EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000005854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 14893 bases
Position: chrFYBX02009007.1:1315936-1330828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009052	zf-C2H2	PF00096.26	1.2e-23	1	4
ENSEBUP00000009052	zf-C2H2	PF00096.26	1.2e-23	2	4
ENSEBUP00000009052	zf-C2H2	PF00096.26	1.2e-23	3	4
ENSEBUP00000009052	zf-C2H2	PF00096.26	1.2e-23	4	4
ENSEBUP00000009069	zf-C2H2	PF00096.26	2.2e-22	1	4
ENSEBUP00000009069	zf-C2H2	PF00096.26	2.2e-22	2	4
ENSEBUP00000009069	zf-C2H2	PF00096.26	2.2e-22	3	4
ENSEBUP00000009069	zf-C2H2	PF00096.26	2.2e-22	4	4
ENSEBUP00000009069	zf-met	PF12874.7	5.8e-11	1	3
ENSEBUP00000009069	zf-met	PF12874.7	5.8e-11	2	3
ENSEBUP00000009069	zf-met	PF12874.7	5.8e-11	3	3
ENSEBUP00000009052	zf-met	PF12874.7	1.1e-10	1	3
ENSEBUP00000009052	zf-met	PF12874.7	1.1e-10	2	3
ENSEBUP00000009052	zf-met	PF12874.7	1.1e-10	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009587	-	4309	-	ENSEBUP00000009069	292 (aa)	-	-
ENSEBUT00000009570	-	4932	-	ENSEBUP00000009052	364 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000005854	-	83	71.429	ENSEBUG00000010205	-	98	72.277
ENSEBUG00000005854	-	83	75.238	ENSEBUG00000011435	-	99	76.238
ENSEBUG00000005854	-	92	80.328	ENSEBUG00000015953	-	95	80.328
ENSEBUG00000005854	-	92	71.287	ENSEBUG00000005264	-	98	72.277
ENSEBUG00000005854	-	59	66.372	ENSEBUG00000009666	-	91	68.571
ENSEBUG00000005854	-	84	66.792	ENSEBUG00000014730	-	92	67.050
ENSEBUG00000005854	-	92	76.852	ENSEBUG00000011896	-	99	76.852
ENSEBUG00000005854	-	92	33.948	ENSEBUG00000016387	-	65	32.616
ENSEBUG00000005854	-	79	80.488	ENSEBUG00000002371	-	95	75.000
ENSEBUG00000005854	-	83	73.585	ENSEBUG00000008306	-	99	74.510
ENSEBUG00000005854	-	93	80.712	ENSEBUG00000004011	-	94	82.090
ENSEBUG00000005854	-	87	73.585	ENSEBUG00000012919	-	99	73.267
ENSEBUG00000005854	-	76	85.294	ENSEBUG00000013157	-	97	85.294
ENSEBUG00000005854	-	83	73.256	ENSEBUG00000005319	-	99	74.257
ENSEBUG00000005854	-	84	65.714	ENSEBUG00000003644	-	99	66.667
ENSEBUG00000005854	-	92	64.444	ENSEBUG00000012775	-	99	64.552
ENSEBUG00000005854	-	92	76.106	ENSEBUG00000007797	-	100	76.577
ENSEBUG00000005854	-	87	76.415	ENSEBUG00000015576	-	95	77.451
ENSEBUG00000005854	-	90	64.634	ENSEBUG00000016688	-	89	65.686
ENSEBUG00000005854	-	94	79.412	ENSEBUG00000007980	-	99	79.412
ENSEBUG00000005854	-	84	66.667	ENSEBUG00000007012	-	100	66.667
ENSEBUG00000005854	-	92	66.667	ENSEBUG00000013355	-	98	66.667
ENSEBUG00000005854	-	59	57.447	ENSEBUG00000011065	-	93	58.333
ENSEBUG00000005854	-	60	68.571	ENSEBUG00000007375	-	97	71.287
ENSEBUG00000005854	-	92	47.475	ENSEBUG00000006032	-	98	57.692
ENSEBUG00000005854	-	52	77.358	ENSEBUG00000012737	-	74	76.923
ENSEBUG00000005854	-	72	72.727	ENSEBUG00000000554	-	97	75.248
ENSEBUG00000005854	-	91	78.689	ENSEBUG00000004999	-	100	78.689
ENSEBUG00000005854	-	59	68.605	ENSEBUG00000015925	-	86	69.048
ENSEBUG00000005854	-	87	69.531	ENSEBUG00000014050	-	98	72.826
ENSEBUG00000005854	-	92	73.333	ENSEBUG00000003590	-	99	74.257
ENSEBUG00000005854	-	84	68.571	ENSEBUG00000000704	-	98	68.571
ENSEBUG00000005854	-	89	73.451	ENSEBUG00000006702	-	98	72.277
ENSEBUG00000005854	-	92	67.257	ENSEBUG00000001121	-	99	71.429
ENSEBUG00000005854	-	95	72.368	ENSEBUG00000017017	-	97	75.000
ENSEBUG00000005854	-	86	75.472	ENSEBUG00000008169	-	98	77.215
ENSEBUG00000005854	-	92	77.358	ENSEBUG00000014040	-	100	79.412
ENSEBUG00000005854	-	92	30.496	ENSEBUG00000009317	-	79	30.961
ENSEBUG00000005854	-	83	69.008	ENSEBUG00000015403	-	100	82.353
ENSEBUG00000005854	-	56	65.031	ENSEBUG00000005816	-	70	65.409
ENSEBUG00000005854	-	72	67.619	ENSEBUG00000002185	-	95	69.307

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005854	-	75	57.009	ENSAPEG00000007389	-	66	54.545	Amphiprion_percula
ENSEBUG00000005854	-	79	47.253	ENSHBUG00000015942	-	53	61.111	Haplochromis_burtoni
ENSEBUG00000005854	-	53	46.078	ENSMZEG00005027937	-	63	46.078	Maylandia_zebra
ENSEBUG00000005854	-	74	51.402	ENSMMOG00000000299	-	90	50.980	Mola_mola
ENSEBUG00000005854	-	61	52.459	ENSMALG00000003975	-	56	51.961	Monopterus_albus
ENSEBUG00000005854	-	65	50.000	ENSMALG00000012155	-	60	52.564	Monopterus_albus
ENSEBUG00000005854	-	53	57.547	ENSNBRG00000000960	-	96	50.526	Neolamprologus_brichardi
ENSEBUG00000005854	-	63	52.066	ENSSPAG00000019049	-	85	54.118	Stegastes_partitus