EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005965 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 86176 bases
Position: chrFYBX02010557.1:1642046-1728221
Accession: ZDB-GENE-040426-1090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009255	RNase_H2-Ydr279	PF09468.10	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009777	-	2826	-	ENSEBUP00000009255	261 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005965	rnaseh2b	97	40.625	ENSG00000136104	RNASEH2B	92	51.724	Homo_sapiens
ENSEBUG00000005965	rnaseh2b	97	40.078	ENSAPOG00000010496	rnaseh2b	83	40.078	Acanthochromis_polyacanthus
ENSEBUG00000005965	rnaseh2b	98	38.077	ENSAMEG00000012040	RNASEH2B	88	37.308	Ailuropoda_melanoleuca
ENSEBUG00000005965	rnaseh2b	100	36.842	ENSACIG00000021991	rnaseh2b	94	35.149	Amphilophus_citrinellus
ENSEBUG00000005965	rnaseh2b	97	39.300	ENSAOCG00000013398	rnaseh2b	83	39.300	Amphiprion_ocellaris
ENSEBUG00000005965	rnaseh2b	97	39.300	ENSAPEG00000006033	rnaseh2b	83	39.300	Amphiprion_percula
ENSEBUG00000005965	rnaseh2b	97	40.234	ENSATEG00000008370	rnaseh2b	83	40.234	Anabas_testudineus
ENSEBUG00000005965	rnaseh2b	94	39.357	ENSAPLG00000008955	RNASEH2B	94	37.838	Anas_platyrhynchos
ENSEBUG00000005965	rnaseh2b	98	42.857	ENSACAG00000011679	RNASEH2B	87	42.857	Anolis_carolinensis
ENSEBUG00000005965	rnaseh2b	98	40.541	ENSANAG00000020662	RNASEH2B	83	39.768	Aotus_nancymaae
ENSEBUG00000005965	rnaseh2b	97	37.109	ENSACLG00000000467	rnaseh2b	83	37.109	Astatotilapia_calliptera
ENSEBUG00000005965	rnaseh2b	98	43.580	ENSAMXG00000014351	rnaseh2b	83	42.023	Astyanax_mexicanus
ENSEBUG00000005965	rnaseh2b	98	39.080	ENSBTAG00000020149	RNASEH2B	84	38.314	Bos_taurus
ENSEBUG00000005965	rnaseh2b	97	40.625	ENSCJAG00000008585	-	84	39.844	Callithrix_jacchus
ENSEBUG00000005965	rnaseh2b	72	40.741	ENSCJAG00000003822	-	69	40.000	Callithrix_jacchus
ENSEBUG00000005965	rnaseh2b	98	37.597	ENSCAFG00000004295	RNASEH2B	83	37.109	Canis_familiaris
ENSEBUG00000005965	rnaseh2b	98	37.597	ENSCAFG00020000250	RNASEH2B	84	37.209	Canis_lupus_dingo
ENSEBUG00000005965	rnaseh2b	98	39.922	ENSCHIG00000018220	RNASEH2B	84	39.147	Capra_hircus
ENSEBUG00000005965	rnaseh2b	89	36.910	ENSCHIG00000012982	-	83	36.481	Capra_hircus
ENSEBUG00000005965	rnaseh2b	98	36.047	ENSTSYG00000031177	-	83	35.271	Carlito_syrichta
ENSEBUG00000005965	rnaseh2b	99	40.530	ENSTSYG00000009176	-	85	39.773	Carlito_syrichta
ENSEBUG00000005965	rnaseh2b	97	36.719	ENSCAPG00000009978	RNASEH2B	86	36.576	Cavia_aperea
ENSEBUG00000005965	rnaseh2b	97	41.473	ENSCPOG00000032527	RNASEH2B	82	40.698	Cavia_porcellus
ENSEBUG00000005965	rnaseh2b	97	40.625	ENSCCAG00000026979	RNASEH2B	84	39.844	Cebus_capucinus
ENSEBUG00000005965	rnaseh2b	95	40.400	ENSCATG00000031336	RNASEH2B	70	39.600	Cercocebus_atys
ENSEBUG00000005965	rnaseh2b	97	41.406	ENSCLAG00000003517	RNASEH2B	70	40.625	Chinchilla_lanigera
ENSEBUG00000005965	rnaseh2b	98	39.615	ENSCSAG00000017701	RNASEH2B	79	38.846	Chlorocebus_sabaeus
ENSEBUG00000005965	rnaseh2b	98	34.231	ENSCHOG00000013688	RNASEH2B	84	33.846	Choloepus_hoffmanni
ENSEBUG00000005965	rnaseh2b	98	42.692	ENSCPBG00000008684	RNASEH2B	79	42.085	Chrysemys_picta_bellii
ENSEBUG00000005965	rnaseh2b	94	33.074	ENSCING00000016454	-	82	32.171	Ciona_intestinalis
ENSEBUG00000005965	rnaseh2b	97	39.922	ENSCANG00000041511	-	82	39.147	Colobus_angolensis_palliatus
ENSEBUG00000005965	rnaseh2b	98	39.535	ENSCGRG00001000611	Rnaseh2b	83	39.147	Cricetulus_griseus_chok1gshd
ENSEBUG00000005965	rnaseh2b	98	39.535	ENSCGRG00000006077	Rnaseh2b	83	39.147	Cricetulus_griseus_crigri
ENSEBUG00000005965	rnaseh2b	99	41.379	ENSCSEG00000004910	rnaseh2b	87	42.915	Cynoglossus_semilaevis
ENSEBUG00000005965	rnaseh2b	98	38.760	ENSCVAG00000005212	rnaseh2b	84	38.760	Cyprinodon_variegatus
ENSEBUG00000005965	rnaseh2b	98	41.085	ENSDARG00000005128	rnaseh2b	84	41.085	Danio_rerio
ENSEBUG00000005965	rnaseh2b	98	36.576	ENSDNOG00000034290	-	83	35.798	Dasypus_novemcinctus
ENSEBUG00000005965	rnaseh2b	98	37.452	ENSDNOG00000049666	-	83	36.822	Dasypus_novemcinctus
ENSEBUG00000005965	rnaseh2b	98	40.154	ENSDORG00000010708	Rnaseh2b	83	39.382	Dipodomys_ordii
ENSEBUG00000005965	rnaseh2b	97	41.406	ENSEASG00005017323	RNASEH2B	82	40.856	Equus_asinus_asinus
ENSEBUG00000005965	rnaseh2b	97	41.797	ENSECAG00000014262	RNASEH2B	82	41.245	Equus_caballus
ENSEBUG00000005965	rnaseh2b	97	40.234	ENSELUG00000019560	rnaseh2b	83	40.392	Esox_lucius
ENSEBUG00000005965	rnaseh2b	95	39.683	ENSFCAG00000014257	RNASEH2B	78	38.800	Felis_catus
ENSEBUG00000005965	rnaseh2b	98	40.154	ENSFALG00000008435	RNASEH2B	87	38.610	Ficedula_albicollis
ENSEBUG00000005965	rnaseh2b	97	40.625	ENSFDAG00000009920	RNASEH2B	89	39.844	Fukomys_damarensis
ENSEBUG00000005965	rnaseh2b	97	40.234	ENSFHEG00000012160	rnaseh2b	83	40.234	Fundulus_heteroclitus
ENSEBUG00000005965	rnaseh2b	97	38.697	ENSGMOG00000016830	rnaseh2b	90	38.697	Gadus_morhua
ENSEBUG00000005965	rnaseh2b	94	40.000	ENSGALG00000017015	RNASEH2B	84	38.462	Gallus_gallus
ENSEBUG00000005965	rnaseh2b	97	37.109	ENSGAFG00000021222	rnaseh2b	83	37.109	Gambusia_affinis
ENSEBUG00000005965	rnaseh2b	97	38.314	ENSGACG00000002821	rnaseh2b	83	38.314	Gasterosteus_aculeatus
ENSEBUG00000005965	rnaseh2b	98	43.629	ENSGAGG00000014722	RNASEH2B	92	42.857	Gopherus_agassizii
ENSEBUG00000005965	rnaseh2b	97	40.310	ENSGGOG00000001044	RNASEH2B	82	39.535	Gorilla_gorilla
ENSEBUG00000005965	rnaseh2b	100	36.842	ENSHBUG00000006049	rnaseh2b	92	36.842	Haplochromis_burtoni
ENSEBUG00000005965	rnaseh2b	97	42.802	ENSHGLG00100015953	RNASEH2B	87	42.023	Heterocephalus_glaber_male
ENSEBUG00000005965	rnaseh2b	96	37.008	ENSHCOG00000003318	rnaseh2b	86	37.398	Hippocampus_comes
ENSEBUG00000005965	rnaseh2b	98	41.085	ENSIPUG00000023815	rnaseh2b	84	41.085	Ictalurus_punctatus
ENSEBUG00000005965	rnaseh2b	98	39.535	ENSSTOG00000015126	RNASEH2B	88	38.760	Ictidomys_tridecemlineatus
ENSEBUG00000005965	rnaseh2b	98	40.541	ENSJJAG00000013335	Rnaseh2b	87	39.382	Jaculus_jaculus
ENSEBUG00000005965	rnaseh2b	97	38.281	ENSKMAG00000002198	rnaseh2b	83	38.281	Kryptolebias_marmoratus
ENSEBUG00000005965	rnaseh2b	97	39.844	ENSLBEG00000019331	rnaseh2b	83	39.844	Labrus_bergylta
ENSEBUG00000005965	rnaseh2b	80	38.889	ENSLACG00000010782	RNASEH2B	89	37.611	Latimeria_chalumnae
ENSEBUG00000005965	rnaseh2b	98	42.802	ENSLOCG00000009296	rnaseh2b	84	42.636	Lepisosteus_oculatus
ENSEBUG00000005965	rnaseh2b	98	38.931	ENSLAFG00000030158	RNASEH2B	83	38.224	Loxodonta_africana
ENSEBUG00000005965	rnaseh2b	97	40.000	ENSMFAG00000038464	-	82	39.216	Macaca_fascicularis
ENSEBUG00000005965	rnaseh2b	97	37.647	ENSMMUG00000021746	RNASEH2B	80	36.863	Macaca_mulatta
ENSEBUG00000005965	rnaseh2b	97	40.000	ENSMNEG00000030580	RNASEH2B	82	39.216	Macaca_nemestrina
ENSEBUG00000005965	rnaseh2b	97	39.689	ENSMLEG00000043911	-	82	38.911	Mandrillus_leucophaeus
ENSEBUG00000005965	rnaseh2b	97	39.062	ENSMAMG00000017109	rnaseh2b	83	39.062	Mastacembelus_armatus
ENSEBUG00000005965	rnaseh2b	99	36.782	ENSMZEG00005021926	rnaseh2b	86	37.023	Maylandia_zebra
ENSEBUG00000005965	rnaseh2b	94	39.600	ENSMGAG00000015025	RNASEH2B	90	38.077	Meleagris_gallopavo
ENSEBUG00000005965	rnaseh2b	98	39.147	ENSMAUG00000016520	Rnaseh2b	83	39.147	Mesocricetus_auratus
ENSEBUG00000005965	rnaseh2b	98	38.760	ENSMICG00000000528	RNASEH2B	83	37.984	Microcebus_murinus
ENSEBUG00000005965	rnaseh2b	97	38.281	ENSMMOG00000019799	rnaseh2b	89	38.281	Mola_mola
ENSEBUG00000005965	rnaseh2b	98	41.538	ENSMODG00000010775	RNASEH2B	84	40.385	Monodelphis_domestica
ENSEBUG00000005965	rnaseh2b	97	39.453	ENSMALG00000004463	rnaseh2b	84	39.453	Monopterus_albus
ENSEBUG00000005965	rnaseh2b	84	38.462	MGP_CAROLIEiJ_G0019389	Rnaseh2b	80	38.009	Mus_caroli
ENSEBUG00000005965	rnaseh2b	98	40.310	ENSMUSG00000021932	Rnaseh2b	83	39.535	Mus_musculus
ENSEBUG00000005965	rnaseh2b	98	30.619	MGP_PahariEiJ_G0030407	-	86	30.392	Mus_pahari
ENSEBUG00000005965	rnaseh2b	72	39.683	ENSMPUG00000018010	RNASEH2B	77	39.459	Mustela_putorius_furo
ENSEBUG00000005965	rnaseh2b	98	39.147	ENSMLUG00000004065	-	83	38.372	Myotis_lucifugus
ENSEBUG00000005965	rnaseh2b	100	36.882	ENSNBRG00000003253	rnaseh2b	87	37.023	Neolamprologus_brichardi
ENSEBUG00000005965	rnaseh2b	97	40.698	ENSNLEG00000003804	RNASEH2B	82	39.922	Nomascus_leucogenys
ENSEBUG00000005965	rnaseh2b	98	41.762	ENSMEUG00000003665	RNASEH2B	89	40.613	Notamacropus_eugenii
ENSEBUG00000005965	rnaseh2b	97	42.188	ENSODEG00000006793	-	83	41.245	Octodon_degus
ENSEBUG00000005965	rnaseh2b	81	37.264	ENSODEG00000005412	-	87	35.849	Octodon_degus
ENSEBUG00000005965	rnaseh2b	97	36.719	ENSONIG00000006657	rnaseh2b	83	36.719	Oreochromis_niloticus
ENSEBUG00000005965	rnaseh2b	98	41.221	ENSOANG00000015537	RNASEH2B	90	40.076	Ornithorhynchus_anatinus
ENSEBUG00000005965	rnaseh2b	100	40.000	ENSOCUG00000008904	RNASEH2B	83	39.623	Oryctolagus_cuniculus
ENSEBUG00000005965	rnaseh2b	97	39.844	ENSORLG00000011850	rnaseh2b	84	39.844	Oryzias_latipes
ENSEBUG00000005965	rnaseh2b	99	40.076	ENSORLG00020012081	rnaseh2b	86	40.076	Oryzias_latipes_hni
ENSEBUG00000005965	rnaseh2b	99	39.695	ENSORLG00015015468	rnaseh2b	86	39.695	Oryzias_latipes_hsok
ENSEBUG00000005965	rnaseh2b	97	39.453	ENSOMEG00000012441	rnaseh2b	84	39.453	Oryzias_melastigma
ENSEBUG00000005965	rnaseh2b	98	40.385	ENSOGAG00000016486	RNASEH2B	87	39.615	Otolemur_garnettii
ENSEBUG00000005965	rnaseh2b	98	39.922	ENSOARG00000008701	RNASEH2B	86	39.147	Ovis_aries
ENSEBUG00000005965	rnaseh2b	97	40.310	ENSPPAG00000026374	RNASEH2B	85	39.535	Pan_paniscus
ENSEBUG00000005965	rnaseh2b	98	38.314	ENSPPRG00000012450	RNASEH2B	85	37.548	Panthera_pardus
ENSEBUG00000005965	rnaseh2b	98	38.314	ENSPTIG00000013918	RNASEH2B	93	37.548	Panthera_tigris_altaica
ENSEBUG00000005965	rnaseh2b	97	40.310	ENSPTRG00000005886	RNASEH2B	94	39.431	Pan_troglodytes
ENSEBUG00000005965	rnaseh2b	97	39.689	ENSPANG00000022424	-	82	38.911	Papio_anubis
ENSEBUG00000005965	rnaseh2b	98	42.802	ENSPKIG00000013386	rnaseh2b	83	42.802	Paramormyrops_kingsleyae
ENSEBUG00000005965	rnaseh2b	58	43.791	ENSPSIG00000002224	RNASEH2B	71	43.791	Pelodiscus_sinensis
ENSEBUG00000005965	rnaseh2b	74	37.949	ENSPMGG00000010299	rnaseh2b	94	37.949	Periophthalmus_magnuspinnatus
ENSEBUG00000005965	rnaseh2b	98	38.760	ENSPEMG00000019721	Rnaseh2b	83	38.372	Peromyscus_maniculatus_bairdii
ENSEBUG00000005965	rnaseh2b	79	43.269	ENSPCIG00000014535	-	63	44.624	Phascolarctos_cinereus
ENSEBUG00000005965	rnaseh2b	97	38.760	ENSPFOG00000016722	rnaseh2b	83	38.760	Poecilia_formosa
ENSEBUG00000005965	rnaseh2b	97	38.281	ENSPLAG00000011755	rnaseh2b	83	38.281	Poecilia_latipinna
ENSEBUG00000005965	rnaseh2b	97	38.281	ENSPMEG00000002721	rnaseh2b	83	38.281	Poecilia_mexicana
ENSEBUG00000005965	rnaseh2b	97	37.891	ENSPREG00000007737	rnaseh2b	83	37.891	Poecilia_reticulata
ENSEBUG00000005965	rnaseh2b	97	40.310	ENSPPYG00000005378	RNASEH2B	82	39.535	Pongo_abelii
ENSEBUG00000005965	rnaseh2b	98	39.535	ENSPCOG00000026623	RNASEH2B	83	38.760	Propithecus_coquereli
ENSEBUG00000005965	rnaseh2b	86	37.168	ENSPVAG00000000508	RNASEH2B	85	36.283	Pteropus_vampyrus
ENSEBUG00000005965	rnaseh2b	100	36.842	ENSPNYG00000013552	rnaseh2b	92	36.842	Pundamilia_nyererei
ENSEBUG00000005965	rnaseh2b	98	40.310	ENSPNAG00000024825	rnaseh2b	84	40.310	Pygocentrus_nattereri
ENSEBUG00000005965	rnaseh2b	98	39.147	ENSRNOG00000009192	Rnaseh2b	83	38.372	Rattus_norvegicus
ENSEBUG00000005965	rnaseh2b	97	37.891	ENSRBIG00000036017	-	83	37.109	Rhinopithecus_bieti
ENSEBUG00000005965	rnaseh2b	97	39.844	ENSRBIG00000028928	-	82	39.453	Rhinopithecus_bieti
ENSEBUG00000005965	rnaseh2b	72	37.566	ENSRROG00000044915	-	69	37.297	Rhinopithecus_roxellana
ENSEBUG00000005965	rnaseh2b	97	39.844	ENSRROG00000018808	-	82	39.453	Rhinopithecus_roxellana
ENSEBUG00000005965	rnaseh2b	97	40.234	ENSSBOG00000008081	RNASEH2B	91	39.453	Saimiri_boliviensis_boliviensis
ENSEBUG00000005965	rnaseh2b	98	41.923	ENSSHAG00000016190	RNASEH2B	84	40.769	Sarcophilus_harrisii
ENSEBUG00000005965	rnaseh2b	98	41.085	ENSSFOG00015010190	rnaseh2b	84	41.085	Scleropages_formosus
ENSEBUG00000005965	rnaseh2b	97	40.157	ENSSMAG00000001546	rnaseh2b	83	40.157	Scophthalmus_maximus
ENSEBUG00000005965	rnaseh2b	97	39.844	ENSSDUG00000007567	rnaseh2b	83	39.844	Seriola_dumerili
ENSEBUG00000005965	rnaseh2b	99	38.931	ENSSLDG00000012485	rnaseh2b	87	38.931	Seriola_lalandi_dorsalis
ENSEBUG00000005965	rnaseh2b	98	38.462	ENSSPUG00000006745	-	93	38.462	Sphenodon_punctatus
ENSEBUG00000005965	rnaseh2b	97	40.234	ENSSPAG00000020926	rnaseh2b	83	40.234	Stegastes_partitus
ENSEBUG00000005965	rnaseh2b	98	39.535	ENSSSCG00000024385	RNASEH2B	95	39.184	Sus_scrofa
ENSEBUG00000005965	rnaseh2b	98	40.154	ENSTGUG00000012104	RNASEH2B	94	38.996	Taeniopygia_guttata
ENSEBUG00000005965	rnaseh2b	97	40.000	ENSTRUG00000015098	rnaseh2b	83	39.844	Takifugu_rubripes
ENSEBUG00000005965	rnaseh2b	98	40.927	ENSTNIG00000013861	rnaseh2b	84	40.927	Tetraodon_nigroviridis
ENSEBUG00000005965	rnaseh2b	98	33.846	ENSTTRG00000010761	RNASEH2B	84	33.846	Tursiops_truncatus
ENSEBUG00000005965	rnaseh2b	98	38.760	ENSUAMG00000022849	RNASEH2B	92	37.984	Ursus_americanus
ENSEBUG00000005965	rnaseh2b	98	38.372	ENSUMAG00000018556	RNASEH2B	92	37.597	Ursus_maritimus
ENSEBUG00000005965	rnaseh2b	98	40.310	ENSVPAG00000005679	RNASEH2B	89	39.535	Vicugna_pacos
ENSEBUG00000005965	rnaseh2b	98	38.224	ENSVVUG00000024015	RNASEH2B	77	37.838	Vulpes_vulpes
ENSEBUG00000005965	rnaseh2b	97	42.857	ENSXETG00000020720	rnaseh2b	83	42.085	Xenopus_tropicalis
ENSEBUG00000005965	rnaseh2b	97	38.132	ENSXCOG00000018732	rnaseh2b	87	37.891	Xiphophorus_couchianus
ENSEBUG00000005965	rnaseh2b	97	37.500	ENSXMAG00000022554	rnaseh2b	83	37.500	Xiphophorus_maculatus