EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000005998 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 49373 bases
Position: chrFYBX02009839.1:4562859-4612231
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009307	efThoc1	PF11957.8	3.3e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000009829	-	2663	-	ENSEBUP00000009307	609 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000005998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000005998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000005998	thoc1	98	65.449	ENSG00000079134	THOC1	99	70.370	Homo_sapiens
ENSEBUG00000005998	thoc1	98	66.279	ENSAMEG00000006645	THOC1	91	64.950	Ailuropoda_melanoleuca
ENSEBUG00000005998	thoc1	98	63.455	ENSACIG00000019392	thoc1	93	62.687	Amphilophus_citrinellus
ENSEBUG00000005998	thoc1	98	61.897	ENSAOCG00000008391	thoc1	92	61.130	Amphiprion_ocellaris
ENSEBUG00000005998	thoc1	98	64.179	ENSAPEG00000001093	thoc1	92	63.411	Amphiprion_percula
ENSEBUG00000005998	thoc1	98	63.847	ENSATEG00000004783	thoc1	92	63.079	Anabas_testudineus
ENSEBUG00000005998	thoc1	99	66.885	ENSAPLG00000016149	THOC1	92	65.410	Anas_platyrhynchos
ENSEBUG00000005998	thoc1	99	66.013	ENSACAG00000008307	THOC1	90	64.542	Anolis_carolinensis
ENSEBUG00000005998	thoc1	98	64.860	ENSANAG00000033200	THOC1	92	63.547	Aotus_nancymaae
ENSEBUG00000005998	thoc1	97	64.942	ENSACLG00000016836	thoc1	92	64.167	Astatotilapia_calliptera
ENSEBUG00000005998	thoc1	98	60.621	ENSAMXG00000014708	thoc1	95	59.477	Astyanax_mexicanus
ENSEBUG00000005998	thoc1	98	65.615	ENSBTAG00000019215	THOC1	92	64.286	Bos_taurus
ENSEBUG00000005998	thoc1	79	33.399	WBGene00020172	thoc-1	65	36.054	Caenorhabditis_elegans
ENSEBUG00000005998	thoc1	98	65.615	ENSCJAG00000020450	THOC1	92	64.286	Callithrix_jacchus
ENSEBUG00000005998	thoc1	98	66.279	ENSCAFG00000018324	THOC1	92	64.950	Canis_familiaris
ENSEBUG00000005998	thoc1	98	66.279	ENSCAFG00020017894	THOC1	92	64.950	Canis_lupus_dingo
ENSEBUG00000005998	thoc1	98	65.615	ENSCHIG00000015399	THOC1	94	64.286	Capra_hircus
ENSEBUG00000005998	thoc1	98	65.615	ENSTSYG00000010585	THOC1	91	64.286	Carlito_syrichta
ENSEBUG00000005998	thoc1	98	46.281	ENSCAPG00000016270	THOC1	92	47.619	Cavia_aperea
ENSEBUG00000005998	thoc1	98	66.113	ENSCPOG00000000959	THOC1	92	64.784	Cavia_porcellus
ENSEBUG00000005998	thoc1	98	65.615	ENSCCAG00000025766	THOC1	92	64.286	Cebus_capucinus
ENSEBUG00000005998	thoc1	98	63.123	ENSCATG00000028180	THOC1	87	74.760	Cercocebus_atys
ENSEBUG00000005998	thoc1	98	65.781	ENSCLAG00000009117	THOC1	94	64.452	Chinchilla_lanigera
ENSEBUG00000005998	thoc1	98	65.615	ENSCSAG00000017631	THOC1	92	64.286	Chlorocebus_sabaeus
ENSEBUG00000005998	thoc1	84	72.016	ENSCHOG00000010609	THOC1	78	72.016	Choloepus_hoffmanni
ENSEBUG00000005998	thoc1	99	65.954	ENSCPBG00000027558	THOC1	93	64.474	Chrysemys_picta_bellii
ENSEBUG00000005998	thoc1	71	51.345	ENSCING00000007663	-	89	51.345	Ciona_intestinalis
ENSEBUG00000005998	thoc1	97	46.104	ENSCSAVG00000010649	-	97	46.104	Ciona_savignyi
ENSEBUG00000005998	thoc1	98	65.449	ENSCANG00000034265	THOC1	88	74.760	Colobus_angolensis_palliatus
ENSEBUG00000005998	thoc1	98	65.615	ENSCGRG00001016464	Thoc1	91	64.286	Cricetulus_griseus_chok1gshd
ENSEBUG00000005998	thoc1	98	65.615	ENSCGRG00000010269	-	94	64.286	Cricetulus_griseus_crigri
ENSEBUG00000005998	thoc1	95	53.253	ENSCGRG00000003390	-	97	51.884	Cricetulus_griseus_crigri
ENSEBUG00000005998	thoc1	98	63.072	ENSCSEG00000012486	thoc1	98	61.688	Cynoglossus_semilaevis
ENSEBUG00000005998	thoc1	98	63.350	ENSCVAG00000020600	thoc1	92	62.687	Cyprinodon_variegatus
ENSEBUG00000005998	thoc1	98	64.570	ENSDARG00000088246	thoc1	92	63.245	Danio_rerio
ENSEBUG00000005998	thoc1	98	66.279	ENSDNOG00000019217	THOC1	92	64.950	Dasypus_novemcinctus
ENSEBUG00000005998	thoc1	99	62.149	ENSDORG00000008060	Thoc1	94	60.826	Dipodomys_ordii
ENSEBUG00000005998	thoc1	80	43.495	FBgn0037382	Hpr1	68	43.529	Drosophila_melanogaster
ENSEBUG00000005998	thoc1	87	51.880	ENSETEG00000004165	THOC1	86	53.529	Echinops_telfairi
ENSEBUG00000005998	thoc1	98	65.947	ENSEASG00005002549	THOC1	88	64.618	Equus_asinus_asinus
ENSEBUG00000005998	thoc1	98	66.113	ENSECAG00000009267	THOC1	82	64.784	Equus_caballus
ENSEBUG00000005998	thoc1	79	51.429	ENSEEUG00000012214	-	76	51.429	Erinaceus_europaeus
ENSEBUG00000005998	thoc1	97	64.618	ENSELUG00000023277	thoc1	91	63.123	Esox_lucius
ENSEBUG00000005998	thoc1	98	65.947	ENSFCAG00000022454	THOC1	80	64.618	Felis_catus
ENSEBUG00000005998	thoc1	99	65.635	ENSFALG00000006205	THOC1	95	64.332	Ficedula_albicollis
ENSEBUG00000005998	thoc1	98	65.781	ENSFDAG00000006842	THOC1	93	64.452	Fukomys_damarensis
ENSEBUG00000005998	thoc1	97	63.272	ENSFHEG00000008841	thoc1	92	62.604	Fundulus_heteroclitus
ENSEBUG00000005998	thoc1	98	63.184	ENSGMOG00000011486	thoc1	92	62.521	Gadus_morhua
ENSEBUG00000005998	thoc1	99	66.612	ENSGALG00000014915	THOC1	92	64.448	Gallus_gallus
ENSEBUG00000005998	thoc1	97	64.060	ENSGAFG00000021464	thoc1	92	63.289	Gambusia_affinis
ENSEBUG00000005998	thoc1	97	64.441	ENSGACG00000017361	thoc1	83	74.522	Gasterosteus_aculeatus
ENSEBUG00000005998	thoc1	99	66.118	ENSGAGG00000021230	-	90	64.638	Gopherus_agassizii
ENSEBUG00000005998	thoc1	98	65.615	ENSGGOG00000003013	THOC1	91	64.286	Gorilla_gorilla
ENSEBUG00000005998	thoc1	97	65.109	ENSHBUG00000009096	thoc1	92	64.333	Haplochromis_burtoni
ENSEBUG00000005998	thoc1	73	64.000	ENSHGLG00000009264	-	98	64.000	Heterocephalus_glaber_female
ENSEBUG00000005998	thoc1	98	65.947	ENSHGLG00000003712	-	92	64.618	Heterocephalus_glaber_female
ENSEBUG00000005998	thoc1	98	65.781	ENSHGLG00100003570	THOC1	92	64.452	Heterocephalus_glaber_male
ENSEBUG00000005998	thoc1	75	64.000	ENSHGLG00100002225	-	98	64.000	Heterocephalus_glaber_male
ENSEBUG00000005998	thoc1	85	63.269	ENSIPUG00000005306	thoc1	90	61.923	Ictalurus_punctatus
ENSEBUG00000005998	thoc1	98	65.615	ENSSTOG00000006484	THOC1	92	64.286	Ictidomys_tridecemlineatus
ENSEBUG00000005998	thoc1	51	70.927	ENSJJAG00000014893	-	88	70.927	Jaculus_jaculus
ENSEBUG00000005998	thoc1	98	63.350	ENSKMAG00000003904	thoc1	92	62.417	Kryptolebias_marmoratus
ENSEBUG00000005998	thoc1	98	63.682	ENSLBEG00000020372	thoc1	90	62.748	Labrus_bergylta
ENSEBUG00000005998	thoc1	99	67.599	ENSLACG00000014869	THOC1	93	65.954	Latimeria_chalumnae
ENSEBUG00000005998	thoc1	98	65.066	ENSLOCG00000002097	thoc1	92	63.184	Lepisosteus_oculatus
ENSEBUG00000005998	thoc1	98	66.611	ENSLAFG00000009585	THOC1	92	65.282	Loxodonta_africana
ENSEBUG00000005998	thoc1	98	65.615	ENSMFAG00000041520	THOC1	91	64.286	Macaca_fascicularis
ENSEBUG00000005998	thoc1	98	65.615	ENSMMUG00000004662	THOC1	92	64.286	Macaca_mulatta
ENSEBUG00000005998	thoc1	98	65.615	ENSMNEG00000040177	THOC1	91	64.286	Macaca_nemestrina
ENSEBUG00000005998	thoc1	98	65.615	ENSMLEG00000034201	THOC1	91	64.286	Mandrillus_leucophaeus
ENSEBUG00000005998	thoc1	98	63.516	ENSMAMG00000016747	thoc1	96	62.355	Mastacembelus_armatus
ENSEBUG00000005998	thoc1	97	64.942	ENSMZEG00005024609	thoc1	92	64.167	Maylandia_zebra
ENSEBUG00000005998	thoc1	99	66.448	ENSMGAG00000009811	THOC1	95	65.139	Meleagris_gallopavo
ENSEBUG00000005998	thoc1	98	65.672	ENSMAUG00000010272	Thoc1	92	64.345	Mesocricetus_auratus
ENSEBUG00000005998	thoc1	98	66.113	ENSMICG00000027200	THOC1	92	64.784	Microcebus_murinus
ENSEBUG00000005998	thoc1	98	65.174	ENSMOCG00000014536	-	79	63.847	Microtus_ochrogaster
ENSEBUG00000005998	thoc1	97	58.893	ENSMOCG00000014924	-	89	57.550	Microtus_ochrogaster
ENSEBUG00000005998	thoc1	98	62.562	ENSMMOG00000011772	thoc1	99	61.794	Mola_mola
ENSEBUG00000005998	thoc1	98	65.686	ENSMODG00000021482	THOC1	92	64.379	Monodelphis_domestica
ENSEBUG00000005998	thoc1	98	64.842	ENSMALG00000021872	thoc1	96	60.331	Monopterus_albus
ENSEBUG00000005998	thoc1	98	65.340	MGP_CAROLIEiJ_G0021989	Thoc1	92	64.013	Mus_caroli
ENSEBUG00000005998	thoc1	98	65.340	ENSMUSG00000024287	Thoc1	98	72.464	Mus_musculus
ENSEBUG00000005998	thoc1	98	65.340	MGP_PahariEiJ_G0018726	Thoc1	92	64.013	Mus_pahari
ENSEBUG00000005998	thoc1	98	65.340	MGP_SPRETEiJ_G0022905	Thoc1	92	64.013	Mus_spretus
ENSEBUG00000005998	thoc1	98	66.279	ENSMPUG00000005448	THOC1	92	64.950	Mustela_putorius_furo
ENSEBUG00000005998	thoc1	81	67.475	ENSMLUG00000027965	-	82	67.010	Myotis_lucifugus
ENSEBUG00000005998	thoc1	57	65.130	ENSMLUG00000024912	-	87	65.130	Myotis_lucifugus
ENSEBUG00000005998	thoc1	98	65.340	ENSMLUG00000004090	-	92	64.013	Myotis_lucifugus
ENSEBUG00000005998	thoc1	98	65.615	ENSNGAG00000001401	-	92	64.286	Nannospalax_galili
ENSEBUG00000005998	thoc1	99	52.303	ENSNGAG00000008061	-	93	50.987	Nannospalax_galili
ENSEBUG00000005998	thoc1	97	64.154	ENSNBRG00000005991	thoc1	91	63.378	Neolamprologus_brichardi
ENSEBUG00000005998	thoc1	98	65.615	ENSNLEG00000006835	THOC1	92	64.286	Nomascus_leucogenys
ENSEBUG00000005998	thoc1	71	73.733	ENSMEUG00000009756	THOC1	68	73.733	Notamacropus_eugenii
ENSEBUG00000005998	thoc1	98	51.495	ENSOPRG00000001108	THOC1	91	50.166	Ochotona_princeps
ENSEBUG00000005998	thoc1	98	61.231	ENSODEG00000006623	THOC1	91	59.900	Octodon_degus
ENSEBUG00000005998	thoc1	97	64.942	ENSONIG00000009440	thoc1	91	64.167	Oreochromis_niloticus
ENSEBUG00000005998	thoc1	98	66.113	ENSOCUG00000011601	THOC1	92	64.784	Oryctolagus_cuniculus
ENSEBUG00000005998	thoc1	97	64.441	ENSORLG00000017629	thoc1	92	63.773	Oryzias_latipes
ENSEBUG00000005998	thoc1	97	64.608	ENSORLG00020007567	thoc1	92	63.940	Oryzias_latipes_hni
ENSEBUG00000005998	thoc1	98	64.179	ENSORLG00015007356	thoc1	95	63.123	Oryzias_latipes_hsok
ENSEBUG00000005998	thoc1	98	64.013	ENSOMEG00000008200	thoc1	92	63.245	Oryzias_melastigma
ENSEBUG00000005998	thoc1	98	63.289	ENSOGAG00000000470	THOC1	91	61.960	Otolemur_garnettii
ENSEBUG00000005998	thoc1	98	65.615	ENSOARG00000009238	THOC1	91	64.286	Ovis_aries
ENSEBUG00000005998	thoc1	98	65.449	ENSPPAG00000031812	THOC1	91	64.120	Pan_paniscus
ENSEBUG00000005998	thoc1	98	65.781	ENSPPRG00000023794	THOC1	87	75.080	Panthera_pardus
ENSEBUG00000005998	thoc1	98	65.781	ENSPTIG00000007469	THOC1	87	75.080	Panthera_tigris_altaica
ENSEBUG00000005998	thoc1	98	64.696	ENSPTRG00000009816	THOC1	92	63.383	Pan_troglodytes
ENSEBUG00000005998	thoc1	98	64.851	ENSPANG00000008665	THOC1	92	63.531	Papio_anubis
ENSEBUG00000005998	thoc1	98	62.748	ENSPKIG00000005906	thoc1	92	62.417	Paramormyrops_kingsleyae
ENSEBUG00000005998	thoc1	87	67.355	ENSPSIG00000007691	THOC1	98	65.478	Pelodiscus_sinensis
ENSEBUG00000005998	thoc1	98	61.157	ENSPMGG00000008279	thoc1	93	60.496	Periophthalmus_magnuspinnatus
ENSEBUG00000005998	thoc1	98	65.672	ENSPEMG00000021789	Thoc1	92	64.345	Peromyscus_maniculatus_bairdii
ENSEBUG00000005998	thoc1	78	63.136	ENSPCIG00000026942	THOC1	98	61.507	Phascolarctos_cinereus
ENSEBUG00000005998	thoc1	97	63.894	ENSPFOG00000011673	thoc1	92	63.123	Poecilia_formosa
ENSEBUG00000005998	thoc1	97	63.727	ENSPLAG00000019648	thoc1	92	62.957	Poecilia_latipinna
ENSEBUG00000005998	thoc1	97	64.060	ENSPMEG00000007083	thoc1	92	63.289	Poecilia_mexicana
ENSEBUG00000005998	thoc1	97	63.894	ENSPREG00000006719	thoc1	92	63.123	Poecilia_reticulata
ENSEBUG00000005998	thoc1	72	72.769	ENSPPYG00000009049	-	88	72.769	Pongo_abelii
ENSEBUG00000005998	thoc1	98	59.068	ENSPCAG00000005320	THOC1	66	72.120	Procavia_capensis
ENSEBUG00000005998	thoc1	98	65.781	ENSPCOG00000009234	THOC1	92	64.452	Propithecus_coquereli
ENSEBUG00000005998	thoc1	98	64.452	ENSPVAG00000004007	THOC1	91	63.123	Pteropus_vampyrus
ENSEBUG00000005998	thoc1	97	65.109	ENSPNYG00000019152	thoc1	92	64.333	Pundamilia_nyererei
ENSEBUG00000005998	thoc1	97	65.385	ENSPNAG00000023390	thoc1	92	64.214	Pygocentrus_nattereri
ENSEBUG00000005998	thoc1	86	53.571	ENSRNOG00000015332	Thoc1	96	53.957	Rattus_norvegicus
ENSEBUG00000005998	thoc1	98	64.860	ENSRBIG00000033738	THOC1	88	71.176	Rhinopithecus_bieti
ENSEBUG00000005998	thoc1	98	65.615	ENSRROG00000044988	THOC1	88	74.760	Rhinopithecus_roxellana
ENSEBUG00000005998	thoc1	98	65.615	ENSSBOG00000016556	THOC1	91	64.286	Saimiri_boliviensis_boliviensis
ENSEBUG00000005998	thoc1	98	66.446	ENSSHAG00000014829	THOC1	92	65.124	Sarcophilus_harrisii
ENSEBUG00000005998	thoc1	98	65.563	ENSSFOG00015021527	thoc1	92	64.345	Scleropages_formosus
ENSEBUG00000005998	thoc1	98	63.350	ENSSMAG00000018465	thoc1	93	62.583	Scophthalmus_maximus
ENSEBUG00000005998	thoc1	97	64.775	ENSSDUG00000016810	thoc1	92	64.000	Seriola_dumerili
ENSEBUG00000005998	thoc1	97	64.775	ENSSLDG00000015555	thoc1	92	64.000	Seriola_lalandi_dorsalis
ENSEBUG00000005998	thoc1	85	75.362	ENSSARG00000006910	THOC1	79	75.362	Sorex_araneus
ENSEBUG00000005998	thoc1	99	64.909	ENSSPUG00000007238	THOC1	92	63.471	Sphenodon_punctatus
ENSEBUG00000005998	thoc1	97	62.104	ENSSPAG00000018847	thoc1	91	61.333	Stegastes_partitus
ENSEBUG00000005998	thoc1	98	66.113	ENSSSCG00000025653	THOC1	86	64.784	Sus_scrofa
ENSEBUG00000005998	thoc1	99	66.393	ENSTGUG00000010204	THOC1	92	65.082	Taeniopygia_guttata
ENSEBUG00000005998	thoc1	98	63.350	ENSTRUG00000013518	thoc1	92	62.748	Takifugu_rubripes
ENSEBUG00000005998	thoc1	98	63.184	ENSTNIG00000008473	thoc1	92	62.417	Tetraodon_nigroviridis
ENSEBUG00000005998	thoc1	98	58.472	ENSTBEG00000016920	THOC1	92	57.143	Tupaia_belangeri
ENSEBUG00000005998	thoc1	98	60.299	ENSTTRG00000016664	THOC1	92	58.970	Tursiops_truncatus
ENSEBUG00000005998	thoc1	98	66.279	ENSUAMG00000002527	THOC1	93	64.784	Ursus_americanus
ENSEBUG00000005998	thoc1	98	66.279	ENSUMAG00000019693	THOC1	92	64.950	Ursus_maritimus
ENSEBUG00000005998	thoc1	71	62.551	ENSVPAG00000003726	-	67	62.551	Vicugna_pacos
ENSEBUG00000005998	thoc1	98	66.279	ENSVVUG00000004384	THOC1	92	64.950	Vulpes_vulpes
ENSEBUG00000005998	thoc1	98	64.532	ENSXETG00000003155	thoc1	90	63.218	Xenopus_tropicalis
ENSEBUG00000005998	thoc1	97	61.730	ENSXCOG00000016085	thoc1	87	60.566	Xiphophorus_couchianus
ENSEBUG00000005998	thoc1	97	64.060	ENSXMAG00000002353	thoc1	92	63.289	Xiphophorus_maculatus