EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005735 (Gene tree)
Gene ID: -
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain%2C bifurcated 1b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 123094 bases
Position: chrFYBX02010717.1:3560833-3683926
Accession: ZDB-GENE-061013-224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000008862	MBD	PF01429.19	6.3e-10	1	1
ENSEBUP00000008897	MBD	PF01429.19	7.9e-10	1	1
ENSEBUP00000008940	MBD	PF01429.19	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009411	-	3935	-	ENSEBUP00000008897	954 (aa)	-	-
ENSEBUT00000009374	-	3029	-	ENSEBUP00000008862	973 (aa)	-	-
ENSEBUT00000009453	-	3935	-	ENSEBUP00000008940	954 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005735	setdb1b	95	46.755	ENSG00000143379	SETDB1	70	47.697	Homo_sapiens
ENSEBUG00000005735	setdb1b	76	49.332	ENSAPOG00000016228	setdb1b	68	46.025	Acanthochromis_polyacanthus
ENSEBUG00000005735	setdb1b	95	46.497	ENSAMEG00000001160	SETDB1	70	47.065	Ailuropoda_melanoleuca
ENSEBUG00000005735	setdb1b	74	60.526	ENSACIG00000007359	setdb1b	67	46.937	Amphilophus_citrinellus
ENSEBUG00000005735	setdb1b	61	64.265	ENSAOCG00000005586	setdb1b	69	46.514	Amphiprion_ocellaris
ENSEBUG00000005735	setdb1b	76	50.000	ENSAPEG00000007774	setdb1b	69	46.659	Amphiprion_percula
ENSEBUG00000005735	setdb1b	74	60.938	ENSATEG00000023520	setdb1b	68	46.921	Anabas_testudineus
ENSEBUG00000005735	setdb1b	95	47.326	ENSAPLG00000013908	SETDB1	71	46.774	Anas_platyrhynchos
ENSEBUG00000005735	setdb1b	95	47.347	ENSANAG00000001819	SETDB1	71	47.282	Aotus_nancymaae
ENSEBUG00000005735	setdb1b	74	61.053	ENSACLG00000020489	setdb1b	68	46.753	Astatotilapia_calliptera
ENSEBUG00000005735	setdb1b	88	47.217	ENSAMXG00000016168	setdb1b	64	47.038	Astyanax_mexicanus
ENSEBUG00000005735	setdb1b	95	46.341	ENSBTAG00000000098	SETDB1	70	46.564	Bos_taurus
ENSEBUG00000005735	setdb1b	95	47.183	ENSCJAG00000006972	SETDB1	71	47.561	Callithrix_jacchus
ENSEBUG00000005735	setdb1b	95	47.166	ENSCAFG00000023501	SETDB1	82	47.556	Canis_familiaris
ENSEBUG00000005735	setdb1b	95	49.242	ENSCAFG00020013596	SETDB1	71	47.234	Canis_lupus_dingo
ENSEBUG00000005735	setdb1b	95	46.389	ENSCHIG00000010698	SETDB1	71	46.769	Capra_hircus
ENSEBUG00000005735	setdb1b	67	48.939	ENSTSYG00000012646	SETDB1	58	50.077	Carlito_syrichta
ENSEBUG00000005735	setdb1b	75	45.000	ENSCAPG00000013619	SETDB1	73	43.797	Cavia_aperea
ENSEBUG00000005735	setdb1b	95	46.673	ENSCPOG00000001632	SETDB1	70	47.166	Cavia_porcellus
ENSEBUG00000005735	setdb1b	95	47.197	ENSCCAG00000024882	SETDB1	71	47.477	Cebus_capucinus
ENSEBUG00000005735	setdb1b	82	49.304	ENSCATG00000044888	SETDB1	71	46.249	Cercocebus_atys
ENSEBUG00000005735	setdb1b	95	46.538	ENSCLAG00000000242	SETDB1	71	47.639	Chinchilla_lanigera
ENSEBUG00000005735	setdb1b	95	47.059	ENSCSAG00000018034	SETDB1	80	47.639	Chlorocebus_sabaeus
ENSEBUG00000005735	setdb1b	83	70.968	ENSCHOG00000004013	SETDB1	58	70.968	Choloepus_hoffmanni
ENSEBUG00000005735	setdb1b	95	47.853	ENSCPBG00000008716	SETDB1	70	47.137	Chrysemys_picta_bellii
ENSEBUG00000005735	setdb1b	75	51.605	ENSCANG00000036388	SETDB1	63	51.365	Colobus_angolensis_palliatus
ENSEBUG00000005735	setdb1b	95	47.609	ENSCGRG00001010822	Setdb1	70	47.915	Cricetulus_griseus_chok1gshd
ENSEBUG00000005735	setdb1b	95	47.609	ENSCGRG00000005953	Setdb1	70	47.915	Cricetulus_griseus_crigri
ENSEBUG00000005735	setdb1b	74	61.702	ENSCSEG00000002988	setdb1b	69	47.116	Cynoglossus_semilaevis
ENSEBUG00000005735	setdb1b	95	46.088	ENSCVAG00000008877	setdb1b	68	47.919	Cyprinodon_variegatus
ENSEBUG00000005735	setdb1b	95	43.059	ENSDARG00000099021	setdb1b	67	46.774	Danio_rerio
ENSEBUG00000005735	setdb1b	95	47.262	ENSDNOG00000007754	SETDB1	70	47.840	Dasypus_novemcinctus
ENSEBUG00000005735	setdb1b	95	47.023	ENSDORG00000006830	Setdb1	72	46.593	Dipodomys_ordii
ENSEBUG00000005735	setdb1b	95	46.566	ENSEASG00005002061	SETDB1	71	46.653	Equus_asinus_asinus
ENSEBUG00000005735	setdb1b	95	46.411	ENSECAG00000023954	SETDB1	71	46.450	Equus_caballus
ENSEBUG00000005735	setdb1b	69	64.894	ENSEEUG00000015825	SETDB1	50	58.333	Erinaceus_europaeus
ENSEBUG00000005735	setdb1b	74	62.766	ENSELUG00000013948	setdb1b	69	45.593	Esox_lucius
ENSEBUG00000005735	setdb1b	95	44.343	ENSFCAG00000009655	SETDB1	70	45.138	Felis_catus
ENSEBUG00000005735	setdb1b	95	46.450	ENSFDAG00000021515	SETDB1	70	47.191	Fukomys_damarensis
ENSEBUG00000005735	setdb1b	84	52.952	ENSFHEG00000022195	setdb1b	68	47.284	Fundulus_heteroclitus
ENSEBUG00000005735	setdb1b	80	53.333	ENSGMOG00000005993	setdb1b	67	51.456	Gadus_morhua
ENSEBUG00000005735	setdb1b	95	48.898	ENSGALG00000024051	SETDB1	63	48.424	Gallus_gallus
ENSEBUG00000005735	setdb1b	91	43.552	ENSGAFG00000012805	setdb1b	68	45.881	Gambusia_affinis
ENSEBUG00000005735	setdb1b	74	50.138	ENSGACG00000011675	setdb1b	63	60.638	Gasterosteus_aculeatus
ENSEBUG00000005735	setdb1b	95	47.866	ENSGAGG00000005348	SETDB1	70	47.239	Gopherus_agassizii
ENSEBUG00000005735	setdb1b	95	47.363	ENSGGOG00000016308	SETDB1	71	47.492	Gorilla_gorilla
ENSEBUG00000005735	setdb1b	74	61.053	ENSHBUG00000004618	setdb1b	68	46.753	Haplochromis_burtoni
ENSEBUG00000005735	setdb1b	95	47.154	ENSHGLG00000011098	SETDB1	71	47.023	Heterocephalus_glaber_female
ENSEBUG00000005735	setdb1b	95	47.125	ENSHGLG00100009789	SETDB1	70	47.718	Heterocephalus_glaber_male
ENSEBUG00000005735	setdb1b	95	46.368	ENSHCOG00000014567	setdb1b	67	47.040	Hippocampus_comes
ENSEBUG00000005735	setdb1b	95	46.482	ENSIPUG00000004536	setdb1	73	47.021	Ictalurus_punctatus
ENSEBUG00000005735	setdb1b	95	45.933	ENSSTOG00000006770	SETDB1	71	46.454	Ictidomys_tridecemlineatus
ENSEBUG00000005735	setdb1b	63	67.901	ENSKMAG00000001197	setdb1b	69	45.764	Kryptolebias_marmoratus
ENSEBUG00000005735	setdb1b	54	67.593	ENSLBEG00000025862	setdb1b	68	45.494	Labrus_bergylta
ENSEBUG00000005735	setdb1b	95	44.643	ENSLACG00000011159	SETDB1	71	45.783	Latimeria_chalumnae
ENSEBUG00000005735	setdb1b	95	46.139	ENSLAFG00000004006	SETDB1	71	46.317	Loxodonta_africana
ENSEBUG00000005735	setdb1b	95	46.856	ENSMFAG00000042328	SETDB1	70	47.844	Macaca_fascicularis
ENSEBUG00000005735	setdb1b	95	47.658	ENSMMUG00000023235	SETDB1	71	47.331	Macaca_mulatta
ENSEBUG00000005735	setdb1b	95	47.566	ENSMNEG00000017223	SETDB1	70	47.947	Macaca_nemestrina
ENSEBUG00000005735	setdb1b	95	46.856	ENSMLEG00000033050	SETDB1	70	47.844	Mandrillus_leucophaeus
ENSEBUG00000005735	setdb1b	74	60.000	ENSMAMG00000015176	setdb1b	59	46.417	Mastacembelus_armatus
ENSEBUG00000005735	setdb1b	74	61.053	ENSMZEG00005016099	setdb1b	68	46.753	Maylandia_zebra
ENSEBUG00000005735	setdb1b	77	43.348	ENSMGAG00000001018	SETDB1	64	42.796	Meleagris_gallopavo
ENSEBUG00000005735	setdb1b	95	47.551	ENSMAUG00000021391	Setdb1	82	48.061	Mesocricetus_auratus
ENSEBUG00000005735	setdb1b	95	46.720	ENSMICG00000000425	SETDB1	71	46.872	Microcebus_murinus
ENSEBUG00000005735	setdb1b	95	47.590	ENSMOCG00000017407	Setdb1	70	48.308	Microtus_ochrogaster
ENSEBUG00000005735	setdb1b	74	59.043	ENSMMOG00000016162	setdb1b	67	45.186	Mola_mola
ENSEBUG00000005735	setdb1b	94	47.374	ENSMODG00000018821	SETDB1	63	46.930	Monodelphis_domestica
ENSEBUG00000005735	setdb1b	57	62.994	ENSMALG00000007801	setdb1b	65	46.374	Monopterus_albus
ENSEBUG00000005735	setdb1b	95	46.192	MGP_CAROLIEiJ_G0025342	Setdb1	71	47.379	Mus_caroli
ENSEBUG00000005735	setdb1b	95	45.900	ENSMUSG00000015697	Setdb1	71	47.236	Mus_musculus
ENSEBUG00000005735	setdb1b	97	46.038	ENSMPUG00000004298	SETDB1	71	46.533	Mustela_putorius_furo
ENSEBUG00000005735	setdb1b	95	45.954	ENSMLUG00000010486	SETDB1	71	47.586	Myotis_lucifugus
ENSEBUG00000005735	setdb1b	81	53.125	ENSNGAG00000020151	Setdb1	69	46.804	Nannospalax_galili
ENSEBUG00000005735	setdb1b	74	61.053	ENSNBRG00000003147	setdb1b	67	46.878	Neolamprologus_brichardi
ENSEBUG00000005735	setdb1b	95	45.345	ENSNLEG00000009996	SETDB1	70	45.455	Nomascus_leucogenys
ENSEBUG00000005735	setdb1b	75	50.322	ENSMEUG00000006544	-	58	50.521	Notamacropus_eugenii
ENSEBUG00000005735	setdb1b	95	46.289	ENSMEUG00000000555	-	71	45.566	Notamacropus_eugenii
ENSEBUG00000005735	setdb1b	91	44.952	ENSOPRG00000015349	SETDB1	69	45.638	Ochotona_princeps
ENSEBUG00000005735	setdb1b	95	46.334	ENSODEG00000012471	SETDB1	70	47.023	Octodon_degus
ENSEBUG00000005735	setdb1b	74	61.053	ENSONIG00000006454	setdb1b	68	46.861	Oreochromis_niloticus
ENSEBUG00000005735	setdb1b	95	47.089	ENSOCUG00000003642	SETDB1	71	47.222	Oryctolagus_cuniculus
ENSEBUG00000005735	setdb1b	74	58.639	ENSORLG00000010602	setdb1b	68	46.489	Oryzias_latipes
ENSEBUG00000005735	setdb1b	74	57.868	ENSORLG00015014543	setdb1b	68	46.267	Oryzias_latipes_hsok
ENSEBUG00000005735	setdb1b	95	42.982	ENSOMEG00000009457	setdb1b	68	47.537	Oryzias_melastigma
ENSEBUG00000005735	setdb1b	95	46.509	ENSOGAG00000010320	SETDB1	70	46.673	Otolemur_garnettii
ENSEBUG00000005735	setdb1b	95	46.389	ENSOARG00000020880	SETDB1	70	46.564	Ovis_aries
ENSEBUG00000005735	setdb1b	95	47.363	ENSPPAG00000041015	SETDB1	71	47.492	Pan_paniscus
ENSEBUG00000005735	setdb1b	95	45.982	ENSPPRG00000005462	SETDB1	70	47.119	Panthera_pardus
ENSEBUG00000005735	setdb1b	95	46.490	ENSPTIG00000014233	SETDB1	70	47.119	Panthera_tigris_altaica
ENSEBUG00000005735	setdb1b	95	47.363	ENSPTRG00000001267	SETDB1	71	47.492	Pan_troglodytes
ENSEBUG00000005735	setdb1b	95	45.056	ENSPANG00000020214	SETDB1	70	45.175	Papio_anubis
ENSEBUG00000005735	setdb1b	95	45.226	ENSPKIG00000010963	setdb1b	69	46.499	Paramormyrops_kingsleyae
ENSEBUG00000005735	setdb1b	75	50.710	ENSPSIG00000008407	SETDB1	86	50.452	Pelodiscus_sinensis
ENSEBUG00000005735	setdb1b	95	47.503	ENSPEMG00000010553	Setdb1	75	48.110	Peromyscus_maniculatus_bairdii
ENSEBUG00000005735	setdb1b	95	48.776	ENSPMAG00000001573	setdb1b	71	48.728	Petromyzon_marinus
ENSEBUG00000005735	setdb1b	95	43.291	ENSPFOG00000004429	setdb1b	66	47.562	Poecilia_formosa
ENSEBUG00000005735	setdb1b	74	60.638	ENSPFOG00000004623	-	51	61.170	Poecilia_formosa
ENSEBUG00000005735	setdb1b	95	45.557	ENSPLAG00000019076	-	68	47.028	Poecilia_latipinna
ENSEBUG00000005735	setdb1b	89	43.783	ENSPLAG00000017117	setdb1b	67	45.277	Poecilia_latipinna
ENSEBUG00000005735	setdb1b	95	45.418	ENSPMEG00000006468	setdb1b	68	47.363	Poecilia_mexicana
ENSEBUG00000005735	setdb1b	95	45.279	ENSPREG00000017459	setdb1b	68	47.257	Poecilia_reticulata
ENSEBUG00000005735	setdb1b	95	46.755	ENSPPYG00000000887	SETDB1	70	47.234	Pongo_abelii
ENSEBUG00000005735	setdb1b	70	47.246	ENSPCAG00000002527	SETDB1	58	48.551	Procavia_capensis
ENSEBUG00000005735	setdb1b	95	46.505	ENSPCOG00000027869	SETDB1	71	47.035	Propithecus_coquereli
ENSEBUG00000005735	setdb1b	81	53.393	ENSPVAG00000004355	SETDB1	54	55.351	Pteropus_vampyrus
ENSEBUG00000005735	setdb1b	74	61.053	ENSPNYG00000003997	setdb1b	53	51.124	Pundamilia_nyererei
ENSEBUG00000005735	setdb1b	85	55.172	ENSPNAG00000021617	setdb1b	67	46.436	Pygocentrus_nattereri
ENSEBUG00000005735	setdb1b	95	46.881	ENSRNOG00000021143	Setdb1	71	47.219	Rattus_norvegicus
ENSEBUG00000005735	setdb1b	95	47.059	ENSRBIG00000042359	SETDB1	70	48.049	Rhinopithecus_bieti
ENSEBUG00000005735	setdb1b	95	47.465	ENSRROG00000032628	SETDB1	71	47.844	Rhinopithecus_roxellana
ENSEBUG00000005735	setdb1b	95	47.326	ENSSBOG00000028608	SETDB1	71	47.459	Saimiri_boliviensis_boliviensis
ENSEBUG00000005735	setdb1b	95	46.885	ENSSHAG00000012701	SETDB1	71	45.720	Sarcophilus_harrisii
ENSEBUG00000005735	setdb1b	74	62.234	ENSSFOG00015022183	setdb1	69	47.330	Scleropages_formosus
ENSEBUG00000005735	setdb1b	62	59.278	ENSSMAG00000015398	setdb1b	69	45.794	Scophthalmus_maximus
ENSEBUG00000005735	setdb1b	74	62.234	ENSSDUG00000007513	setdb1b	68	46.331	Seriola_dumerili
ENSEBUG00000005735	setdb1b	74	60.638	ENSSLDG00000015209	setdb1b	68	46.341	Seriola_lalandi_dorsalis
ENSEBUG00000005735	setdb1b	95	47.417	ENSSPUG00000002969	SETDB1	70	47.614	Sphenodon_punctatus
ENSEBUG00000005735	setdb1b	95	47.219	ENSSSCG00000006645	SETDB1	80	47.041	Sus_scrofa
ENSEBUG00000005735	setdb1b	95	46.538	ENSTGUG00000004684	SETDB1	75	47.125	Taeniopygia_guttata
ENSEBUG00000005735	setdb1b	74	58.974	ENSTRUG00000014641	setdb1b	61	52.095	Takifugu_rubripes
ENSEBUG00000005735	setdb1b	95	45.748	ENSTNIG00000008065	setdb1b	70	47.323	Tetraodon_nigroviridis
ENSEBUG00000005735	setdb1b	95	46.505	ENSTBEG00000009306	SETDB1	76	47.379	Tupaia_belangeri
ENSEBUG00000005735	setdb1b	95	46.633	ENSTTRG00000006966	SETDB1	71	46.907	Tursiops_truncatus
ENSEBUG00000005735	setdb1b	95	45.990	ENSUAMG00000026724	SETDB1	71	47.444	Ursus_americanus
ENSEBUG00000005735	setdb1b	95	46.450	ENSUMAG00000003141	SETDB1	70	47.342	Ursus_maritimus
ENSEBUG00000005735	setdb1b	95	47.166	ENSVVUG00000011637	SETDB1	71	47.276	Vulpes_vulpes
ENSEBUG00000005735	setdb1b	95	45.297	ENSXETG00000008936	setdb1	70	46.490	Xenopus_tropicalis
ENSEBUG00000005735	setdb1b	95	45.640	ENSXCOG00000019497	setdb1b	69	45.416	Xiphophorus_couchianus
ENSEBUG00000005735	setdb1b	95	45.246	ENSXMAG00000016600	setdb1b	68	46.989	Xiphophorus_maculatus