EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005791 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 148684 bases
Position: chrFYBX02010306.1:593281-741964
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009004	ResIII	PF04851.15	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009521	-	2247	-	ENSEBUP00000009004	748 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005791	chd1l	60	34.951	ENSEBUG00000003969	smarcad1a	74	34.951
ENSEBUG00000005791	chd1l	59	34.848	ENSEBUG00000016152	hells	68	34.848
ENSEBUG00000005791	chd1l	70	40.445	ENSEBUG00000014773	SMARCA5	55	40.445
ENSEBUG00000005791	chd1l	59	31.870	ENSEBUG00000009104	rad54b	56	32.177
ENSEBUG00000005791	chd1l	68	41.697	ENSEBUG00000001239	smarca5	53	41.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005791	chd1l	75	76.596	ENSG00000131778	CHD1L	89	48.503	Homo_sapiens
ENSEBUG00000005791	chd1l	73	73.913	ENSAPOG00000001539	chd1l	67	73.913	Acanthochromis_polyacanthus
ENSEBUG00000005791	chd1l	81	60.811	ENSAMEG00000017063	CHD1L	67	60.811	Ailuropoda_melanoleuca
ENSEBUG00000005791	chd1l	73	78.261	ENSACIG00000001164	chd1l	64	78.261	Amphilophus_citrinellus
ENSEBUG00000005791	chd1l	84	53.179	ENSAOCG00000014510	chd1l	66	51.642	Amphiprion_ocellaris
ENSEBUG00000005791	chd1l	73	77.778	ENSAPEG00000017450	chd1l	64	77.778	Amphiprion_percula
ENSEBUG00000005791	chd1l	73	76.087	ENSAPEG00000017573	chd1l	64	76.087	Amphiprion_percula
ENSEBUG00000005791	chd1l	75	62.712	ENSATEG00000013058	chd1l	62	62.712	Anabas_testudineus
ENSEBUG00000005791	chd1l	74	70.000	ENSAPLG00000009976	CHD1L	64	58.824	Anas_platyrhynchos
ENSEBUG00000005791	chd1l	74	70.000	ENSACAG00000017686	CHD1L	66	59.701	Anolis_carolinensis
ENSEBUG00000005791	chd1l	75	76.596	ENSANAG00000024347	CHD1L	67	64.062	Aotus_nancymaae
ENSEBUG00000005791	chd1l	81	62.121	ENSACLG00000019304	chd1l	68	62.121	Astatotilapia_calliptera
ENSEBUG00000005791	chd1l	86	49.713	ENSAMXG00000012367	chd1l	65	48.968	Astyanax_mexicanus
ENSEBUG00000005791	chd1l	77	78.723	ENSBTAG00000020831	CHD1L	65	78.723	Bos_taurus
ENSEBUG00000005791	chd1l	77	76.596	ENSCJAG00000002406	CHD1L	70	63.514	Callithrix_jacchus
ENSEBUG00000005791	chd1l	80	64.706	ENSCAFG00000010944	CHD1L	67	64.706	Canis_familiaris
ENSEBUG00000005791	chd1l	78	75.556	ENSCAFG00020020121	CHD1L	67	75.556	Canis_lupus_dingo
ENSEBUG00000005791	chd1l	75	78.723	ENSCHIG00000013871	CHD1L	64	78.723	Capra_hircus
ENSEBUG00000005791	chd1l	75	78.723	ENSTSYG00000003005	CHD1L	67	78.723	Carlito_syrichta
ENSEBUG00000005791	chd1l	77	67.273	ENSCPOG00000009000	CHD1L	66	62.162	Cavia_porcellus
ENSEBUG00000005791	chd1l	77	76.596	ENSCCAG00000036079	CHD1L	87	48.087	Cebus_capucinus
ENSEBUG00000005791	chd1l	77	76.596	ENSCATG00000031044	CHD1L	67	65.079	Cercocebus_atys
ENSEBUG00000005791	chd1l	75	76.596	ENSCLAG00000000880	CHD1L	69	61.538	Chinchilla_lanigera
ENSEBUG00000005791	chd1l	77	76.596	ENSCSAG00000018386	CHD1L	65	76.596	Chlorocebus_sabaeus
ENSEBUG00000005791	chd1l	74	74.000	ENSCPBG00000002600	CHD1L	65	58.571	Chrysemys_picta_bellii
ENSEBUG00000005791	chd1l	77	76.596	ENSCANG00000020239	CHD1L	67	61.905	Colobus_angolensis_palliatus
ENSEBUG00000005791	chd1l	74	76.923	ENSCGRG00001021624	Chd1l	65	56.250	Cricetulus_griseus_chok1gshd
ENSEBUG00000005791	chd1l	71	81.081	ENSCGRG00000007554	Chd1l	66	56.250	Cricetulus_griseus_crigri
ENSEBUG00000005791	chd1l	79	78.261	ENSCVAG00000002595	chd1l	63	78.261	Cyprinodon_variegatus
ENSEBUG00000005791	chd1l	83	54.757	ENSDARG00000015471	chd1l	65	53.137	Danio_rerio
ENSEBUG00000005791	chd1l	80	58.108	ENSDNOG00000019504	CHD1L	67	58.108	Dasypus_novemcinctus
ENSEBUG00000005791	chd1l	80	57.143	ENSDORG00000013555	Chd1l	66	57.143	Dipodomys_ordii
ENSEBUG00000005791	chd1l	65	63.636	ENSETEG00000008445	CHD1L	53	63.636	Echinops_telfairi
ENSEBUG00000005791	chd1l	75	76.596	ENSEASG00005007364	CHD1L	66	76.596	Equus_asinus_asinus
ENSEBUG00000005791	chd1l	75	76.596	ENSECAG00000008915	CHD1L	66	76.596	Equus_caballus
ENSEBUG00000005791	chd1l	88	45.588	ENSELUG00000016844	chd1l	66	45.588	Esox_lucius
ENSEBUG00000005791	chd1l	73	74.000	ENSFCAG00000007777	CHD1L	68	61.039	Felis_catus
ENSEBUG00000005791	chd1l	76	54.286	ENSFALG00000006087	CHD1L	67	54.286	Ficedula_albicollis
ENSEBUG00000005791	chd1l	73	76.596	ENSFDAG00000012431	CHD1L	68	76.596	Fukomys_damarensis
ENSEBUG00000005791	chd1l	86	52.239	ENSFHEG00000012420	chd1l	69	50.439	Fundulus_heteroclitus
ENSEBUG00000005791	chd1l	76	55.224	ENSGALG00000015038	CHD1L	64	55.224	Gallus_gallus
ENSEBUG00000005791	chd1l	74	76.087	ENSGAFG00000018198	chd1l	65	76.087	Gambusia_affinis
ENSEBUG00000005791	chd1l	67	52.907	ENSGACG00000014042	chd1l	98	53.101	Gasterosteus_aculeatus
ENSEBUG00000005791	chd1l	73	69.565	ENSGAGG00000014432	CHD1L	64	69.565	Gopherus_agassizii
ENSEBUG00000005791	chd1l	75	76.596	ENSGGOG00000001067	CHD1L	64	76.190	Gorilla_gorilla
ENSEBUG00000005791	chd1l	79	76.087	ENSHBUG00000007464	chd1l	67	76.087	Haplochromis_burtoni
ENSEBUG00000005791	chd1l	75	76.596	ENSHGLG00000008933	CHD1L	69	62.162	Heterocephalus_glaber_female
ENSEBUG00000005791	chd1l	72	76.596	ENSHGLG00100007155	CHD1L	68	62.162	Heterocephalus_glaber_male
ENSEBUG00000005791	chd1l	76	72.917	ENSHCOG00000012787	chd1l	64	72.917	Hippocampus_comes
ENSEBUG00000005791	chd1l	85	50.575	ENSIPUG00000022617	chd1l	65	50.469	Ictalurus_punctatus
ENSEBUG00000005791	chd1l	83	62.162	ENSSTOG00000007032	CHD1L	68	62.162	Ictidomys_tridecemlineatus
ENSEBUG00000005791	chd1l	86	52.150	ENSKMAG00000014358	chd1l	65	51.948	Kryptolebias_marmoratus
ENSEBUG00000005791	chd1l	74	69.565	ENSLBEG00000023845	chd1l	66	69.565	Labrus_bergylta
ENSEBUG00000005791	chd1l	86	48.885	ENSLACG00000006262	CHD1L	64	48.885	Latimeria_chalumnae
ENSEBUG00000005791	chd1l	86	54.664	ENSLOCG00000010574	chd1l	64	54.664	Lepisosteus_oculatus
ENSEBUG00000005791	chd1l	74	83.333	ENSLAFG00000018136	CHD1L	67	76.596	Loxodonta_africana
ENSEBUG00000005791	chd1l	75	76.596	ENSMFAG00000043562	CHD1L	67	65.079	Macaca_fascicularis
ENSEBUG00000005791	chd1l	77	76.596	ENSMMUG00000009024	CHD1L	87	50.000	Macaca_mulatta
ENSEBUG00000005791	chd1l	77	76.596	ENSMNEG00000039905	CHD1L	67	65.079	Macaca_nemestrina
ENSEBUG00000005791	chd1l	77	76.596	ENSMLEG00000030900	CHD1L	67	65.079	Mandrillus_leucophaeus
ENSEBUG00000005791	chd1l	84	52.023	ENSMAMG00000012822	chd1l	76	52.207	Mastacembelus_armatus
ENSEBUG00000005791	chd1l	87	53.358	ENSMZEG00005020830	chd1l	65	53.358	Maylandia_zebra
ENSEBUG00000005791	chd1l	76	53.731	ENSMGAG00000014304	CHD1L	67	53.731	Meleagris_gallopavo
ENSEBUG00000005791	chd1l	77	74.468	ENSMICG00000002497	CHD1L	89	51.852	Microcebus_murinus
ENSEBUG00000005791	chd1l	77	62.500	ENSMOCG00000006305	Chd1l	65	62.500	Microtus_ochrogaster
ENSEBUG00000005791	chd1l	76	69.231	ENSMMOG00000005964	chd1l	61	69.231	Mola_mola
ENSEBUG00000005791	chd1l	76	70.213	ENSMODG00000018717	CHD1L	65	70.213	Monodelphis_domestica
ENSEBUG00000005791	chd1l	84	52.281	ENSMALG00000014675	chd1l	66	50.631	Monopterus_albus
ENSEBUG00000005791	chd1l	77	62.903	MGP_CAROLIEiJ_G0025401	Chd1l	66	62.903	Mus_caroli
ENSEBUG00000005791	chd1l	75	76.596	ENSMUSG00000028089	Chd1l	65	62.903	Mus_musculus
ENSEBUG00000005791	chd1l	77	60.938	MGP_PahariEiJ_G0026845	Chd1l	66	60.938	Mus_pahari
ENSEBUG00000005791	chd1l	75	74.468	MGP_SPRETEiJ_G0026347	Chd1l	69	61.290	Mus_spretus
ENSEBUG00000005791	chd1l	76	62.319	ENSMPUG00000000615	CHD1L	64	62.319	Mustela_putorius_furo
ENSEBUG00000005791	chd1l	75	72.340	ENSMLUG00000007573	CHD1L	67	58.108	Myotis_lucifugus
ENSEBUG00000005791	chd1l	79	61.905	ENSNGAG00000000908	Chd1l	66	61.905	Nannospalax_galili
ENSEBUG00000005791	chd1l	78	69.841	ENSNBRG00000006021	chd1l	66	69.841	Neolamprologus_brichardi
ENSEBUG00000005791	chd1l	77	76.087	ENSNLEG00000000179	CHD1L	67	61.905	Nomascus_leucogenys
ENSEBUG00000005791	chd1l	74	75.000	ENSOPRG00000006973	CHD1L	67	65.957	Ochotona_princeps
ENSEBUG00000005791	chd1l	75	74.468	ENSODEG00000002494	CHD1L	67	59.459	Octodon_degus
ENSEBUG00000005791	chd1l	92	51.920	ENSONIG00000003183	chd1l	69	51.064	Oreochromis_niloticus
ENSEBUG00000005791	chd1l	63	55.193	ENSOANG00000003068	CHD1L	58	55.601	Ornithorhynchus_anatinus
ENSEBUG00000005791	chd1l	75	76.596	ENSOCUG00000009336	CHD1L	64	60.000	Oryctolagus_cuniculus
ENSEBUG00000005791	chd1l	80	59.420	ENSORLG00000003673	chd1l	68	59.420	Oryzias_latipes
ENSEBUG00000005791	chd1l	88	51.184	ENSORLG00020005123	chd1l	89	50.160	Oryzias_latipes_hni
ENSEBUG00000005791	chd1l	77	78.261	ENSORLG00015001680	chd1l	68	78.261	Oryzias_latipes_hsok
ENSEBUG00000005791	chd1l	59	60.500	ENSOMEG00000006109	chd1l	55	54.936	Oryzias_melastigma
ENSEBUG00000005791	chd1l	77	72.340	ENSOGAG00000008775	CHD1L	65	72.340	Otolemur_garnettii
ENSEBUG00000005791	chd1l	73	78.723	ENSOARG00000020547	CHD1L	65	78.723	Ovis_aries
ENSEBUG00000005791	chd1l	75	76.190	ENSPPAG00000039193	CHD1L	62	76.190	Pan_paniscus
ENSEBUG00000005791	chd1l	76	74.000	ENSPPRG00000010258	CHD1L	68	59.740	Panthera_pardus
ENSEBUG00000005791	chd1l	75	76.596	ENSPTRG00000001220	CHD1L	61	76.190	Pan_troglodytes
ENSEBUG00000005791	chd1l	75	76.596	ENSPANG00000009170	CHD1L	62	76.190	Papio_anubis
ENSEBUG00000005791	chd1l	84	53.065	ENSPKIG00000022166	chd1l	69	48.490	Paramormyrops_kingsleyae
ENSEBUG00000005791	chd1l	78	72.000	ENSPSIG00000012595	CHD1L	68	53.086	Pelodiscus_sinensis
ENSEBUG00000005791	chd1l	75	76.596	ENSPEMG00000013528	Chd1l	67	62.500	Peromyscus_maniculatus_bairdii
ENSEBUG00000005791	chd1l	71	59.016	ENSPCIG00000030409	CHD1L	67	59.016	Phascolarctos_cinereus
ENSEBUG00000005791	chd1l	85	52.372	ENSPFOG00000015948	chd1l	64	52.372	Poecilia_formosa
ENSEBUG00000005791	chd1l	85	52.852	ENSPLAG00000015145	chd1l	66	57.576	Poecilia_latipinna
ENSEBUG00000005791	chd1l	84	53.502	ENSPMEG00000008720	chd1l	70	51.825	Poecilia_mexicana
ENSEBUG00000005791	chd1l	74	76.087	ENSPREG00000017885	chd1l	65	76.087	Poecilia_reticulata
ENSEBUG00000005791	chd1l	76	76.596	ENSPPYG00000000946	CHD1L	65	63.492	Pongo_abelii
ENSEBUG00000005791	chd1l	69	48.582	ENSPCAG00000005959	CHD1L	60	48.257	Procavia_capensis
ENSEBUG00000005791	chd1l	73	76.596	ENSPVAG00000006084	CHD1L	66	76.596	Pteropus_vampyrus
ENSEBUG00000005791	chd1l	79	78.261	ENSPNYG00000013001	chd1l	66	78.261	Pundamilia_nyererei
ENSEBUG00000005791	chd1l	85	52.581	ENSPNAG00000011881	chd1l	64	52.581	Pygocentrus_nattereri
ENSEBUG00000005791	chd1l	81	65.517	ENSRNOG00000017669	Chd1l	69	62.500	Rattus_norvegicus
ENSEBUG00000005791	chd1l	77	76.596	ENSRBIG00000041272	CHD1L	65	76.596	Rhinopithecus_bieti
ENSEBUG00000005791	chd1l	76	74.419	ENSRROG00000041354	CHD1L	65	74.419	Rhinopithecus_roxellana
ENSEBUG00000005791	chd1l	76	70.213	ENSSHAG00000017395	CHD1L	68	55.405	Sarcophilus_harrisii
ENSEBUG00000005791	chd1l	74	69.767	ENSSFOG00015003649	chd1l	65	69.767	Scleropages_formosus
ENSEBUG00000005791	chd1l	73	79.070	ENSSMAG00000019377	chd1l	71	79.070	Scophthalmus_maximus
ENSEBUG00000005791	chd1l	75	76.087	ENSSDUG00000019831	chd1l	64	76.087	Seriola_dumerili
ENSEBUG00000005791	chd1l	75	76.087	ENSSLDG00000012714	chd1l	64	76.087	Seriola_lalandi_dorsalis
ENSEBUG00000005791	chd1l	78	57.143	ENSSPUG00000016865	CHD1L	68	57.143	Sphenodon_punctatus
ENSEBUG00000005791	chd1l	84	52.998	ENSSPAG00000017653	chd1l	71	51.091	Stegastes_partitus
ENSEBUG00000005791	chd1l	77	76.596	ENSSSCG00000006701	CHD1L	67	60.811	Sus_scrofa
ENSEBUG00000005791	chd1l	74	66.000	ENSTGUG00000013392	-	70	51.366	Taeniopygia_guttata
ENSEBUG00000005791	chd1l	75	71.739	ENSTNIG00000004902	chd1l	69	71.739	Tetraodon_nigroviridis
ENSEBUG00000005791	chd1l	76	60.811	ENSTTRG00000011711	CHD1L	67	60.811	Tursiops_truncatus
ENSEBUG00000005791	chd1l	77	76.596	ENSUAMG00000021991	CHD1L	65	76.596	Ursus_americanus
ENSEBUG00000005791	chd1l	77	76.596	ENSUMAG00000009733	CHD1L	65	76.596	Ursus_maritimus
ENSEBUG00000005791	chd1l	80	64.706	ENSVVUG00000007316	CHD1L	64	64.706	Vulpes_vulpes
ENSEBUG00000005791	chd1l	86	50.187	ENSXCOG00000008336	chd1l	65	50.187	Xiphophorus_couchianus
ENSEBUG00000005791	chd1l	77	76.087	ENSXMAG00000015898	chd1l	68	76.087	Xiphophorus_maculatus