EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005611 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 142747 bases
Position: chrFYBX02010571.1:1994485-2137231
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008681	GatB_Yqey	PF02637.18	6.6e-37	1	1
ENSEBUP00000008695	GatB_Yqey	PF02637.18	6.6e-37	1	1
ENSEBUP00000008708	GatB_Yqey	PF02637.18	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009190	-	4275	-	ENSEBUP00000008681	262 (aa)	-	-
ENSEBUT00000009202	-	3105	-	ENSEBUP00000008695	262 (aa)	-	-
ENSEBUT00000009217	-	1232	-	ENSEBUP00000008708	248 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005611	-	95	42.000	ENSG00000059691	GATB	81	42.991	Homo_sapiens
ENSEBUG00000005611	-	95	44.400	ENSACIG00000015827	gatb	56	44.400	Amphilophus_citrinellus
ENSEBUG00000005611	-	95	46.825	ENSACLG00000026091	gatb	51	46.825	Astatotilapia_calliptera
ENSEBUG00000005611	-	94	41.700	ENSCAPG00000010977	GATB	51	41.700	Cavia_aperea
ENSEBUG00000005611	-	95	46.215	ENSCSEG00000004009	gatb	57	45.817	Cynoglossus_semilaevis
ENSEBUG00000005611	-	95	47.809	ENSCVAG00000017180	gatb	50	47.809	Cyprinodon_variegatus
ENSEBUG00000005611	-	89	42.979	ENSFALG00000002209	GATB	52	42.979	Ficedula_albicollis
ENSEBUG00000005611	-	93	48.374	ENSGMOG00000001575	gatb	50	48.374	Gadus_morhua
ENSEBUG00000005611	-	95	46.640	ENSGACG00000017143	gatb	51	46.640	Gasterosteus_aculeatus
ENSEBUG00000005611	-	95	46.429	ENSNBRG00000005947	gatb	57	46.429	Neolamprologus_brichardi
ENSEBUG00000005611	-	95	43.028	ENSOANG00000005282	GATB	57	43.028	Ornithorhynchus_anatinus
ENSEBUG00000005611	-	95	41.600	ENSPCOG00000021777	GATB	50	41.600	Propithecus_coquereli
ENSEBUG00000005611	-	95	47.809	ENSSPAG00000014465	gatb	50	47.809	Stegastes_partitus
ENSEBUG00000005611	-	95	42.800	ENSSSCG00000009015	GATB	57	42.800	Sus_scrofa
ENSEBUG00000005611	-	95	46.825	ENSTNIG00000003378	gatb	61	46.825	Tetraodon_nigroviridis
ENSEBUG00000005611	-	94	41.463	ENSUMAG00000016157	GATB	51	35.417	Ursus_maritimus
ENSEBUG00000005611	-	95	46.614	ENSXETG00000034167	GATB	50	46.614	Xenopus_tropicalis
ENSEBUG00000005611	-	95	48.000	ENSXMAG00000008071	gatb	53	48.000	Xiphophorus_maculatus