EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005588 (Gene tree)
Gene ID: -
Gene Symbol: srsf4 (1 of many)
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 17284 bases
Position: chrFYBX02009839.1:4448259-4465542
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008665	RRM_1	PF00076.22	6.2e-30	1	2
ENSEBUP00000008665	RRM_1	PF00076.22	6.2e-30	2	2
ENSEBUP00000008637	RRM_1	PF00076.22	6.3e-30	1	2
ENSEBUP00000008637	RRM_1	PF00076.22	6.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009146	-	2664	-	ENSEBUP00000008637	375 (aa)	-	-
ENSEBUT00000009173	-	1125	-	ENSEBUP00000008665	374 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005588	srsf4	66	51.172	ENSACLG00000003395	srsf4	73	63.731	Astatotilapia_calliptera
ENSEBUG00000005588	srsf4	67	50.787	ENSAMXG00000034811	srsf4	77	57.653	Astyanax_mexicanus
ENSEBUG00000005588	srsf4	67	54.231	ENSCHIG00000022096	SRSF4	52	55.556	Capra_hircus
ENSEBUG00000005588	srsf4	69	51.527	ENSHCOG00000012540	srsf4	73	60.101	Hippocampus_comes
ENSEBUG00000005588	srsf4	53	57.789	ENSKMAG00000013631	srsf4	87	54.054	Kryptolebias_marmoratus
ENSEBUG00000005588	srsf4	50	57.436	ENSLOCG00000001442	-	54	58.586	Lepisosteus_oculatus
ENSEBUG00000005588	srsf4	66	51.172	ENSMZEG00005026275	srsf4	73	63.731	Maylandia_zebra
ENSEBUG00000005588	srsf4	59	53.778	ENSORLG00020016052	srsf4	100	52.431	Oryzias_latipes_hni
ENSEBUG00000005588	srsf4	65	47.984	ENSPLAG00000008812	srsf4	70	57.868	Poecilia_latipinna
ENSEBUG00000005588	srsf4	87	47.181	ENSPREG00000009639	srsf4	89	47.188	Poecilia_reticulata
ENSEBUG00000005588	srsf4	67	51.908	ENSSPAG00000014538	srsf4	83	64.167	Stegastes_partitus
ENSEBUG00000005588	srsf4	52	61.421	ENSTNIG00000000115	-	52	58.937	Tetraodon_nigroviridis