005445	shq1	69	48.693	ENSCCAG00000027080	SHQ1	66	46.814	Cebus_capucinus
ENSEBUG00000005445	shq1	87	38.918	ENSCCAG00000036087	-	65	39.037	Cebus_capucinus
ENSEBUG00000005445	shq1	72	48.765	ENSCATG00000041238	SHQ1	68	47.200	Cercocebus_atys
ENSEBUG00000005445	shq1	72	49.693	ENSCLAG00000004206	SHQ1	65	48.138	Chinchilla_lanigera
ENSEBUG00000005445	shq1	88	44.501	ENSCSAG00000011514	SHQ1	79	46.114	Chlorocebus_sabaeus
ENSEBUG00000005445	shq1	51	48.035	ENSCHOG00000003273	-	66	48.035	Choloepus_hoffmanni
ENSEBUG00000005445	shq1	77	49.856	ENSCPBG00000006441	SHQ1	63	47.179	Chrysemys_picta_bellii
ENSEBUG00000005445	shq1	74	38.906	ENSCING00000008013	-	75	37.644	Ciona_intestinalis
ENSEBUG00000005445	shq1	68	38.487	ENSCSAVG00000002332	-	77	36.994	Ciona_savignyi
ENSEBUG00000005445	shq1	72	48.457	ENSCANG00000039295	SHQ1	65	46.667	Colobus_angolensis_palliatus
ENSEBUG00000005445	shq1	99	45.759	ENSCGRG00001012583	Shq1	69	58.209	Cricetulus_griseus_chok1gshd
ENSEBUG00000005445	shq1	99	45.759	ENSCGRG00000009849	Shq1	69	58.209	Cricetulus_griseus_crigri
ENSEBUG00000005445	shq1	73	49.691	ENSCSEG00000007829	shq1	61	47.105	Cynoglossus_semilaevis
ENSEBUG00000005445	shq1	78	47.143	ENSCVAG00000020049	shq1	64	46.438	Cyprinodon_variegatus
ENSEBUG00000005445	shq1	78	48.538	ENSDARG00000058522	shq1	62	47.967	Danio_rerio
ENSEBUG00000005445	shq1	72	49.693	ENSDNOG00000033937	SHQ1	65	48.936	Dasypus_novemcinctus
ENSEBUG00000005445	shq1	72	42.945	ENSETEG00000005766	SHQ1	65	42.287	Echinops_telfairi
ENSEBUG00000005445	shq1	72	48.923	ENSEASG00005002237	SHQ1	65	49.337	Equus_asinus_asinus
ENSEBUG00000005445	shq1	72	49.231	ENSECAG00000015673	SHQ1	64	49.602	Equus_caballus
ENSEBUG00000005445	shq1	72	50.307	ENSEEUG00000010568	SHQ1	65	49.733	Erinaceus_europaeus
ENSEBUG00000005445	shq1	72	49.062	ENSELUG00000003476	shq1	63	47.467	Esox_lucius
ENSEBUG00000005445	shq1	72	50.613	ENSFCAG00000012781	SHQ1	66	47.872	Felis_catus
ENSEBUG00000005445	shq1	73	50.153	ENSFALG00000013428	SHQ1	63	46.770	Ficedula_albicollis
ENSEBUG00000005445	shq1	72	49.538	ENSFDAG00000005595	SHQ1	55	48.343	Fukomys_damarensis
ENSEBUG00000005445	shq1	73	48.485	ENSFHEG00000017552	shq1	63	46.419	Fundulus_heteroclitus
ENSEBUG00000005445	shq1	68	50.993	ENSGMOG00000007350	shq1	77	51.325	Gadus_morhua
ENSEBUG00000005445	shq1	78	50.867	ENSGALG00000007798	SHQ1	60	48.787	Gallus_gallus
ENSEBUG00000005445	shq1	71	50.637	ENSGACG00000011797	shq1	77	51.974	Gasterosteus_aculeatus
ENSEBUG00000005445	shq1	72	48.457	ENSGGOG00000034818	SHQ1	68	46.933	Gorilla_gorilla
ENSEBUG00000005445	shq1	79	48.580	ENSHBUG00000010857	shq1	61	47.861	Haplochromis_burtoni
ENSEBUG00000005445	shq1	72	49.080	ENSHGLG00000003637	SHQ1	58	47.606	Heterocephalus_glaber_female
ENSEBUG00000005445	shq1	72	49.080	ENSHGLG00100011957	SHQ1	58	47.606	Heterocephalus_glaber_male
ENSEBUG00000005445	shq1	90	45.209	ENSHCOG00000010799	shq1	63	46.702	Hippocampus_comes
ENSEBUG00000005445	shq1	78	48.696	ENSIPUG00000001247	shq1	64	47.326	Ictalurus_punctatus
ENSEBUG00000005445	shq1	73	49.847	ENSSTOG00000010043	SHQ1	68	48.257	Ictidomys_tridecemlineatus
ENSEBUG00000005445	shq1	73	49.085	ENSJJAG00000017611	Shq1	66	47.872	Jaculus_jaculus
ENSEBUG00000005445	shq1	78	47.839	ENSKMAG00000004457	shq1	63	46.257	Kryptolebias_marmoratus
ENSEBUG00000005445	shq1	81	48.895	ENSLACG00000014243	SHQ1	56	49.062	Latimeria_chalumnae
ENSEBUG00000005445	shq1	72	50.617	ENSLOCG00000009970	shq1	65	46.684	Lepisosteus_oculatus
ENSEBUG00000005445	shq1	57	42.510	ENSMFAG00000037396	-	55	41.946	Macaca_fascicularis
ENSEBUG00000005445	shq1	72	48.765	ENSMFAG00000039148	SHQ1	68	47.200	Macaca_fascicularis
ENSEBUG00000005445	shq1	58	42.629	ENSMMUG00000021761	-	55	41.946	Macaca_mulatta
ENSEBUG00000005445	shq1	72	48.765	ENSMMUG00000009571	SHQ1	68	47.200	Macaca_mulatta
ENSEBUG00000005445	shq1	72	48.765	ENSMNEG00000032667	SHQ1	65	47.200	Macaca_nemestrina
ENSEBUG00000005445	shq1	72	48.765	ENSMLEG00000038493	SHQ1	65	47.200	Mandrillus_leucophaeus
ENSEBUG00000005445	shq1	79	48.305	ENSMAMG00000023432	shq1	59	46.354	Mastacembelus_armatus
ENSEBUG00000005445	shq1	79	48.580	ENSMZEG00005008649	shq1	61	47.861	Maylandia_zebra
ENSEBUG00000005445	shq1	78	50.144	ENSMGAG00000009640	SHQ1	61	48.663	Meleagris_gallopavo
ENSEBUG00000005445	shq1	80	49.861	ENSMAUG00000022030	Shq1	66	49.062	Mesocricetus_auratus
ENSEBUG00000005445	shq1	85	47.120	ENSMICG00000009224	SHQ1	69	48.806	Microcebus_murinus
ENSEBUG00000005445	shq1	79	50.000	ENSMOCG00000017836	Shq1	71	54.167	Microtus_ochrogaster
ENSEBUG00000005445	shq1	78	47.262	ENSMMOG00000010569	shq1	62	46.900	Mola_mola
ENSEBUG00000005445	shq1	77	47.414	ENSMODG00000003926	SHQ1	62	47.414	Monodelphis_domestica
ENSEBUG00000005445	shq1	79	48.305	ENSMALG00000008870	shq1	61	48.267	Monopterus_albus
ENSEBUG00000005445	shq1	99	45.111	MGP_CAROLIEiJ_G0028689	Shq1	78	46.222	Mus_caroli
ENSEBUG00000005445	shq1	99	45.111	ENSMUSG00000035378	Shq1	78	46.222	Mus_musculus
ENSEBUG00000005445	shq1	99	44.444	MGP_PahariEiJ_G0022440	Shq1	69	57.463	Mus_pahari
ENSEBUG00000005445	shq1	99	45.333	MGP_SPRETEiJ_G0029717	Shq1	78	46.444	Mus_spretus
ENSEBUG00000005445	shq1	99	42.733	ENSMPUG00000017006	SHQ1	64	50.133	Mustela_putorius_furo
ENSEBUG00000005445	shq1	88	43.939	ENSMLUG00000013539	SHQ1	73	45.855	Myotis_lucifugus
ENSEBUG00000005445	shq1	89	43.878	ENSNGAG00000023317	Shq1	64	46.216	Nannospalax_galili
ENSEBUG00000005445	shq1	79	48.295	ENSNBRG00000024004	shq1	72	47.733	Neolamprologus_brichardi
ENSEBUG00000005445	shq1	88	45.780	ENSNLEG00000002731	SHQ1	68	48.267	Nomascus_leucogenys
ENSEBUG00000005445	shq1	61	35.055	ENSMEUG00000009350	-	51	34.926	Notamacropus_eugenii
ENSEBUG00000005445	shq1	73	48.624	ENSODEG00000009192	SHQ1	70	46.736	Octodon_degus
ENSEBUG00000005445	shq1	79	48.295	ENSONIG00000020264	shq1	61	47.594	Oreochromis_niloticus
ENSEBUG00000005445	shq1	72	49.387	ENSOCUG00000016695	SHQ1	63	47.733	Oryctolagus_cuniculus
ENSEBUG00000005445	shq1	73	49.689	ENSORLG00000023538	shq1	65	47.425	Oryzias_latipes
ENSEBUG00000005445	shq1	73	50.000	ENSORLG00020003697	shq1	64	47.696	Oryzias_latipes_hni
ENSEBUG00000005445	shq1	73	50.000	ENSORLG00015021040	shq1	65	47.425	Oryzias_latipes_hsok
ENSEBUG00000005445	shq1	73	48.916	ENSOMEG00000001225	shq1	65	46.883	Oryzias_melastigma
ENSEBUG00000005445	shq1	99	42.484	ENSOGAG00000003898	SHQ1	65	48.128	Otolemur_garnettii
ENSEBUG00000005445	shq1	72	48.640	ENSOARG00000009547	SHQ1	66	47.656	Ovis_aries
ENSEBUG00000005445	shq1	72	50.000	ENSPPAG00000027714	SHQ1	68	48.267	Pan_paniscus
ENSEBUG00000005445	shq1	86	39.362	ENSPPAG00000043263	-	67	41.389	Pan_paniscus
ENSEBUG00000005445	shq1	72	50.613	ENSPPRG00000004769	SHQ1	65	47.872	Panthera_pardus
ENSEBUG00000005445	shq1	70	49.839	ENSPTIG00000011478	SHQ1	65	47.368	Panthera_tigris_altaica
ENSEBUG00000005445	shq1	72	50.000	ENSPTRG00000015106	SHQ1	68	48.267	Pan_troglodytes
ENSEBUG00000005445	shq1	86	39.096	ENSPTRG00000048303	-	67	41.111	Pan_troglodytes
ENSEBUG00000005445	shq1	72	49.536	ENSPANG00000002881	SHQ1	68	47.467	Papio_anubis
ENSEBUG00000005445	shq1	76	47.605	ENSPKIG00000021517	shq1	60	46.939	Paramormyrops_kingsleyae
ENSEBUG00000005445	shq1	81	50.413	ENSPSIG00000005536	SHQ1	64	48.346	Pelodiscus_sinensis
ENSEBUG00000005445	shq1	73	42.415	ENSPMGG00000008838	shq1	63	40.431	Periophthalmus_magnuspinnatus
ENSEBUG00000005445	shq1	69	51.780	ENSPEMG00000000251	Shq1	69	57.463	Peromyscus_maniculatus_bairdii
ENSEBUG00000005445	shq1	77	48.864	ENSPMAG00000005372	shq1	80	49.582	Petromyzon_marinus
ENSEBUG00000005445	shq1	78	46.857	ENSPFOG00000003118	shq1	67	46.341	Poecilia_formosa
ENSEBUG00000005445	shq1	78	47.262	ENSPMEG00000011076	shq1	79	47.091	Poecilia_mexicana
ENSEBUG00000005445	shq1	69	49.351	ENSPREG00000000591	shq1	69	45.699	Poecilia_reticulata
ENSEBUG00000005445	shq1	72	50.617	ENSPPYG00000013717	SHQ1	64	48.396	Pongo_abelii
ENSEBUG00000005445	shq1	73	50.606	ENSPCAG00000009035	SHQ1	66	48.541	Procavia_capensis
ENSEBUG00000005445	shq1	72	49.849	ENSPCOG00000008415	SHQ1	65	49.215	Propithecus_coquereli
ENSEBUG00000005445	shq1	72	48.466	ENSPVAG00000017392	SHQ1	65	48.276	Pteropus_vampyrus
ENSEBUG00000005445	shq1	79	48.580	ENSPNYG00000003878	shq1	61	47.861	Pundamilia_nyererei
ENSEBUG00000005445	shq1	76	49.258	ENSPNAG00000026840	shq1	61	46.543	Pygocentrus_nattereri
ENSEBUG00000005445	shq1	79	48.876	ENSRNOG00000005433	Shq1	72	49.333	Rattus_norvegicus
ENSEBUG00000005445	shq1	73	44.860	ENSRBIG00000026280	SHQ1	68	43.514	Rhinopithecus_bieti
ENSEBUG00000005445	shq1	72	48.148	ENSRROG00000034126	SHQ1	65	46.133	Rhinopithecus_roxellana
ENSEBUG00000005445	shq1	69	49.351	ENSSBOG00000021038	SHQ1	65	47.632	Saimiri_boliviensis_boliviensis
ENSEBUG00000005445	shq1	77	45.977	ENSSHAG00000015077	SHQ1	62	45.977	Sarcophilus_harrisii
ENSEBUG00000005445	shq1	78	48.837	ENSSFOG00015016241	shq1	68	47.059	Scleropages_formosus
ENSEBUG00000005445	shq1	79	50.284	ENSSMAG00000016151	shq1	60	50.000	Scophthalmus_maximus
ENSEBUG00000005445	shq1	73	49.846	ENSSDUG00000011986	shq1	61	47.507	Seriola_dumerili
ENSEBUG00000005445	shq1	73	49.843	ENSSLDG00000013908	shq1	61	47.568	Seriola_lalandi_dorsalis
ENSEBUG00000005445	shq1	99	38.288	ENSSARG00000007119	SHQ1	78	36.961	Sorex_araneus
ENSEBUG00000005445	shq1	77	50.430	ENSSPUG00000011526	-	69	49.600	Sphenodon_punctatus
ENSEBUG00000005445	shq1	72	49.693	ENSSSCG00000011518	SHQ1	65	48.806	Sus_scrofa
ENSEBUG00000005445	shq1	73	47.904	ENSTGUG00000009933	SHQ1	67	45.153	Taeniopygia_guttata
ENSEBUG00000005445	shq1	72	45.370	ENSTRUG00000009446	shq1	63	45.013	Takifugu_rubripes
ENSEBUG00000005445	shq1	72	47.840	ENSTNIG00000007354	shq1	80	46.049	Tetraodon_nigroviridis
ENSEBUG00000005445	shq1	58	45.385	ENSTBEG00000011295	SHQ1	56	35.913	Tupaia_belangeri
ENSEBUG00000005445	shq1	81	47.107	ENSTTRG00000005320	SHQ1	65	47.594	Tursiops_truncatus
ENSEBUG00000005445	shq1	84	48.378	ENSUMAG00000024031	SHQ1	63	49.189	Ursus_maritimus
ENSEBUG00000005445	shq1	56	51.587	ENSVPAG00000004880	SHQ1	66	47.578	Vicugna_pacos
ENSEBUG00000005445	shq1	69	50.485	ENSVVUG00000013906	SHQ1	65	48.806	Vulpes_vulpes
ENSEBUG00000005445	shq1	80	48.286	ENSXETG00000032215	shq1	61	47.027	Xenopus_tropicalis