EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005820 (Gene tree)
Gene ID: -
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 130454 bases
Position: chrFYBX02006014.1:512558-643011
Accession: ZDB-GENE-030131-3955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009022	PARP	PF00644.20	4e-70	1	1
ENSEBUP00000008996	PARP	PF00644.20	4.4e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009540	-	3772	-	ENSEBUP00000009022	989 (aa)	-	-
ENSEBUT00000009513	-	3656	-	ENSEBUP00000008996	1038 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005820	parp1	100	58.074	ENSG00000143799	PARP1	99	58.191	Homo_sapiens
ENSEBUG00000005820	parp1	100	59.397	ENSAPOG00000006414	parp1	97	59.425	Acanthochromis_polyacanthus
ENSEBUG00000005820	parp1	100	57.515	ENSAMEG00000014451	PARP1	99	57.842	Ailuropoda_melanoleuca
ENSEBUG00000005820	parp1	100	59.375	ENSACIG00000005651	parp1	99	59.375	Amphilophus_citrinellus
ENSEBUG00000005820	parp1	100	59.296	ENSAOCG00000021005	parp1	97	59.325	Amphiprion_ocellaris
ENSEBUG00000005820	parp1	100	59.397	ENSAPEG00000004784	parp1	97	59.425	Amphiprion_percula
ENSEBUG00000005820	parp1	100	59.095	ENSATEG00000010457	parp1	97	59.046	Anabas_testudineus
ENSEBUG00000005820	parp1	91	59.688	ENSAPLG00000014039	PARP1	99	59.688	Anas_platyrhynchos
ENSEBUG00000005820	parp1	100	59.073	ENSACAG00000006189	PARP1	98	58.760	Anolis_carolinensis
ENSEBUG00000005820	parp1	100	58.133	ENSANAG00000032699	PARP1	99	58.249	Aotus_nancymaae
ENSEBUG00000005820	parp1	100	59.598	ENSACLG00000015489	parp1	99	59.598	Astatotilapia_calliptera
ENSEBUG00000005820	parp1	100	58.417	ENSAMXG00000006465	parp1	97	58.539	Astyanax_mexicanus
ENSEBUG00000005820	parp1	100	56.056	ENSBTAG00000000837	PARP1	99	56.325	Bos_taurus
ENSEBUG00000005820	parp1	79	42.353	WBGene00004049	parp-1	99	44.633	Caenorhabditis_elegans
ENSEBUG00000005820	parp1	100	57.831	ENSCJAG00000012831	PARP1	99	57.900	Callithrix_jacchus
ENSEBUG00000005820	parp1	100	57.243	ENSCAFG00000016089	PARP1	100	57.545	Canis_familiaris
ENSEBUG00000005820	parp1	100	57.143	ENSCAFG00020001660	PARP1	99	57.445	Canis_lupus_dingo
ENSEBUG00000005820	parp1	100	56.256	ENSCHIG00000018072	PARP1	99	56.426	Capra_hircus
ENSEBUG00000005820	parp1	94	57.602	ENSTSYG00000003699	PARP1	99	57.709	Carlito_syrichta
ENSEBUG00000005820	parp1	100	49.043	ENSCAPG00000011113	-	99	48.283	Cavia_aperea
ENSEBUG00000005820	parp1	100	57.545	ENSCPOG00000015643	-	99	57.646	Cavia_porcellus
ENSEBUG00000005820	parp1	100	57.831	ENSCCAG00000033484	PARP1	99	57.948	Cebus_capucinus
ENSEBUG00000005820	parp1	100	57.874	ENSCATG00000038981	PARP1	99	57.990	Cercocebus_atys
ENSEBUG00000005820	parp1	100	57.545	ENSCLAG00000006637	PARP1	98	57.073	Chinchilla_lanigera
ENSEBUG00000005820	parp1	65	68.992	ENSCHOG00000003539	PARP1	64	68.992	Choloepus_hoffmanni
ENSEBUG00000005820	parp1	100	60.585	ENSCPBG00000011958	PARP1	99	60.585	Chrysemys_picta_bellii
ENSEBUG00000005820	parp1	100	57.773	ENSCANG00000041340	PARP1	100	57.974	Colobus_angolensis_palliatus
ENSEBUG00000005820	parp1	100	57.688	ENSCGRG00001020559	Parp1	98	57.495	Cricetulus_griseus_chok1gshd
ENSEBUG00000005820	parp1	100	57.688	ENSCGRG00000004864	Parp1	100	57.773	Cricetulus_griseus_crigri
ENSEBUG00000005820	parp1	92	66.860	ENSCSEG00000020665	parp1	99	64.522	Cynoglossus_semilaevis
ENSEBUG00000005820	parp1	100	59.639	ENSCVAG00000021372	parp1	99	60.120	Cyprinodon_variegatus
ENSEBUG00000005820	parp1	100	58.559	ENSDARG00000019529	parp1	97	58.375	Danio_rerio
ENSEBUG00000005820	parp1	100	56.613	ENSDNOG00000012059	PARP1	100	56.928	Dasypus_novemcinctus
ENSEBUG00000005820	parp1	100	56.482	ENSDORG00000005234	Parp1	100	56.670	Dipodomys_ordii
ENSEBUG00000005820	parp1	99	40.321	FBgn0010247	Parp	98	39.980	Drosophila_melanogaster
ENSEBUG00000005820	parp1	87	68.992	ENSETEG00000013254	PARP1	87	68.992	Echinops_telfairi
ENSEBUG00000005820	parp1	98	57.362	ENSEASG00005013275	PARP1	97	57.387	Equus_asinus_asinus
ENSEBUG00000005820	parp1	100	57.573	ENSECAG00000019207	PARP1	98	57.791	Equus_caballus
ENSEBUG00000005820	parp1	100	56.583	ENSEEUG00000012253	PARP1	99	56.683	Erinaceus_europaeus
ENSEBUG00000005820	parp1	100	57.374	ENSELUG00000017336	parp1	98	58.824	Esox_lucius
ENSEBUG00000005820	parp1	100	57.889	ENSFCAG00000005777	PARP1	99	58.016	Felis_catus
ENSEBUG00000005820	parp1	100	60.181	ENSFALG00000011578	PARP1	100	60.362	Ficedula_albicollis
ENSEBUG00000005820	parp1	100	57.243	ENSFDAG00000017662	PARP1	100	57.229	Fukomys_damarensis
ENSEBUG00000005820	parp1	100	59.739	ENSFHEG00000001117	parp1	99	60.120	Fundulus_heteroclitus
ENSEBUG00000005820	parp1	100	57.948	ENSGMOG00000014929	parp1	100	58.133	Gadus_morhua
ENSEBUG00000005820	parp1	100	60.282	ENSGALG00000009228	PARP1	99	60.585	Gallus_gallus
ENSEBUG00000005820	parp1	100	59.378	ENSGAFG00000010450	parp1	97	59.604	Gambusia_affinis
ENSEBUG00000005820	parp1	100	57.789	ENSGACG00000011280	parp1	99	57.932	Gasterosteus_aculeatus
ENSEBUG00000005820	parp1	100	60.040	ENSGAGG00000010066	PARP1	99	60.040	Gopherus_agassizii
ENSEBUG00000005820	parp1	100	57.974	ENSGGOG00000006308	PARP1	99	58.090	Gorilla_gorilla
ENSEBUG00000005820	parp1	100	59.698	ENSHBUG00000010490	parp1	99	59.698	Haplochromis_burtoni
ENSEBUG00000005820	parp1	100	57.143	ENSHGLG00000003992	PARP1	93	57.272	Heterocephalus_glaber_female
ENSEBUG00000005820	parp1	100	57.143	ENSHGLG00100016965	PARP1	93	57.272	Heterocephalus_glaber_male
ENSEBUG00000005820	parp1	100	58.517	ENSHCOG00000011619	parp1	99	58.800	Hippocampus_comes
ENSEBUG00000005820	parp1	100	57.654	ENSIPUG00000020250	parp1	99	57.853	Ictalurus_punctatus
ENSEBUG00000005820	parp1	100	57.430	ENSSTOG00000016000	PARP1	99	57.646	Ictidomys_tridecemlineatus
ENSEBUG00000005820	parp1	100	57.948	ENSJJAG00000023497	Parp1	97	57.910	Jaculus_jaculus
ENSEBUG00000005820	parp1	100	59.077	ENSKMAG00000011627	parp1	99	59.077	Kryptolebias_marmoratus
ENSEBUG00000005820	parp1	100	58.853	ENSLBEG00000013376	parp1	97	58.905	Labrus_bergylta
ENSEBUG00000005820	parp1	100	49.109	ENSLACG00000002735	PARP1	98	49.131	Latimeria_chalumnae
ENSEBUG00000005820	parp1	100	59.476	ENSLOCG00000015798	parp1	97	59.222	Lepisosteus_oculatus
ENSEBUG00000005820	parp1	100	56.640	ENSLAFG00000007830	PARP1	100	56.827	Loxodonta_africana
ENSEBUG00000005820	parp1	100	57.874	ENSMFAG00000002526	PARP1	99	57.990	Macaca_fascicularis
ENSEBUG00000005820	parp1	100	57.874	ENSMMUG00000021820	PARP1	99	57.990	Macaca_mulatta
ENSEBUG00000005820	parp1	100	57.874	ENSMNEG00000034074	PARP1	99	57.990	Macaca_nemestrina
ENSEBUG00000005820	parp1	100	56.300	ENSMLEG00000012344	PARP1	99	56.413	Mandrillus_leucophaeus
ENSEBUG00000005820	parp1	100	58.652	ENSMAMG00000020652	parp1	99	58.954	Mastacembelus_armatus
ENSEBUG00000005820	parp1	100	59.698	ENSMZEG00005016907	parp1	99	59.698	Maylandia_zebra
ENSEBUG00000005820	parp1	100	60.848	ENSMGAG00000007760	PARP1	100	60.926	Meleagris_gallopavo
ENSEBUG00000005820	parp1	100	57.487	ENSMAUG00000008306	Parp1	98	57.298	Mesocricetus_auratus
ENSEBUG00000005820	parp1	100	55.030	ENSMICG00000017076	PARP1	99	55.276	Microcebus_murinus
ENSEBUG00000005820	parp1	100	57.487	ENSMOCG00000014315	Parp1	98	57.594	Microtus_ochrogaster
ENSEBUG00000005820	parp1	100	58.877	ENSMMOG00000015966	parp1	97	58.829	Mola_mola
ENSEBUG00000005820	parp1	100	58.350	ENSMODG00000006076	PARP1	98	58.153	Monodelphis_domestica
ENSEBUG00000005820	parp1	100	57.789	ENSMALG00000004057	parp1	97	57.753	Monopterus_albus
ENSEBUG00000005820	parp1	100	57.673	MGP_CAROLIEiJ_G0014978	Parp1	100	67.347	Mus_caroli
ENSEBUG00000005820	parp1	100	57.573	ENSMUSG00000026496	Parp1	99	67.347	Mus_musculus
ENSEBUG00000005820	parp1	100	57.573	MGP_SPRETEiJ_G0015777	Parp1	100	67.347	Mus_spretus
ENSEBUG00000005820	parp1	100	57.990	ENSMPUG00000004585	PARP1	99	58.191	Mustela_putorius_furo
ENSEBUG00000005820	parp1	76	66.898	ENSMLUG00000012285	PARP1	83	66.898	Myotis_lucifugus
ENSEBUG00000005820	parp1	100	57.143	ENSNGAG00000003885	Parp1	98	57.495	Nannospalax_galili
ENSEBUG00000005820	parp1	100	59.698	ENSNBRG00000017434	parp1	99	59.698	Neolamprologus_brichardi
ENSEBUG00000005820	parp1	100	46.062	ENSNLEG00000013905	PARP1	99	65.206	Nomascus_leucogenys
ENSEBUG00000005820	parp1	70	68.072	ENSMEUG00000007720	PARP1	87	68.072	Notamacropus_eugenii
ENSEBUG00000005820	parp1	100	57.430	ENSOPRG00000011722	PARP1	99	57.932	Ochotona_princeps
ENSEBUG00000005820	parp1	99	56.623	ENSODEG00000007424	PARP1	98	56.367	Octodon_degus
ENSEBUG00000005820	parp1	100	59.598	ENSONIG00000013486	parp1	99	59.899	Oreochromis_niloticus
ENSEBUG00000005820	parp1	100	59.598	ENSOANG00000001488	PARP1	100	59.899	Ornithorhynchus_anatinus
ENSEBUG00000005820	parp1	100	57.847	ENSOCUG00000017820	PARP1	99	58.149	Oryctolagus_cuniculus
ENSEBUG00000005820	parp1	100	60.020	ENSORLG00000013691	parp1	99	60.240	Oryzias_latipes
ENSEBUG00000005820	parp1	100	59.920	ENSORLG00020001074	parp1	99	60.200	Oryzias_latipes_hni
ENSEBUG00000005820	parp1	100	59.920	ENSORLG00015007090	parp1	99	60.140	Oryzias_latipes_hsok
ENSEBUG00000005820	parp1	100	57.688	ENSOGAG00000016206	PARP1	99	57.789	Otolemur_garnettii
ENSEBUG00000005820	parp1	100	56.456	ENSOARG00000000811	PARP1	97	56.448	Ovis_aries
ENSEBUG00000005820	parp1	100	57.874	ENSPPAG00000040862	PARP1	99	57.990	Pan_paniscus
ENSEBUG00000005820	parp1	100	57.487	ENSPPRG00000003528	PARP1	100	57.974	Panthera_pardus
ENSEBUG00000005820	parp1	97	51.189	ENSPTIG00000009102	PARP1	98	51.343	Panthera_tigris_altaica
ENSEBUG00000005820	parp1	100	57.874	ENSPTRG00000002049	PARP1	99	57.990	Pan_troglodytes
ENSEBUG00000005820	parp1	100	57.816	ENSPANG00000011198	PARP1	99	57.932	Papio_anubis
ENSEBUG00000005820	parp1	100	58.628	ENSPKIG00000006039	parp1	100	58.475	Paramormyrops_kingsleyae
ENSEBUG00000005820	parp1	100	59.718	ENSPSIG00000016374	PARP1	100	59.899	Pelodiscus_sinensis
ENSEBUG00000005820	parp1	100	58.175	ENSPMGG00000008936	parp1	96	58.175	Periophthalmus_magnuspinnatus
ENSEBUG00000005820	parp1	100	57.588	ENSPEMG00000020230	Parp1	98	57.396	Peromyscus_maniculatus_bairdii
ENSEBUG00000005820	parp1	100	58.652	ENSPCIG00000006436	PARP1	98	58.611	Phascolarctos_cinereus
ENSEBUG00000005820	parp1	100	59.077	ENSPFOG00000002342	parp1	97	58.929	Poecilia_formosa
ENSEBUG00000005820	parp1	100	59.278	ENSPLAG00000000909	parp1	97	59.505	Poecilia_latipinna
ENSEBUG00000005820	parp1	100	59.278	ENSPMEG00000013979	parp1	97	59.505	Poecilia_mexicana
ENSEBUG00000005820	parp1	100	58.717	ENSPREG00000001114	parp1	97	58.952	Poecilia_reticulata
ENSEBUG00000005820	parp1	100	57.773	ENSPPYG00000000164	PARP1	100	57.889	Pongo_abelii
ENSEBUG00000005820	parp1	57	68.308	ENSPCAG00000005558	-	55	68.308	Procavia_capensis
ENSEBUG00000005820	parp1	100	58.191	ENSPCOG00000016918	PARP1	98	57.988	Propithecus_coquereli
ENSEBUG00000005820	parp1	86	65.728	ENSPVAG00000005543	PARP1	81	65.728	Pteropus_vampyrus
ENSEBUG00000005820	parp1	100	59.598	ENSPNYG00000009702	parp1	99	59.598	Pundamilia_nyererei
ENSEBUG00000005820	parp1	100	57.738	ENSPNAG00000002787	parp1	97	58.218	Pygocentrus_nattereri
ENSEBUG00000005820	parp1	100	57.214	ENSRNOG00000003084	Parp1	98	57.438	Rattus_norvegicus
ENSEBUG00000005820	parp1	100	57.773	ENSRBIG00000044893	PARP1	100	61.058	Rhinopithecus_bieti
ENSEBUG00000005820	parp1	100	44.612	ENSRROG00000040615	-	97	50.781	Rhinopithecus_roxellana
ENSEBUG00000005820	parp1	100	57.773	ENSRROG00000029280	PARP1	100	61.058	Rhinopithecus_roxellana
ENSEBUG00000005820	parp1	100	57.831	ENSSBOG00000010144	PARP1	99	57.948	Saimiri_boliviensis_boliviensis
ENSEBUG00000005820	parp1	100	58.894	ENSSHAG00000001991	PARP1	100	59.356	Sarcophilus_harrisii
ENSEBUG00000005820	parp1	100	59.397	ENSSFOG00015020017	parp1	97	59.443	Scleropages_formosus
ENSEBUG00000005820	parp1	100	58.818	ENSSMAG00000013799	parp1	97	58.853	Scophthalmus_maximus
ENSEBUG00000005820	parp1	100	59.419	ENSSDUG00000016626	parp1	97	59.446	Seriola_dumerili
ENSEBUG00000005820	parp1	100	59.419	ENSSLDG00000006384	parp1	97	59.446	Seriola_lalandi_dorsalis
ENSEBUG00000005820	parp1	100	57.475	ENSSPUG00000007790	PARP1	98	56.903	Sphenodon_punctatus
ENSEBUG00000005820	parp1	100	57.704	ENSSPAG00000019074	parp1	97	58.785	Stegastes_partitus
ENSEBUG00000005820	parp1	100	56.841	ENSSSCG00000023660	PARP1	99	57.143	Sus_scrofa
ENSEBUG00000005820	parp1	93	59.130	ENSTGUG00000004260	-	100	59.348	Taeniopygia_guttata
ENSEBUG00000005820	parp1	100	58.753	ENSTRUG00000014490	parp1	97	58.870	Takifugu_rubripes
ENSEBUG00000005820	parp1	100	58.964	ENSTNIG00000016384	parp1	97	58.818	Tetraodon_nigroviridis
ENSEBUG00000005820	parp1	84	64.207	ENSTBEG00000002364	PARP1	92	64.207	Tupaia_belangeri
ENSEBUG00000005820	parp1	100	52.864	ENSTTRG00000000188	PARP1	99	53.065	Tursiops_truncatus
ENSEBUG00000005820	parp1	100	57.357	ENSUAMG00000014388	PARP1	100	57.658	Ursus_americanus
ENSEBUG00000005820	parp1	100	52.595	ENSUMAG00000014555	PARP1	99	53.226	Ursus_maritimus
ENSEBUG00000005820	parp1	81	66.797	ENSVPAG00000011411	PARP1	83	66.797	Vicugna_pacos
ENSEBUG00000005820	parp1	100	57.243	ENSVVUG00000001655	PARP1	100	57.545	Vulpes_vulpes
ENSEBUG00000005820	parp1	99	59.960	ENSXETG00000022610	parp1	97	59.980	Xenopus_tropicalis
ENSEBUG00000005820	parp1	100	59.178	ENSXMAG00000003632	parp1	97	59.226	Xiphophorus_maculatus