EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005830 (Gene tree)
Gene ID: -
Gene Symbol: rbms3
Alias: zgc:153698
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 114042 bases
Position: chrFYBX02009419.1:2934137-3048178
Accession: ZDB-GENE-060929-244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009035	RRM_1	PF00076.22	1.1e-27	1	2
ENSEBUP00000009035	RRM_1	PF00076.22	1.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009553	-	810	-	ENSEBUP00000009035	269 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005830	rbms3	85	55.849	ENSEBUG00000015959	-	65	56.767
ENSEBUG00000005830	rbms3	88	55.720	ENSEBUG00000003357	-	78	55.351
ENSEBUG00000005830	rbms3	78	58.436	ENSEBUG00000003216	-	66	57.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005830	rbms3	83	56.809	ENSG00000144642	RBMS3	62	70.732	Homo_sapiens
ENSEBUG00000005830	rbms3	83	56.154	ENSAPOG00000007266	rbms3	62	56.202	Acanthochromis_polyacanthus
ENSEBUG00000005830	rbms3	86	55.263	ENSAPOG00000003432	-	67	54.122	Acanthochromis_polyacanthus
ENSEBUG00000005830	rbms3	54	46.369	ENSAMEG00000005947	RBMS3	59	46.369	Ailuropoda_melanoleuca
ENSEBUG00000005830	rbms3	86	55.263	ENSACIG00000006987	-	76	54.122	Amphilophus_citrinellus
ENSEBUG00000005830	rbms3	83	56.800	ENSACIG00000021113	RBMS3	57	78.169	Amphilophus_citrinellus
ENSEBUG00000005830	rbms3	83	56.154	ENSAOCG00000021274	rbms3	60	56.202	Amphiprion_ocellaris
ENSEBUG00000005830	rbms3	86	55.263	ENSAOCG00000024104	-	63	53.763	Amphiprion_ocellaris
ENSEBUG00000005830	rbms3	84	55.385	ENSAPEG00000009481	-	67	54.212	Amphiprion_percula
ENSEBUG00000005830	rbms3	83	56.154	ENSAPEG00000016299	rbms3	68	56.154	Amphiprion_percula
ENSEBUG00000005830	rbms3	86	55.263	ENSATEG00000008433	-	67	54.122	Anabas_testudineus
ENSEBUG00000005830	rbms3	83	56.154	ENSATEG00000024295	rbms3	59	58.300	Anabas_testudineus
ENSEBUG00000005830	rbms3	83	56.420	ENSAPLG00000012270	RBMS3	64	53.597	Anas_platyrhynchos
ENSEBUG00000005830	rbms3	83	56.809	ENSACAG00000028664	RBMS3	68	53.333	Anolis_carolinensis
ENSEBUG00000005830	rbms3	83	56.809	ENSANAG00000021899	RBMS3	69	51.171	Aotus_nancymaae
ENSEBUG00000005830	rbms3	86	55.472	ENSACLG00000008976	-	61	53.684	Astatotilapia_calliptera
ENSEBUG00000005830	rbms3	83	55.769	ENSACLG00000018506	rbms3	69	55.598	Astatotilapia_calliptera
ENSEBUG00000005830	rbms3	84	55.985	ENSAMXG00000020388	rbms3	54	74.359	Astyanax_mexicanus
ENSEBUG00000005830	rbms3	52	76.596	ENSAMXG00000043770	-	61	72.436	Astyanax_mexicanus
ENSEBUG00000005830	rbms3	83	56.809	ENSBTAG00000044062	RBMS3	68	53.497	Bos_taurus
ENSEBUG00000005830	rbms3	83	56.809	ENSCJAG00000004312	RBMS3	69	51.171	Callithrix_jacchus
ENSEBUG00000005830	rbms3	83	56.809	ENSCAFG00000005464	RBMS3	65	53.497	Canis_familiaris
ENSEBUG00000005830	rbms3	83	56.809	ENSCAFG00020024980	RBMS3	72	65.421	Canis_lupus_dingo
ENSEBUG00000005830	rbms3	83	56.809	ENSCHIG00000009144	RBMS3	68	53.497	Capra_hircus
ENSEBUG00000005830	rbms3	65	51.196	ENSTSYG00000002615	RBMS3	67	48.198	Carlito_syrichta
ENSEBUG00000005830	rbms3	83	57.202	ENSCAPG00000017783	RBMS3	71	54.682	Cavia_aperea
ENSEBUG00000005830	rbms3	83	56.809	ENSCPOG00000006457	RBMS3	67	54.448	Cavia_porcellus
ENSEBUG00000005830	rbms3	83	56.809	ENSCCAG00000008671	RBMS3	69	51.171	Cebus_capucinus
ENSEBUG00000005830	rbms3	83	56.809	ENSCATG00000013222	RBMS3	69	51.171	Cercocebus_atys
ENSEBUG00000005830	rbms3	83	56.809	ENSCLAG00000005866	RBMS3	68	53.497	Chinchilla_lanigera
ENSEBUG00000005830	rbms3	72	54.585	ENSCHOG00000000758	RBMS3	52	54.585	Choloepus_hoffmanni
ENSEBUG00000005830	rbms3	83	56.420	ENSCPBG00000022678	RBMS3	75	52.982	Chrysemys_picta_bellii
ENSEBUG00000005830	rbms3	83	56.809	ENSCANG00000032137	RBMS3	69	51.171	Colobus_angolensis_palliatus
ENSEBUG00000005830	rbms3	83	57.198	ENSCGRG00001007243	Rbms3	70	54.804	Cricetulus_griseus_chok1gshd
ENSEBUG00000005830	rbms3	83	57.198	ENSCGRG00000004599	Rbms3	70	54.804	Cricetulus_griseus_crigri
ENSEBUG00000005830	rbms3	89	54.182	ENSCSEG00000014677	-	60	74.026	Cynoglossus_semilaevis
ENSEBUG00000005830	rbms3	83	55.385	ENSCSEG00000010011	RBMS3	69	56.855	Cynoglossus_semilaevis
ENSEBUG00000005830	rbms3	83	56.154	ENSCVAG00000022354	rbms3	61	56.154	Cyprinodon_variegatus
ENSEBUG00000005830	rbms3	89	53.846	ENSCVAG00000022814	-	80	69.000	Cyprinodon_variegatus
ENSEBUG00000005830	rbms3	84	55.939	ENSDARG00000044574	rbms3	100	77.083	Danio_rerio
ENSEBUG00000005830	rbms3	83	57.198	ENSDNOG00000016645	RBMS3	68	55.109	Dasypus_novemcinctus
ENSEBUG00000005830	rbms3	83	56.809	ENSDORG00000007220	Rbms3	68	53.497	Dipodomys_ordii
ENSEBUG00000005830	rbms3	83	56.809	ENSEASG00005006152	RBMS3	74	53.497	Equus_asinus_asinus
ENSEBUG00000005830	rbms3	83	56.809	ENSECAG00000017871	RBMS3	74	53.497	Equus_caballus
ENSEBUG00000005830	rbms3	83	47.082	ENSEEUG00000014337	RBMS3	73	44.755	Erinaceus_europaeus
ENSEBUG00000005830	rbms3	89	54.945	ENSELUG00000006905	-	62	74.675	Esox_lucius
ENSEBUG00000005830	rbms3	83	54.615	ENSELUG00000002862	rbms3	68	53.962	Esox_lucius
ENSEBUG00000005830	rbms3	83	56.420	ENSFCAG00000002130	RBMS3	68	53.147	Felis_catus
ENSEBUG00000005830	rbms3	83	56.420	ENSFALG00000009165	RBMS3	68	52.982	Ficedula_albicollis
ENSEBUG00000005830	rbms3	83	56.809	ENSFDAG00000008278	RBMS3	68	53.497	Fukomys_damarensis
ENSEBUG00000005830	rbms3	83	59.751	ENSFHEG00000004787	RBMS3	65	59.751	Fundulus_heteroclitus
ENSEBUG00000005830	rbms3	86	55.056	ENSGMOG00000002600	-	67	53.929	Gadus_morhua
ENSEBUG00000005830	rbms3	83	56.420	ENSGALG00000011439	RBMS3	68	52.982	Gallus_gallus
ENSEBUG00000005830	rbms3	83	55.769	ENSGAFG00000000168	rbms3	72	55.769	Gambusia_affinis
ENSEBUG00000005830	rbms3	86	55.263	ENSGAFG00000003329	-	67	54.122	Gambusia_affinis
ENSEBUG00000005830	rbms3	83	56.809	ENSGGOG00000007228	RBMS3	69	51.171	Gorilla_gorilla
ENSEBUG00000005830	rbms3	86	55.472	ENSHBUG00000019785	-	61	54.317	Haplochromis_burtoni
ENSEBUG00000005830	rbms3	83	56.809	ENSHGLG00000002170	RBMS3	68	53.497	Heterocephalus_glaber_female
ENSEBUG00000005830	rbms3	83	56.809	ENSHGLG00100014278	RBMS3	68	53.497	Heterocephalus_glaber_male
ENSEBUG00000005830	rbms3	85	56.107	ENSHCOG00000007894	-	75	54.122	Hippocampus_comes
ENSEBUG00000005830	rbms3	84	55.985	ENSIPUG00000017680	rbms3	67	54.093	Ictalurus_punctatus
ENSEBUG00000005830	rbms3	83	56.809	ENSSTOG00000006324	RBMS3	68	53.497	Ictidomys_tridecemlineatus
ENSEBUG00000005830	rbms3	83	56.420	ENSJJAG00000014708	Rbms3	63	55.639	Jaculus_jaculus
ENSEBUG00000005830	rbms3	89	54.212	ENSKMAG00000012586	-	75	54.212	Kryptolebias_marmoratus
ENSEBUG00000005830	rbms3	83	56.154	ENSKMAG00000020500	rbms3	60	56.202	Kryptolebias_marmoratus
ENSEBUG00000005830	rbms3	86	55.056	ENSLBEG00000027388	-	67	53.763	Labrus_bergylta
ENSEBUG00000005830	rbms3	83	56.809	ENSLACG00000010581	RBMS3	68	53.521	Latimeria_chalumnae
ENSEBUG00000005830	rbms3	55	47.802	ENSLOCG00000002328	rbms3	62	47.802	Lepisosteus_oculatus
ENSEBUG00000005830	rbms3	83	56.809	ENSLAFG00000000354	RBMS3	65	53.497	Loxodonta_africana
ENSEBUG00000005830	rbms3	83	56.809	ENSMFAG00000033300	RBMS3	68	53.497	Macaca_fascicularis
ENSEBUG00000005830	rbms3	83	56.809	ENSMMUG00000004404	RBMS3	68	53.497	Macaca_mulatta
ENSEBUG00000005830	rbms3	83	56.809	ENSMNEG00000035839	RBMS3	64	56.809	Macaca_nemestrina
ENSEBUG00000005830	rbms3	83	56.809	ENSMLEG00000029464	RBMS3	69	51.171	Mandrillus_leucophaeus
ENSEBUG00000005830	rbms3	84	55.725	ENSMAMG00000024043	rbms3	60	57.258	Mastacembelus_armatus
ENSEBUG00000005830	rbms3	86	55.431	ENSMAMG00000002176	-	62	53.737	Mastacembelus_armatus
ENSEBUG00000005830	rbms3	86	55.472	ENSMZEG00005026469	-	62	54.317	Maylandia_zebra
ENSEBUG00000005830	rbms3	83	55.769	ENSMZEG00005006308	rbms3	62	54.511	Maylandia_zebra
ENSEBUG00000005830	rbms3	83	57.198	ENSMAUG00000016436	Rbms3	70	54.804	Mesocricetus_auratus
ENSEBUG00000005830	rbms3	83	57.031	ENSMICG00000049249	RBMS3	69	51.342	Microcebus_murinus
ENSEBUG00000005830	rbms3	83	56.809	ENSMOCG00000006997	Rbms3	70	54.448	Microtus_ochrogaster
ENSEBUG00000005830	rbms3	86	55.263	ENSMMOG00000015071	-	67	54.122	Mola_mola
ENSEBUG00000005830	rbms3	83	56.154	ENSMMOG00000008471	RBMS3	70	56.154	Mola_mola
ENSEBUG00000005830	rbms3	78	58.848	ENSMODG00000015125	RBMS3	54	58.848	Monodelphis_domestica
ENSEBUG00000005830	rbms3	86	54.851	ENSMALG00000009155	-	67	53.710	Monopterus_albus
ENSEBUG00000005830	rbms3	83	55.769	ENSMALG00000019536	RBMS3	65	56.225	Monopterus_albus
ENSEBUG00000005830	rbms3	83	57.198	MGP_CAROLIEiJ_G0032783	Rbms3	76	73.718	Mus_caroli
ENSEBUG00000005830	rbms3	83	57.198	ENSMUSG00000039607	Rbms3	76	74.359	Mus_musculus
ENSEBUG00000005830	rbms3	83	57.198	MGP_PahariEiJ_G0015650	Rbms3	76	74.359	Mus_pahari
ENSEBUG00000005830	rbms3	83	57.198	MGP_SPRETEiJ_G0033930	Rbms3	76	74.359	Mus_spretus
ENSEBUG00000005830	rbms3	83	56.809	ENSMPUG00000011956	RBMS3	65	53.497	Mustela_putorius_furo
ENSEBUG00000005830	rbms3	83	56.809	ENSMLUG00000000659	RBMS3	68	53.497	Myotis_lucifugus
ENSEBUG00000005830	rbms3	83	56.420	ENSNGAG00000014039	Rbms3	67	54.093	Nannospalax_galili
ENSEBUG00000005830	rbms3	86	55.472	ENSNBRG00000018065	-	67	54.317	Neolamprologus_brichardi
ENSEBUG00000005830	rbms3	83	56.809	ENSNLEG00000004129	RBMS3	69	51.171	Nomascus_leucogenys
ENSEBUG00000005830	rbms3	83	55.642	ENSMEUG00000004772	RBMS3	59	55.642	Notamacropus_eugenii
ENSEBUG00000005830	rbms3	83	56.809	ENSOPRG00000006808	RBMS3	56	53.497	Ochotona_princeps
ENSEBUG00000005830	rbms3	83	56.809	ENSODEG00000003651	RBMS3	67	53.521	Octodon_degus
ENSEBUG00000005830	rbms3	83	55.769	ENSONIG00000007172	rbms3	62	55.769	Oreochromis_niloticus
ENSEBUG00000005830	rbms3	83	56.809	ENSOANG00000010529	RBMS3	65	53.497	Ornithorhynchus_anatinus
ENSEBUG00000005830	rbms3	83	56.809	ENSOCUG00000004840	RBMS3	65	53.497	Oryctolagus_cuniculus
ENSEBUG00000005830	rbms3	89	54.212	ENSORLG00000002306	-	79	54.212	Oryzias_latipes
ENSEBUG00000005830	rbms3	83	56.202	ENSORLG00000005370	RBMS3	71	53.791	Oryzias_latipes
ENSEBUG00000005830	rbms3	83	56.202	ENSORLG00020022674	RBMS3	66	70.732	Oryzias_latipes_hni
ENSEBUG00000005830	rbms3	86	54.887	ENSORLG00020008496	-	67	53.763	Oryzias_latipes_hni
ENSEBUG00000005830	rbms3	86	54.887	ENSORLG00015015719	-	67	53.763	Oryzias_latipes_hsok
ENSEBUG00000005830	rbms3	83	56.202	ENSORLG00015005509	rbms3	64	72.611	Oryzias_latipes_hsok
ENSEBUG00000005830	rbms3	83	56.202	ENSOMEG00000014805	RBMS3	67	55.385	Oryzias_melastigma
ENSEBUG00000005830	rbms3	89	53.846	ENSOMEG00000007677	-	79	53.846	Oryzias_melastigma
ENSEBUG00000005830	rbms3	83	56.809	ENSOARG00000014684	RBMS3	65	53.497	Ovis_aries
ENSEBUG00000005830	rbms3	83	56.809	ENSPPAG00000036519	RBMS3	69	51.342	Pan_paniscus
ENSEBUG00000005830	rbms3	83	56.420	ENSPPRG00000002761	RBMS3	60	56.693	Panthera_pardus
ENSEBUG00000005830	rbms3	83	56.420	ENSPTIG00000011568	RBMS3	63	55.263	Panthera_tigris_altaica
ENSEBUG00000005830	rbms3	83	56.809	ENSPTRG00000014709	RBMS3	68	53.497	Pan_troglodytes
ENSEBUG00000005830	rbms3	83	56.809	ENSPANG00000010234	RBMS3	69	51.171	Papio_anubis
ENSEBUG00000005830	rbms3	50	80.597	ENSPKIG00000016025	-	78	57.205	Paramormyrops_kingsleyae
ENSEBUG00000005830	rbms3	83	56.420	ENSPSIG00000005269	RBMS3	68	52.982	Pelodiscus_sinensis
ENSEBUG00000005830	rbms3	89	54.579	ENSPMGG00000021683	-	66	74.026	Periophthalmus_magnuspinnatus
ENSEBUG00000005830	rbms3	83	55.769	ENSPMGG00000021544	rbms3	67	55.769	Periophthalmus_magnuspinnatus
ENSEBUG00000005830	rbms3	83	57.202	ENSPEMG00000001117	Rbms3	66	54.682	Peromyscus_maniculatus_bairdii
ENSEBUG00000005830	rbms3	83	56.420	ENSPCIG00000006106	RBMS3	67	71.605	Phascolarctos_cinereus
ENSEBUG00000005830	rbms3	83	56.154	ENSPFOG00000017887	rbms3	61	56.154	Poecilia_formosa
ENSEBUG00000005830	rbms3	66	50.935	ENSPLAG00000016866	-	55	50.935	Poecilia_latipinna
ENSEBUG00000005830	rbms3	86	55.263	ENSPMEG00000002993	-	67	54.122	Poecilia_mexicana
ENSEBUG00000005830	rbms3	61	79.747	ENSPMEG00000013853	-	64	79.747	Poecilia_mexicana
ENSEBUG00000005830	rbms3	83	56.154	ENSPREG00000011880	rbms3	72	56.154	Poecilia_reticulata
ENSEBUG00000005830	rbms3	86	55.263	ENSPREG00000018221	-	59	74.026	Poecilia_reticulata
ENSEBUG00000005830	rbms3	83	56.809	ENSPCOG00000017136	RBMS3	69	51.342	Propithecus_coquereli
ENSEBUG00000005830	rbms3	76	54.622	ENSPVAG00000014037	RBMS3	54	54.622	Pteropus_vampyrus
ENSEBUG00000005830	rbms3	86	55.472	ENSPNYG00000012624	-	67	54.317	Pundamilia_nyererei
ENSEBUG00000005830	rbms3	83	55.769	ENSPNYG00000010546	rbms3	69	55.598	Pundamilia_nyererei
ENSEBUG00000005830	rbms3	59	70.000	ENSPNAG00000026763	-	71	70.000	Pygocentrus_nattereri
ENSEBUG00000005830	rbms3	84	55.985	ENSPNAG00000001800	rbms3	70	55.939	Pygocentrus_nattereri
ENSEBUG00000005830	rbms3	83	57.198	ENSRNOG00000025881	Rbms3	70	54.804	Rattus_norvegicus
ENSEBUG00000005830	rbms3	83	56.809	ENSRBIG00000035863	RBMS3	69	51.171	Rhinopithecus_bieti
ENSEBUG00000005830	rbms3	83	56.809	ENSRROG00000027512	RBMS3	73	51.171	Rhinopithecus_roxellana
ENSEBUG00000005830	rbms3	83	56.809	ENSSBOG00000020232	RBMS3	69	51.171	Saimiri_boliviensis_boliviensis
ENSEBUG00000005830	rbms3	83	57.198	ENSSHAG00000002411	RBMS3	71	57.198	Sarcophilus_harrisii
ENSEBUG00000005830	rbms3	89	54.212	ENSSFOG00015008578	rbms3	72	54.212	Scleropages_formosus
ENSEBUG00000005830	rbms3	89	54.545	ENSSMAG00000020065	-	58	73.718	Scophthalmus_maximus
ENSEBUG00000005830	rbms3	83	55.385	ENSSMAG00000004997	rbms3	70	55.385	Scophthalmus_maximus
ENSEBUG00000005830	rbms3	86	55.263	ENSSDUG00000019287	-	67	54.122	Seriola_dumerili
ENSEBUG00000005830	rbms3	83	56.154	ENSSDUG00000013656	RBMS3	69	57.143	Seriola_dumerili
ENSEBUG00000005830	rbms3	86	55.263	ENSSLDG00000013224	-	67	54.122	Seriola_lalandi_dorsalis
ENSEBUG00000005830	rbms3	83	56.154	ENSSLDG00000020276	RBMS3	60	56.154	Seriola_lalandi_dorsalis
ENSEBUG00000005830	rbms3	56	45.652	ENSSPUG00000017197	RBMS3	59	47.093	Sphenodon_punctatus
ENSEBUG00000005830	rbms3	86	55.263	ENSSPAG00000003983	-	63	55.431	Stegastes_partitus
ENSEBUG00000005830	rbms3	83	56.154	ENSSPAG00000020693	rbms3	71	56.154	Stegastes_partitus
ENSEBUG00000005830	rbms3	83	56.420	ENSSSCG00000036381	RBMS3	73	53.147	Sus_scrofa
ENSEBUG00000005830	rbms3	65	50.952	ENSTGUG00000003572	RBMS3	63	50.952	Taeniopygia_guttata
ENSEBUG00000005830	rbms3	83	55.598	ENSTRUG00000021719	RBMS3	60	55.598	Takifugu_rubripes
ENSEBUG00000005830	rbms3	72	53.680	ENSTRUG00000007482	-	61	51.190	Takifugu_rubripes
ENSEBUG00000005830	rbms3	83	56.809	ENSTBEG00000005362	RBMS3	77	53.497	Tupaia_belangeri
ENSEBUG00000005830	rbms3	83	56.809	ENSTTRG00000006202	RBMS3	66	53.497	Tursiops_truncatus
ENSEBUG00000005830	rbms3	83	56.809	ENSUMAG00000000263	RBMS3	72	53.497	Ursus_maritimus
ENSEBUG00000005830	rbms3	78	53.498	ENSVPAG00000003842	RBMS3	69	48.951	Vicugna_pacos
ENSEBUG00000005830	rbms3	83	57.613	ENSVVUG00000004660	RBMS3	64	78.723	Vulpes_vulpes
ENSEBUG00000005830	rbms3	55	45.355	ENSXETG00000032055	RBMS3	59	45.355	Xenopus_tropicalis
ENSEBUG00000005830	rbms3	89	50.000	ENSXCOG00000019600	-	66	50.000	Xiphophorus_couchianus
ENSEBUG00000005830	rbms3	83	55.769	ENSXMAG00000021783	rbms3	72	55.769	Xiphophorus_maculatus
ENSEBUG00000005830	rbms3	86	55.263	ENSXMAG00000014382	-	67	54.122	Xiphophorus_maculatus