EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 80893 bases
Position: chrFYBX02010123.1:4133209-4214101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009300	Ribonuclease_3	PF00636.26	2.3e-43	1	2
ENSEBUP00000009300	Ribonuclease_3	PF00636.26	2.3e-43	2	2
ENSEBUP00000009271	Ribonuclease_3	PF00636.26	2.8e-43	1	2
ENSEBUP00000009271	Ribonuclease_3	PF00636.26	2.8e-43	2	2
ENSEBUP00000009300	dsrm	PF00035.26	2.4e-14	1	1
ENSEBUP00000009300	Ribonucleas_3_3	PF14622.6	1.7e-47	1	2
ENSEBUP00000009300	Ribonucleas_3_3	PF14622.6	1.7e-47	2	2
ENSEBUP00000009271	Ribonucleas_3_3	PF14622.6	1.7e-47	1	2
ENSEBUP00000009271	Ribonucleas_3_3	PF14622.6	1.7e-47	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009792	-	4343	-	ENSEBUP00000009271	674 (aa)	-	-
ENSEBUT00000009822	-	4267	-	ENSEBUP00000009300	682 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005974	-	99	82.474	ENSG00000113360	DROSHA	51	82.474	Homo_sapiens
ENSEBUG00000005974	-	65	79.469	ENSAPOG00000002761	-	69	79.469	Acanthochromis_polyacanthus
ENSEBUG00000005974	-	99	82.474	ENSAMEG00000006000	DROSHA	50	82.474	Ailuropoda_melanoleuca
ENSEBUG00000005974	-	98	83.084	ENSACIG00000019308	drosha	67	82.085	Amphilophus_citrinellus
ENSEBUG00000005974	-	98	82.934	ENSATEG00000021939	drosha	52	81.938	Anabas_testudineus
ENSEBUG00000005974	-	99	81.738	ENSAPLG00000004372	DROSHA	50	81.738	Anas_platyrhynchos
ENSEBUG00000005974	-	99	78.498	ENSANAG00000020506	DROSHA	66	78.498	Aotus_nancymaae
ENSEBUG00000005974	-	98	82.635	ENSACLG00000012227	drosha	51	81.645	Astatotilapia_calliptera
ENSEBUG00000005974	-	98	80.804	ENSAMXG00000005582	drosha	52	82.154	Astyanax_mexicanus
ENSEBUG00000005974	-	99	82.327	ENSBTAG00000017551	DROSHA	52	82.327	Bos_taurus
ENSEBUG00000005974	-	96	37.670	WBGene00009163	drsh-1	59	37.670	Caenorhabditis_elegans
ENSEBUG00000005974	-	99	82.474	ENSCJAG00000018881	DROSHA	50	82.474	Callithrix_jacchus
ENSEBUG00000005974	-	90	83.524	ENSCAFG00000018939	-	98	83.524	Canis_familiaris
ENSEBUG00000005974	-	99	82.474	ENSCAFG00020017559	DROSHA	94	82.635	Canis_lupus_dingo
ENSEBUG00000005974	-	99	82.327	ENSCHIG00000022226	DROSHA	52	82.327	Capra_hircus
ENSEBUG00000005974	-	77	79.507	ENSCAPG00000015787	-	97	79.507	Cavia_aperea
ENSEBUG00000005974	-	99	82.474	ENSCPOG00000015051	DROSHA	52	82.474	Cavia_porcellus
ENSEBUG00000005974	-	99	82.474	ENSCCAG00000027283	DROSHA	66	82.474	Cebus_capucinus
ENSEBUG00000005974	-	99	82.474	ENSCATG00000016833	DROSHA	66	80.560	Cercocebus_atys
ENSEBUG00000005974	-	99	82.474	ENSCLAG00000013048	DROSHA	51	82.474	Chinchilla_lanigera
ENSEBUG00000005974	-	99	82.032	ENSCPBG00000000467	DROSHA	51	82.032	Chrysemys_picta_bellii
ENSEBUG00000005974	-	75	58.636	ENSCING00000001525	-	98	58.636	Ciona_intestinalis
ENSEBUG00000005974	-	98	57.227	ENSCSAVG00000010638	-	81	57.227	Ciona_savignyi
ENSEBUG00000005974	-	99	82.474	ENSCANG00000035071	DROSHA	67	80.560	Colobus_angolensis_palliatus
ENSEBUG00000005974	-	98	81.696	ENSCSEG00000001452	drosha	50	80.910	Cynoglossus_semilaevis
ENSEBUG00000005974	-	98	83.084	ENSCVAG00000004619	drosha	51	82.085	Cyprinodon_variegatus
ENSEBUG00000005974	-	98	82.485	ENSDARG00000055563	drosha	53	81.498	Danio_rerio
ENSEBUG00000005974	-	99	82.474	ENSDNOG00000001537	DROSHA	50	82.474	Dasypus_novemcinctus
ENSEBUG00000005974	-	99	82.327	ENSDORG00000005624	Drosha	52	82.327	Dipodomys_ordii
ENSEBUG00000005974	-	99	57.287	FBgn0026722	drosha	52	57.287	Drosophila_melanogaster
ENSEBUG00000005974	-	99	82.474	ENSEASG00005007149	DROSHA	52	82.474	Equus_asinus_asinus
ENSEBUG00000005974	-	99	82.474	ENSECAG00000013578	DROSHA	51	82.474	Equus_caballus
ENSEBUG00000005974	-	99	82.474	ENSFCAG00000000360	DROSHA	52	82.474	Felis_catus
ENSEBUG00000005974	-	99	81.296	ENSFALG00000012843	DROSHA	50	81.296	Ficedula_albicollis
ENSEBUG00000005974	-	99	82.474	ENSFDAG00000018414	DROSHA	51	82.474	Fukomys_damarensis
ENSEBUG00000005974	-	99	81.738	ENSGALG00000012916	DROSHA	51	81.738	Gallus_gallus
ENSEBUG00000005974	-	98	82.635	ENSGAFG00000016853	drosha	52	81.645	Gambusia_affinis
ENSEBUG00000005974	-	99	82.032	ENSGAGG00000005621	DROSHA	51	82.032	Gopherus_agassizii
ENSEBUG00000005974	-	99	82.474	ENSGGOG00000011006	DROSHA	66	80.707	Gorilla_gorilla
ENSEBUG00000005974	-	99	82.474	ENSHGLG00000018873	DROSHA	50	82.474	Heterocephalus_glaber_female
ENSEBUG00000005974	-	99	82.474	ENSHGLG00100015793	DROSHA	50	82.474	Heterocephalus_glaber_male
ENSEBUG00000005974	-	98	82.292	ENSHCOG00000008454	drosha	57	81.498	Hippocampus_comes
ENSEBUG00000005974	-	98	78.125	ENSIPUG00000021202	drosha	52	77.386	Ictalurus_punctatus
ENSEBUG00000005974	-	99	82.474	ENSSTOG00000016323	DROSHA	97	82.922	Ictidomys_tridecemlineatus
ENSEBUG00000005974	-	99	82.622	ENSJJAG00000019758	Drosha	50	82.622	Jaculus_jaculus
ENSEBUG00000005974	-	98	81.587	ENSLBEG00000006606	drosha	53	80.617	Labrus_bergylta
ENSEBUG00000005974	-	99	81.938	ENSLACG00000005937	DROSHA	51	81.938	Latimeria_chalumnae
ENSEBUG00000005974	-	98	82.493	ENSLOCG00000012852	drosha	51	79.659	Lepisosteus_oculatus
ENSEBUG00000005974	-	99	82.327	ENSLAFG00000013831	DROSHA	55	82.327	Loxodonta_africana
ENSEBUG00000005974	-	99	82.474	ENSMFAG00000003055	DROSHA	50	82.474	Macaca_fascicularis
ENSEBUG00000005974	-	99	82.474	ENSMMUG00000012193	DROSHA	66	82.474	Macaca_mulatta
ENSEBUG00000005974	-	99	82.474	ENSMNEG00000037529	DROSHA	50	82.474	Macaca_nemestrina
ENSEBUG00000005974	-	98	83.084	ENSMAMG00000012613	drosha	67	82.239	Mastacembelus_armatus
ENSEBUG00000005974	-	98	82.635	ENSMZEG00005019487	drosha	51	81.645	Maylandia_zebra
ENSEBUG00000005974	-	99	81.591	ENSMGAG00000005087	DROSHA	51	81.591	Meleagris_gallopavo
ENSEBUG00000005974	-	99	79.854	ENSMICG00000002241	DROSHA	66	79.854	Microcebus_murinus
ENSEBUG00000005974	-	99	82.327	ENSMOCG00000015044	Drosha	50	82.327	Microtus_ochrogaster
ENSEBUG00000005974	-	98	77.695	ENSMMOG00000004016	drosha	66	76.799	Mola_mola
ENSEBUG00000005974	-	99	79.772	ENSMODG00000004807	DROSHA	51	79.772	Monodelphis_domestica
ENSEBUG00000005974	-	98	82.934	ENSMALG00000010542	drosha	51	81.938	Monopterus_albus
ENSEBUG00000005974	-	99	82.327	MGP_CAROLIEiJ_G0019687	Drosha	67	82.327	Mus_caroli
ENSEBUG00000005974	-	99	82.327	MGP_PahariEiJ_G0016063	Drosha	67	82.327	Mus_pahari
ENSEBUG00000005974	-	99	82.474	MGP_SPRETEiJ_G0020580	Drosha	67	82.474	Mus_spretus
ENSEBUG00000005974	-	98	69.208	ENSNBRG00000001870	drosha	69	68.475	Neolamprologus_brichardi
ENSEBUG00000005974	-	99	82.474	ENSNLEG00000013963	DROSHA	66	80.560	Nomascus_leucogenys
ENSEBUG00000005974	-	99	66.763	ENSOANG00000015744	-	88	66.763	Ornithorhynchus_anatinus
ENSEBUG00000005974	-	99	82.474	ENSOCUG00000000367	DROSHA	50	82.474	Oryctolagus_cuniculus
ENSEBUG00000005974	-	98	81.737	ENSORLG00000013592	drosha	52	80.764	Oryzias_latipes
ENSEBUG00000005974	-	98	80.240	ENSORLG00020002854	drosha	66	79.295	Oryzias_latipes_hni
ENSEBUG00000005974	-	98	81.587	ENSORLG00015003156	drosha	67	80.617	Oryzias_latipes_hsok
ENSEBUG00000005974	-	98	82.186	ENSOMEG00000001062	drosha	52	81.204	Oryzias_melastigma
ENSEBUG00000005974	-	99	82.353	ENSOGAG00000005424	DROSHA	55	82.353	Otolemur_garnettii
ENSEBUG00000005974	-	99	82.474	ENSPPAG00000037526	DROSHA	66	79.265	Pan_paniscus
ENSEBUG00000005974	-	99	82.474	ENSPPRG00000002687	DROSHA	51	82.474	Panthera_pardus
ENSEBUG00000005974	-	99	82.474	ENSPTIG00000017523	DROSHA	51	82.474	Panthera_tigris_altaica
ENSEBUG00000005974	-	99	82.474	ENSPTRG00000016762	DROSHA	52	82.474	Pan_troglodytes
ENSEBUG00000005974	-	99	82.474	ENSPANG00000003027	DROSHA	50	82.474	Papio_anubis
ENSEBUG00000005974	-	98	82.784	ENSPKIG00000011514	drosha	51	81.791	Paramormyrops_kingsleyae
ENSEBUG00000005974	-	65	80.357	ENSPMGG00000016027	drosha	92	80.357	Periophthalmus_magnuspinnatus
ENSEBUG00000005974	-	99	82.474	ENSPCIG00000006010	DROSHA	50	82.474	Phascolarctos_cinereus
ENSEBUG00000005974	-	98	82.635	ENSPREG00000022302	drosha	53	81.645	Poecilia_reticulata
ENSEBUG00000005974	-	99	80.118	ENSPCOG00000028511	DROSHA	66	80.118	Propithecus_coquereli
ENSEBUG00000005974	-	98	82.635	ENSPNYG00000000398	drosha	67	80.000	Pundamilia_nyererei
ENSEBUG00000005974	-	98	82.143	ENSPNAG00000011876	drosha	56	81.351	Pygocentrus_nattereri
ENSEBUG00000005974	-	99	82.206	ENSRBIG00000032786	DROSHA	67	79.295	Rhinopithecus_bieti
ENSEBUG00000005974	-	99	82.474	ENSRROG00000028199	DROSHA	51	82.474	Rhinopithecus_roxellana
ENSEBUG00000005974	-	99	82.474	ENSSBOG00000024008	DROSHA	66	79.971	Saimiri_boliviensis_boliviensis
ENSEBUG00000005974	-	99	82.258	ENSSHAG00000015198	DROSHA	66	82.258	Sarcophilus_harrisii
ENSEBUG00000005974	-	98	80.689	ENSSFOG00015009776	drosha	54	79.736	Scleropages_formosus
ENSEBUG00000005974	-	98	82.485	ENSSMAG00000008069	drosha	50	82.462	Scophthalmus_maximus
ENSEBUG00000005974	-	98	82.635	ENSSDUG00000010944	drosha	67	81.645	Seriola_dumerili
ENSEBUG00000005974	-	98	82.485	ENSSLDG00000025271	drosha	67	81.498	Seriola_lalandi_dorsalis
ENSEBUG00000005974	-	99	81.591	ENSSPUG00000006902	DROSHA	52	81.591	Sphenodon_punctatus
ENSEBUG00000005974	-	99	82.327	ENSSSCG00000016809	DROSHA	52	82.327	Sus_scrofa
ENSEBUG00000005974	-	99	80.588	ENSTGUG00000001955	DROSHA	50	80.588	Taeniopygia_guttata
ENSEBUG00000005974	-	90	80.395	ENSTRUG00000017778	drosha	50	77.323	Takifugu_rubripes
ENSEBUG00000005974	-	99	80.876	ENSTNIG00000008688	drosha	67	80.876	Tetraodon_nigroviridis
ENSEBUG00000005974	-	99	82.474	ENSUAMG00000025257	DROSHA	51	82.474	Ursus_americanus
ENSEBUG00000005974	-	99	82.474	ENSUMAG00000014097	DROSHA	93	82.635	Ursus_maritimus
ENSEBUG00000005974	-	99	77.761	ENSVPAG00000011260	DROSHA	61	77.761	Vicugna_pacos
ENSEBUG00000005974	-	99	82.474	ENSVVUG00000022212	DROSHA	96	82.635	Vulpes_vulpes
ENSEBUG00000005974	-	99	79.063	ENSXETG00000016701	drosha	50	79.063	Xenopus_tropicalis
ENSEBUG00000005974	-	57	80.818	ENSXCOG00000015325	drosha	82	79.404	Xiphophorus_couchianus