EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005581 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 10117 bases
Position: chrFYBX02010423.1:1080869-1090985
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008625	MRP-S32	PF10210.9	6.2e-27	1	1
ENSEBUP00000008634	MRP-S32	PF10210.9	6.2e-27	1	1
ENSEBUP00000008646	MRP-S32	PF10210.9	6.2e-27	1	1
ENSEBUP00000008669	MRP-S32	PF10210.9	6.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009177	-	2305	-	ENSEBUP00000008669	134 (aa)	-	-
ENSEBUT00000009132	-	1703	-	ENSEBUP00000008625	134 (aa)	-	-
ENSEBUT00000009156	-	1703	-	ENSEBUP00000008646	134 (aa)	-	-
ENSEBUT00000009142	-	1703	-	ENSEBUP00000008634	134 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005581	mrpl42	89	46.667	ENSAPOG00000010677	mrpl42	78	46.667	Acanthochromis_polyacanthus
ENSEBUG00000005581	mrpl42	89	47.899	ENSAOCG00000011620	mrpl42	78	47.899	Amphiprion_ocellaris
ENSEBUG00000005581	mrpl42	89	47.899	ENSAPEG00000019516	mrpl42	78	47.899	Amphiprion_percula
ENSEBUG00000005581	mrpl42	78	44.340	ENSATEG00000014106	mrpl42	76	44.340	Anabas_testudineus
ENSEBUG00000005581	mrpl42	87	52.586	ENSACAG00000012606	MRPL42	75	52.586	Anolis_carolinensis
ENSEBUG00000005581	mrpl42	81	45.370	ENSACLG00000026856	mrpl42	70	45.370	Astatotilapia_calliptera
ENSEBUG00000005581	mrpl42	86	37.391	ENSAMXG00000035149	mrpl42	80	37.391	Astyanax_mexicanus
ENSEBUG00000005581	mrpl42	77	44.660	ENSCSEG00000010067	mrpl42	69	44.660	Cynoglossus_semilaevis
ENSEBUG00000005581	mrpl42	81	48.624	ENSCVAG00000002612	mrpl42	71	48.624	Cyprinodon_variegatus
ENSEBUG00000005581	mrpl42	78	43.810	ENSDARG00000079391	mrpl42	69	43.810	Danio_rerio
ENSEBUG00000005581	mrpl42	78	50.476	ENSELUG00000001973	mrpl42	69	50.476	Esox_lucius
ENSEBUG00000005581	mrpl42	81	47.706	ENSFHEG00000018696	mrpl42	71	47.706	Fundulus_heteroclitus
ENSEBUG00000005581	mrpl42	77	49.515	ENSGMOG00000002972	mrpl42	100	49.515	Gadus_morhua
ENSEBUG00000005581	mrpl42	82	48.182	ENSGAFG00000018373	mrpl42	72	48.182	Gambusia_affinis
ENSEBUG00000005581	mrpl42	76	48.039	ENSGACG00000018811	mrpl42	99	48.039	Gasterosteus_aculeatus
ENSEBUG00000005581	mrpl42	81	44.444	ENSHBUG00000015960	mrpl42	70	44.444	Haplochromis_burtoni
ENSEBUG00000005581	mrpl42	76	46.078	ENSHCOG00000014046	mrpl42	67	46.078	Hippocampus_comes
ENSEBUG00000005581	mrpl42	92	41.129	ENSIPUG00000015395	mrpl42	80	41.129	Ictalurus_punctatus
ENSEBUG00000005581	mrpl42	89	43.697	ENSKMAG00000013671	mrpl42	78	43.697	Kryptolebias_marmoratus
ENSEBUG00000005581	mrpl42	78	50.476	ENSLBEG00000028618	mrpl42	67	50.476	Labrus_bergylta
ENSEBUG00000005581	mrpl42	56	42.667	ENSLOCG00000015284	mrpl42	55	42.667	Lepisosteus_oculatus
ENSEBUG00000005581	mrpl42	89	49.580	ENSMAMG00000009737	mrpl42	78	49.580	Mastacembelus_armatus
ENSEBUG00000005581	mrpl42	81	45.370	ENSMZEG00005008545	mrpl42	67	45.370	Maylandia_zebra
ENSEBUG00000005581	mrpl42	70	38.298	ENSMMOG00000002317	mrpl42	58	38.298	Mola_mola
ENSEBUG00000005581	mrpl42	81	49.091	ENSMALG00000015794	mrpl42	63	49.091	Monopterus_albus
ENSEBUG00000005581	mrpl42	88	43.697	ENSNBRG00000003307	mrpl42	78	43.697	Neolamprologus_brichardi
ENSEBUG00000005581	mrpl42	81	44.444	ENSONIG00000011753	mrpl42	70	44.444	Oreochromis_niloticus
ENSEBUG00000005581	mrpl42	87	55.556	ENSOANG00000019984	-	76	55.556	Ornithorhynchus_anatinus
ENSEBUG00000005581	mrpl42	78	45.714	ENSORLG00000013500	mrpl42	58	45.714	Oryzias_latipes
ENSEBUG00000005581	mrpl42	78	45.714	ENSORLG00020000548	mrpl42	68	45.714	Oryzias_latipes_hni
ENSEBUG00000005581	mrpl42	76	48.039	ENSORLG00015016984	mrpl42	66	47.059	Oryzias_latipes_hsok
ENSEBUG00000005581	mrpl42	89	45.833	ENSOMEG00000010700	mrpl42	79	45.833	Oryzias_melastigma
ENSEBUG00000005581	mrpl42	81	49.074	ENSPKIG00000025457	mrpl42	70	49.074	Paramormyrops_kingsleyae
ENSEBUG00000005581	mrpl42	95	39.568	ENSPMGG00000019705	mrpl42	94	39.568	Periophthalmus_magnuspinnatus
ENSEBUG00000005581	mrpl42	87	52.137	ENSPMAG00000008091	mrpl42	74	52.137	Petromyzon_marinus
ENSEBUG00000005581	mrpl42	89	45.833	ENSPFOG00000016539	mrpl42	78	45.833	Poecilia_formosa
ENSEBUG00000005581	mrpl42	89	46.667	ENSPLAG00000001255	mrpl42	79	46.667	Poecilia_latipinna
ENSEBUG00000005581	mrpl42	82	47.273	ENSPMEG00000016462	mrpl42	72	47.273	Poecilia_mexicana
ENSEBUG00000005581	mrpl42	82	46.364	ENSPREG00000012053	mrpl42	76	46.364	Poecilia_reticulata
ENSEBUG00000005581	mrpl42	81	45.370	ENSPNYG00000009586	mrpl42	70	45.370	Pundamilia_nyererei
ENSEBUG00000005581	mrpl42	86	40.000	ENSPNAG00000020753	mrpl42	75	40.000	Pygocentrus_nattereri
ENSEBUG00000005581	mrpl42	78	49.524	ENSSMAG00000000262	mrpl42	68	49.524	Scophthalmus_maximus
ENSEBUG00000005581	mrpl42	78	48.571	ENSSDUG00000005949	mrpl42	68	48.571	Seriola_dumerili
ENSEBUG00000005581	mrpl42	81	48.148	ENSSLDG00000010159	mrpl42	70	48.148	Seriola_lalandi_dorsalis
ENSEBUG00000005581	mrpl42	81	45.370	ENSTRUG00000025949	mrpl42	69	45.370	Takifugu_rubripes
ENSEBUG00000005581	mrpl42	87	50.427	ENSXETG00000032902	mrpl42	89	50.427	Xenopus_tropicalis
ENSEBUG00000005581	mrpl42	80	46.729	ENSXCOG00000013875	mrpl42	78	46.729	Xiphophorus_couchianus