EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 80855 bases
Position: chrFYBX02010287.1:833624-914478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008651	zf-U11-48K	PF05253.12	5.3e-20	1	2
ENSEBUP00000008651	zf-U11-48K	PF05253.12	5.3e-20	2	2
ENSEBUP00000008621	zf-U11-48K	PF05253.12	1.6e-19	1	2
ENSEBUP00000008621	zf-U11-48K	PF05253.12	1.6e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009159	-	1201	-	ENSEBUP00000008651	185 (aa)	-	-
ENSEBUT00000009128	-	2176	-	ENSEBUP00000008621	252 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005577	-	58	45.946	ENSEBUG00000000411	-	66	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005577	-	76	41.096	ENSAPOG00000021951	-	75	41.096	Acanthochromis_polyacanthus
ENSEBUG00000005577	-	59	40.000	ENSAPOG00000000311	-	66	40.000	Acanthochromis_polyacanthus
ENSEBUG00000005577	-	72	36.986	ENSACIG00000013400	zgc:56699	81	36.986	Amphilophus_citrinellus
ENSEBUG00000005577	-	60	45.217	ENSAOCG00000013650	-	78	38.750	Amphiprion_ocellaris
ENSEBUG00000005577	-	64	34.161	ENSAPEG00000006689	zgc:56699	77	38.462	Amphiprion_percula
ENSEBUG00000005577	-	75	42.254	ENSATEG00000024058	zgc:56699	74	42.254	Anabas_testudineus
ENSEBUG00000005577	-	75	40.690	ENSACLG00000023562	zgc:56699	71	40.690	Astatotilapia_calliptera
ENSEBUG00000005577	-	61	46.552	ENSAMXG00000038346	zgc:56699	63	46.552	Astyanax_mexicanus
ENSEBUG00000005577	-	77	37.415	ENSCSEG00000021520	zgc:56699	68	37.415	Cynoglossus_semilaevis
ENSEBUG00000005577	-	54	41.000	ENSCVAG00000009972	zgc:56699	55	41.000	Cyprinodon_variegatus
ENSEBUG00000005577	-	59	41.880	ENSDARG00000099586	CR382383.2	64	41.880	Danio_rerio
ENSEBUG00000005577	-	62	44.915	ENSDARG00000000887	zgc:56699	63	45.299	Danio_rerio
ENSEBUG00000005577	-	60	45.690	ENSELUG00000003242	gtsf1	62	45.690	Esox_lucius
ENSEBUG00000005577	-	62	42.609	ENSFHEG00000006036	zgc:56699	61	42.857	Fundulus_heteroclitus
ENSEBUG00000005577	-	56	37.615	ENSGMOG00000007295	zgc:56699	88	37.615	Gadus_morhua
ENSEBUG00000005577	-	62	45.000	ENSGAFG00000020743	zgc:56699	64	45.000	Gambusia_affinis
ENSEBUG00000005577	-	75	40.690	ENSHBUG00000005327	zgc:56699	78	40.690	Haplochromis_burtoni
ENSEBUG00000005577	-	62	40.000	ENSHCOG00000010296	-	65	40.000	Hippocampus_comes
ENSEBUG00000005577	-	62	35.714	ENSIPUG00000011498	zgc:56699	62	35.714	Ictalurus_punctatus
ENSEBUG00000005577	-	62	45.763	ENSLBEG00000015981	zgc:56699	79	42.105	Labrus_bergylta
ENSEBUG00000005577	-	61	38.261	ENSLOCG00000004469	zgc:56699	78	38.793	Lepisosteus_oculatus
ENSEBUG00000005577	-	62	45.763	ENSMAMG00000001846	zgc:56699	65	45.763	Mastacembelus_armatus
ENSEBUG00000005577	-	75	40.690	ENSMZEG00005026479	zgc:56699	71	40.690	Maylandia_zebra
ENSEBUG00000005577	-	57	42.453	ENSMMOG00000017331	zgc:56699	57	42.453	Mola_mola
ENSEBUG00000005577	-	75	41.379	ENSNBRG00000006336	zgc:56699	78	41.379	Neolamprologus_brichardi
ENSEBUG00000005577	-	75	40.000	ENSONIG00000016720	zgc:56699	71	40.000	Oreochromis_niloticus
ENSEBUG00000005577	-	79	33.775	ENSOANG00000030381	-	99	33.775	Ornithorhynchus_anatinus
ENSEBUG00000005577	-	62	41.026	ENSORLG00000025877	-	70	41.026	Oryzias_latipes
ENSEBUG00000005577	-	60	44.643	ENSORLG00000015258	-	64	44.643	Oryzias_latipes
ENSEBUG00000005577	-	60	44.643	ENSORLG00020010990	-	64	44.643	Oryzias_latipes_hni
ENSEBUG00000005577	-	62	41.026	ENSORLG00020011013	-	70	41.026	Oryzias_latipes_hni
ENSEBUG00000005577	-	60	44.643	ENSORLG00015004961	zgc:56699	64	44.643	Oryzias_latipes_hsok
ENSEBUG00000005577	-	71	40.580	ENSOMEG00000021739	-	77	40.580	Oryzias_melastigma
ENSEBUG00000005577	-	75	38.028	ENSOMEG00000013200	-	88	38.028	Oryzias_melastigma
ENSEBUG00000005577	-	70	38.636	ENSOMEG00000021773	-	72	38.636	Oryzias_melastigma
ENSEBUG00000005577	-	66	40.945	ENSPKIG00000017039	zgc:56699	69	40.945	Paramormyrops_kingsleyae
ENSEBUG00000005577	-	59	43.697	ENSPMGG00000023241	zgc:56699	66	43.697	Periophthalmus_magnuspinnatus
ENSEBUG00000005577	-	63	40.945	ENSPMAG00000009653	-	98	40.945	Petromyzon_marinus
ENSEBUG00000005577	-	60	46.154	ENSPFOG00000009204	zgc:56699	63	46.154	Poecilia_formosa
ENSEBUG00000005577	-	60	44.144	ENSPLAG00000009088	zgc:56699	62	45.045	Poecilia_latipinna
ENSEBUG00000005577	-	60	46.154	ENSPMEG00000001443	zgc:56699	63	46.154	Poecilia_mexicana
ENSEBUG00000005577	-	62	45.000	ENSPREG00000000745	zgc:56699	64	45.000	Poecilia_reticulata
ENSEBUG00000005577	-	75	40.690	ENSPNYG00000002811	zgc:56699	78	40.690	Pundamilia_nyererei
ENSEBUG00000005577	-	61	44.828	ENSPNAG00000005165	zgc:56699	62	44.828	Pygocentrus_nattereri
ENSEBUG00000005577	-	60	45.217	ENSSFOG00015021600	zgc:56699	62	45.217	Scleropages_formosus
ENSEBUG00000005577	-	63	45.378	ENSSMAG00000020886	zgc:56699	66	45.763	Scophthalmus_maximus
ENSEBUG00000005577	-	62	45.378	ENSSDUG00000002033	zgc:56699	64	48.485	Seriola_dumerili
ENSEBUG00000005577	-	62	44.538	ENSSLDG00000014113	zgc:56699	64	47.475	Seriola_lalandi_dorsalis
ENSEBUG00000005577	-	60	45.217	ENSSPAG00000019854	-	66	45.690	Stegastes_partitus
ENSEBUG00000005577	-	62	41.322	ENSSPAG00000010005	-	75	41.322	Stegastes_partitus
ENSEBUG00000005577	-	70	38.060	ENSTRUG00000015537	zgc:56699	73	38.060	Takifugu_rubripes
ENSEBUG00000005577	-	76	40.278	ENSTNIG00000012515	zgc:56699	95	40.278	Tetraodon_nigroviridis
ENSEBUG00000005577	-	57	45.455	ENSXCOG00000014400	zgc:56699	57	45.455	Xiphophorus_couchianus
ENSEBUG00000005577	-	62	45.000	ENSXMAG00000011692	zgc:56699	64	45.000	Xiphophorus_maculatus