EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005495 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3 (1 of many)
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 144848 bases
Position: chrFYBX02010330.1:811436-956283
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008493	KH_1	PF00013.29	5.2e-32	1	2
ENSEBUP00000008493	KH_1	PF00013.29	5.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000008998	-	2011	-	ENSEBUP00000008493	331 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005495	pcbp3	60	68.159	ENSEBUG00000009697	zgc:110045	90	69.613
ENSEBUG00000005495	pcbp3	80	64.338	ENSEBUG00000007485	-	96	67.965
ENSEBUG00000005495	pcbp3	57	85.938	ENSEBUG00000016192	pcbp3	96	85.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005495	pcbp3	74	70.445	ENSAPOG00000016582	-	90	70.445	Acanthochromis_polyacanthus
ENSEBUG00000005495	pcbp3	68	71.239	ENSAPOG00000020003	pcbp3	82	71.239	Acanthochromis_polyacanthus
ENSEBUG00000005495	pcbp3	74	71.545	ENSAMEG00000001697	-	73	65.759	Ailuropoda_melanoleuca
ENSEBUG00000005495	pcbp3	68	63.855	ENSACIG00000010933	pcbp3	94	62.719	Amphilophus_citrinellus
ENSEBUG00000005495	pcbp3	74	65.748	ENSACIG00000002739	-	92	65.748	Amphilophus_citrinellus
ENSEBUG00000005495	pcbp3	62	70.874	ENSAOCG00000007806	-	93	70.874	Amphiprion_ocellaris
ENSEBUG00000005495	pcbp3	68	74.336	ENSAOCG00000008592	-	98	74.336	Amphiprion_ocellaris
ENSEBUG00000005495	pcbp3	74	68.016	ENSAPEG00000005209	-	92	68.016	Amphiprion_percula
ENSEBUG00000005495	pcbp3	68	67.470	ENSAPEG00000008011	pcbp3	70	67.470	Amphiprion_percula
ENSEBUG00000005495	pcbp3	74	67.206	ENSATEG00000009833	-	91	67.206	Anabas_testudineus
ENSEBUG00000005495	pcbp3	68	64.659	ENSATEG00000015787	-	74	64.659	Anabas_testudineus
ENSEBUG00000005495	pcbp3	73	58.703	ENSAPLG00000008951	-	81	58.703	Anas_platyrhynchos
ENSEBUG00000005495	pcbp3	73	70.968	ENSAPLG00000002975	-	92	70.968	Anas_platyrhynchos
ENSEBUG00000005495	pcbp3	67	68.548	ENSACAG00000004607	-	93	68.548	Anolis_carolinensis
ENSEBUG00000005495	pcbp3	73	65.169	ENSACAG00000009819	-	91	65.169	Anolis_carolinensis
ENSEBUG00000005495	pcbp3	65	63.514	ENSANAG00000030702	-	91	70.588	Aotus_nancymaae
ENSEBUG00000005495	pcbp3	68	67.068	ENSACLG00000011835	pcbp3	70	67.068	Astatotilapia_calliptera
ENSEBUG00000005495	pcbp3	74	71.255	ENSACLG00000003801	-	92	71.255	Astatotilapia_calliptera
ENSEBUG00000005495	pcbp3	68	71.111	ENSAMXG00000013588	-	72	71.111	Astyanax_mexicanus
ENSEBUG00000005495	pcbp3	67	56.471	ENSAMXG00000001760	zgc:110045	73	56.471	Astyanax_mexicanus
ENSEBUG00000005495	pcbp3	74	64.074	ENSAMXG00000003440	pcbp3	91	64.074	Astyanax_mexicanus
ENSEBUG00000005495	pcbp3	71	73.305	ENSCAFG00020019472	-	83	73.305	Canis_lupus_dingo
ENSEBUG00000005495	pcbp3	73	70.732	ENSCSAG00000007440	-	70	70.732	Chlorocebus_sabaeus
ENSEBUG00000005495	pcbp3	73	64.419	ENSCPBG00000000733	-	65	75.000	Chrysemys_picta_bellii
ENSEBUG00000005495	pcbp3	73	71.138	ENSCPBG00000012151	-	92	75.556	Chrysemys_picta_bellii
ENSEBUG00000005495	pcbp3	69	70.130	ENSCSEG00000000822	pcbp3	90	70.925	Cynoglossus_semilaevis
ENSEBUG00000005495	pcbp3	58	72.821	ENSCSEG00000016984	-	92	60.081	Cynoglossus_semilaevis
ENSEBUG00000005495	pcbp3	74	70.850	ENSCVAG00000005262	-	92	70.850	Cyprinodon_variegatus
ENSEBUG00000005495	pcbp3	68	67.742	ENSCVAG00000014482	pcbp3	70	67.742	Cyprinodon_variegatus
ENSEBUG00000005495	pcbp3	74	64.444	ENSDARG00000054378	pcbp3	92	64.444	Danio_rerio
ENSEBUG00000005495	pcbp3	73	58.537	ENSETEG00000015988	-	92	58.537	Echinops_telfairi
ENSEBUG00000005495	pcbp3	70	71.245	ENSELUG00000003521	pcbp3	72	71.245	Esox_lucius
ENSEBUG00000005495	pcbp3	74	70.445	ENSELUG00000001560	-	92	59.524	Esox_lucius
ENSEBUG00000005495	pcbp3	73	71.429	ENSFALG00000003949	-	92	71.429	Ficedula_albicollis
ENSEBUG00000005495	pcbp3	73	58.503	ENSFALG00000004411	-	76	58.503	Ficedula_albicollis
ENSEBUG00000005495	pcbp3	74	67.206	ENSFHEG00000006539	-	92	67.206	Fundulus_heteroclitus
ENSEBUG00000005495	pcbp3	68	71.556	ENSFHEG00000016615	pcbp3	86	71.556	Fundulus_heteroclitus
ENSEBUG00000005495	pcbp3	70	52.521	ENSGMOG00000008611	-	90	52.521	Gadus_morhua
ENSEBUG00000005495	pcbp3	68	66.222	ENSGMOG00000011992	pcbp3	62	66.222	Gadus_morhua
ENSEBUG00000005495	pcbp3	67	65.992	ENSGALG00000004394	-	91	74.854	Gallus_gallus
ENSEBUG00000005495	pcbp3	73	64.179	ENSGALG00000013155	-	80	61.567	Gallus_gallus
ENSEBUG00000005495	pcbp3	68	61.811	ENSGAFG00000011430	pcbp3	71	61.811	Gambusia_affinis
ENSEBUG00000005495	pcbp3	74	70.850	ENSGAFG00000010274	-	90	70.850	Gambusia_affinis
ENSEBUG00000005495	pcbp3	71	62.357	ENSGACG00000014955	-	71	62.357	Gasterosteus_aculeatus
ENSEBUG00000005495	pcbp3	68	74.336	ENSGACG00000002266	-	85	74.336	Gasterosteus_aculeatus
ENSEBUG00000005495	pcbp3	65	62.844	ENSGAGG00000006956	-	85	62.844	Gopherus_agassizii
ENSEBUG00000005495	pcbp3	63	68.868	ENSGAGG00000000271	-	79	68.868	Gopherus_agassizii
ENSEBUG00000005495	pcbp3	68	70.667	ENSHBUG00000010697	pcbp3	89	70.667	Haplochromis_burtoni
ENSEBUG00000005495	pcbp3	74	71.255	ENSHBUG00000021782	-	92	71.255	Haplochromis_burtoni
ENSEBUG00000005495	pcbp3	75	66.667	ENSHCOG00000006067	-	91	66.667	Hippocampus_comes
ENSEBUG00000005495	pcbp3	68	67.742	ENSHCOG00000017868	pcbp3	71	67.742	Hippocampus_comes
ENSEBUG00000005495	pcbp3	75	66.932	ENSIPUG00000006238	pcbp3	93	66.932	Ictalurus_punctatus
ENSEBUG00000005495	pcbp3	68	67.470	ENSKMAG00000003046	pcbp3	70	67.470	Kryptolebias_marmoratus
ENSEBUG00000005495	pcbp3	74	69.636	ENSKMAG00000018530	-	90	69.636	Kryptolebias_marmoratus
ENSEBUG00000005495	pcbp3	68	70.796	ENSLBEG00000006201	pcbp3	90	70.796	Labrus_bergylta
ENSEBUG00000005495	pcbp3	74	53.785	ENSLBEG00000006542	-	91	54.183	Labrus_bergylta
ENSEBUG00000005495	pcbp3	73	59.589	ENSLACG00000010386	pcbp3	61	59.589	Latimeria_chalumnae
ENSEBUG00000005495	pcbp3	73	59.310	ENSLACG00000010804	zgc:110045	71	59.310	Latimeria_chalumnae
ENSEBUG00000005495	pcbp3	73	63.060	ENSLOCG00000005058	zgc:110045	77	63.060	Lepisosteus_oculatus
ENSEBUG00000005495	pcbp3	67	75.111	ENSLOCG00000009369	pcbp3	85	75.111	Lepisosteus_oculatus
ENSEBUG00000005495	pcbp3	68	71.556	ENSMAMG00000022336	pcbp3	67	71.556	Mastacembelus_armatus
ENSEBUG00000005495	pcbp3	73	67.480	ENSMAMG00000011620	-	91	67.480	Mastacembelus_armatus
ENSEBUG00000005495	pcbp3	76	59.783	ENSMZEG00005008993	pcbp3	92	64.220	Maylandia_zebra
ENSEBUG00000005495	pcbp3	74	61.628	ENSMZEG00005014882	-	87	64.979	Maylandia_zebra
ENSEBUG00000005495	pcbp3	67	62.302	ENSMGAG00000001883	-	70	63.095	Meleagris_gallopavo
ENSEBUG00000005495	pcbp3	73	58.503	ENSMGAG00000006794	-	76	58.503	Meleagris_gallopavo
ENSEBUG00000005495	pcbp3	74	67.206	ENSMMOG00000005216	-	91	67.206	Mola_mola
ENSEBUG00000005495	pcbp3	68	70.485	ENSMMOG00000000730	pcbp3	64	70.485	Mola_mola
ENSEBUG00000005495	pcbp3	52	62.295	ENSMODG00000027884	-	90	62.295	Monodelphis_domestica
ENSEBUG00000005495	pcbp3	67	66.816	ENSMALG00000000691	pcbp3	93	65.438	Monopterus_albus
ENSEBUG00000005495	pcbp3	71	68.085	ENSMPUG00000001779	-	85	68.085	Mustela_putorius_furo
ENSEBUG00000005495	pcbp3	68	64.516	ENSNBRG00000016409	-	70	64.516	Neolamprologus_brichardi
ENSEBUG00000005495	pcbp3	74	62.016	ENSNBRG00000016714	-	89	64.706	Neolamprologus_brichardi
ENSEBUG00000005495	pcbp3	67	65.992	ENSOPRG00000003431	-	96	65.992	Ochotona_princeps
ENSEBUG00000005495	pcbp3	74	71.255	ENSONIG00000004611	-	92	71.255	Oreochromis_niloticus
ENSEBUG00000005495	pcbp3	68	67.339	ENSONIG00000012122	-	68	67.339	Oreochromis_niloticus
ENSEBUG00000005495	pcbp3	73	71.429	ENSOCUG00000002696	-	70	71.429	Oryctolagus_cuniculus
ENSEBUG00000005495	pcbp3	68	74.336	ENSORLG00000000059	pcbp3	95	74.336	Oryzias_latipes
ENSEBUG00000005495	pcbp3	75	69.721	ENSORLG00000022739	-	93	69.721	Oryzias_latipes
ENSEBUG00000005495	pcbp3	68	74.336	ENSORLG00020012671	pcbp3	92	74.336	Oryzias_latipes_hni
ENSEBUG00000005495	pcbp3	75	69.721	ENSORLG00020006124	-	93	69.721	Oryzias_latipes_hni
ENSEBUG00000005495	pcbp3	68	74.336	ENSORLG00015000429	pcbp3	92	74.336	Oryzias_latipes_hsok
ENSEBUG00000005495	pcbp3	75	69.721	ENSORLG00015008051	-	91	69.721	Oryzias_latipes_hsok
ENSEBUG00000005495	pcbp3	65	72.500	ENSOMEG00000020811	pcbp3	93	72.500	Oryzias_melastigma
ENSEBUG00000005495	pcbp3	75	69.841	ENSOMEG00000020162	-	93	69.841	Oryzias_melastigma
ENSEBUG00000005495	pcbp3	69	65.637	ENSOGAG00000008044	-	71	65.637	Otolemur_garnettii
ENSEBUG00000005495	pcbp3	56	68.085	ENSPKIG00000020913	-	80	68.085	Paramormyrops_kingsleyae
ENSEBUG00000005495	pcbp3	74	71.138	ENSPKIG00000019329	pcbp3	90	71.138	Paramormyrops_kingsleyae
ENSEBUG00000005495	pcbp3	81	57.778	ENSPSIG00000014970	-	76	58.889	Pelodiscus_sinensis
ENSEBUG00000005495	pcbp3	68	63.102	ENSPSIG00000008350	-	70	63.102	Pelodiscus_sinensis
ENSEBUG00000005495	pcbp3	68	67.470	ENSPMGG00000022383	pcbp3	71	67.470	Periophthalmus_magnuspinnatus
ENSEBUG00000005495	pcbp3	56	75.532	ENSPMAG00000004637	-	97	75.532	Petromyzon_marinus
ENSEBUG00000005495	pcbp3	70	78.571	ENSPMAG00000004551	pcbp3	68	78.571	Petromyzon_marinus
ENSEBUG00000005495	pcbp3	73	64.684	ENSPCIG00000028092	-	90	75.490	Phascolarctos_cinereus
ENSEBUG00000005495	pcbp3	72	60.755	ENSPLAG00000011449	pcbp3	65	60.755	Poecilia_latipinna
ENSEBUG00000005495	pcbp3	68	72.000	ENSPLAG00000004074	-	81	72.000	Poecilia_latipinna
ENSEBUG00000005495	pcbp3	69	66.942	ENSPMEG00000006653	-	91	65.641	Poecilia_mexicana
ENSEBUG00000005495	pcbp3	68	66.667	ENSPMEG00000021239	pcbp3	96	60.000	Poecilia_mexicana
ENSEBUG00000005495	pcbp3	68	68.860	ENSPREG00000015736	pcbp3	94	68.860	Poecilia_reticulata
ENSEBUG00000005495	pcbp3	74	67.611	ENSPREG00000020585	-	92	74.272	Poecilia_reticulata
ENSEBUG00000005495	pcbp3	74	68.421	ENSPNYG00000013205	-	91	68.421	Pundamilia_nyererei
ENSEBUG00000005495	pcbp3	68	70.354	ENSPNYG00000012326	pcbp3	90	70.354	Pundamilia_nyererei
ENSEBUG00000005495	pcbp3	74	66.397	ENSPNAG00000008541	-	71	70.796	Pygocentrus_nattereri
ENSEBUG00000005495	pcbp3	74	70.040	ENSPNAG00000015104	pcbp3	92	70.040	Pygocentrus_nattereri
ENSEBUG00000005495	pcbp3	73	70.732	ENSRNOG00000001245	Pcbp3	92	70.732	Rattus_norvegicus
ENSEBUG00000005495	pcbp3	73	61.240	ENSRBIG00000028177	-	93	59.073	Rhinopithecus_bieti
ENSEBUG00000005495	pcbp3	67	75.446	ENSSHAG00000007890	-	66	75.446	Sarcophilus_harrisii
ENSEBUG00000005495	pcbp3	70	66.667	ENSSFOG00015014706	pcbp3	71	66.667	Scleropages_formosus
ENSEBUG00000005495	pcbp3	74	70.732	ENSSFOG00015010205	pcbp3	90	70.732	Scleropages_formosus
ENSEBUG00000005495	pcbp3	67	69.507	ENSSFOG00015007118	-	68	69.507	Scleropages_formosus
ENSEBUG00000005495	pcbp3	74	70.850	ENSSMAG00000003135	-	92	70.850	Scophthalmus_maximus
ENSEBUG00000005495	pcbp3	68	71.239	ENSSMAG00000011929	pcbp3	92	71.239	Scophthalmus_maximus
ENSEBUG00000005495	pcbp3	74	63.745	ENSSDUG00000008502	-	90	63.745	Seriola_dumerili
ENSEBUG00000005495	pcbp3	68	64.919	ENSSDUG00000011608	pcbp3	72	64.919	Seriola_dumerili
ENSEBUG00000005495	pcbp3	68	64.919	ENSSLDG00000008518	pcbp3	72	64.919	Seriola_lalandi_dorsalis
ENSEBUG00000005495	pcbp3	74	70.445	ENSSLDG00000020161	-	90	70.445	Seriola_lalandi_dorsalis
ENSEBUG00000005495	pcbp3	73	56.897	ENSSPUG00000013214	-	88	67.857	Sphenodon_punctatus
ENSEBUG00000005495	pcbp3	62	70.874	ENSSPAG00000004190	-	93	70.874	Stegastes_partitus
ENSEBUG00000005495	pcbp3	69	50.980	ENSSPAG00000023341	-	87	52.308	Stegastes_partitus
ENSEBUG00000005495	pcbp3	67	72.889	ENSTGUG00000003316	-	92	72.889	Taeniopygia_guttata
ENSEBUG00000005495	pcbp3	73	69.919	ENSTGUG00000008158	-	92	69.919	Taeniopygia_guttata
ENSEBUG00000005495	pcbp3	68	66.946	ENSTRUG00000013604	pcbp3	83	74.211	Takifugu_rubripes
ENSEBUG00000005495	pcbp3	66	68.636	ENSTRUG00000006280	-	85	68.636	Takifugu_rubripes
ENSEBUG00000005495	pcbp3	67	67.611	ENSTTRG00000015075	-	93	67.611	Tursiops_truncatus
ENSEBUG00000005495	pcbp3	67	76.000	ENSXETG00000011483	pcbp1	66	76.000	Xenopus_tropicalis
ENSEBUG00000005495	pcbp3	64	60.687	ENSXETG00000010491	pcbp2	74	60.687	Xenopus_tropicalis
ENSEBUG00000005495	pcbp3	68	66.667	ENSXCOG00000020481	pcbp3	71	66.667	Xiphophorus_couchianus
ENSEBUG00000005495	pcbp3	68	67.470	ENSXMAG00000008175	pcbp3	70	67.470	Xiphophorus_maculatus
ENSEBUG00000005495	pcbp3	74	70.445	ENSXMAG00000028711	-	90	70.445	Xiphophorus_maculatus