EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000006116 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1 (1 of many)
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 38443 bases
Position: chrFYBX02010590.1:324865-363307
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009543	RNase_H	PF00075.24	3.5e-36	1	1
ENSEBUP00000009501	RNase_H	PF00075.24	3.7e-36	1	1
ENSEBUP00000009518	RNase_H	PF00075.24	5.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010026	-	2117	-	ENSEBUP00000009501	332 (aa)	-	-
ENSEBUT00000010043	-	2013	-	ENSEBUP00000009518	408 (aa)	-	-
ENSEBUT00000010067	-	2756	-	ENSEBUP00000009543	325 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000006116	rnaseh1	77	40.138	ENSEBUG00000008898	rnaseh1	97	40.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006116	rnaseh1	77	45.211	ENSG00000171865	RNASEH1	89	45.211	Homo_sapiens
ENSEBUG00000006116	rnaseh1	78	44.569	ENSAPOG00000000412	rnaseh1	88	44.569	Acanthochromis_polyacanthus
ENSEBUG00000006116	rnaseh1	79	44.737	ENSAMEG00000018433	RNASEH1	91	44.737	Ailuropoda_melanoleuca
ENSEBUG00000006116	rnaseh1	78	46.768	ENSACIG00000014666	rnaseh1	87	46.768	Amphilophus_citrinellus
ENSEBUG00000006116	rnaseh1	79	44.815	ENSAOCG00000015210	rnaseh1	89	44.815	Amphiprion_ocellaris
ENSEBUG00000006116	rnaseh1	79	45.185	ENSAPEG00000014104	rnaseh1	89	45.185	Amphiprion_percula
ENSEBUG00000006116	rnaseh1	79	45.556	ENSATEG00000000598	rnaseh1	95	45.556	Anabas_testudineus
ENSEBUG00000006116	rnaseh1	74	45.669	ENSAPLG00000001961	RNASEH1	99	45.669	Anas_platyrhynchos
ENSEBUG00000006116	rnaseh1	78	41.017	ENSACAG00000016857	rnaseh1	91	41.017	Anolis_carolinensis
ENSEBUG00000006116	rnaseh1	77	43.678	ENSANAG00000024055	RNASEH1	89	43.678	Aotus_nancymaae
ENSEBUG00000006116	rnaseh1	78	44.485	ENSACLG00000006741	rnaseh1	87	45.556	Astatotilapia_calliptera
ENSEBUG00000006116	rnaseh1	78	42.045	ENSAMXG00000042940	rnaseh1	96	42.045	Astyanax_mexicanus
ENSEBUG00000006116	rnaseh1	80	45.725	ENSBTAG00000016235	RNASEH1	93	45.725	Bos_taurus
ENSEBUG00000006116	rnaseh1	77	35.458	WBGene00004382	rnh-1.0	95	35.458	Caenorhabditis_elegans
ENSEBUG00000006116	rnaseh1	77	43.774	ENSCJAG00000035450	RNASEH1	89	43.774	Callithrix_jacchus
ENSEBUG00000006116	rnaseh1	79	46.565	ENSCAFG00000003259	RNASEH1	91	46.565	Canis_familiaris
ENSEBUG00000006116	rnaseh1	80	45.318	ENSCHIG00000022264	-	92	45.693	Capra_hircus
ENSEBUG00000006116	rnaseh1	72	35.537	ENSCHIG00000022230	-	99	35.537	Capra_hircus
ENSEBUG00000006116	rnaseh1	82	45.126	ENSTSYG00000012926	RNASEH1	93	45.126	Carlito_syrichta
ENSEBUG00000006116	rnaseh1	73	46.444	ENSCAPG00000004813	RNASEH1	98	46.444	Cavia_aperea
ENSEBUG00000006116	rnaseh1	79	47.148	ENSCPOG00000022278	Rnaseh1	89	47.148	Cavia_porcellus
ENSEBUG00000006116	rnaseh1	77	43.396	ENSCCAG00000038017	RNASEH1	89	43.396	Cebus_capucinus
ENSEBUG00000006116	rnaseh1	77	44.231	ENSCATG00000016515	-	89	44.231	Cercocebus_atys
ENSEBUG00000006116	rnaseh1	77	41.176	ENSCATG00000016818	-	88	41.176	Cercocebus_atys
ENSEBUG00000006116	rnaseh1	77	47.490	ENSCLAG00000002440	RNASEH1	89	48.047	Chinchilla_lanigera
ENSEBUG00000006116	rnaseh1	77	44.061	ENSCSAG00000006943	RNASEH1	89	44.061	Chlorocebus_sabaeus
ENSEBUG00000006116	rnaseh1	78	48.134	ENSCPBG00000021620	RNASEH1	98	48.881	Chrysemys_picta_bellii
ENSEBUG00000006116	rnaseh1	79	36.996	ENSCING00000014054	-	93	36.996	Ciona_intestinalis
ENSEBUG00000006116	rnaseh1	65	35.160	ENSCSAVG00000000009	-	96	34.842	Ciona_savignyi
ENSEBUG00000006116	rnaseh1	77	44.828	ENSCANG00000037763	RNASEH1	89	44.828	Colobus_angolensis_palliatus
ENSEBUG00000006116	rnaseh1	78	46.768	ENSCGRG00001008950	Rnaseh1	91	46.360	Cricetulus_griseus_chok1gshd
ENSEBUG00000006116	rnaseh1	78	46.768	ENSCGRG00000006029	Rnaseh1	91	46.360	Cricetulus_griseus_crigri
ENSEBUG00000006116	rnaseh1	77	44.223	ENSCSEG00000005741	rnaseh1	92	41.264	Cynoglossus_semilaevis
ENSEBUG00000006116	rnaseh1	79	43.841	ENSCVAG00000018717	rnaseh1	91	43.841	Cyprinodon_variegatus
ENSEBUG00000006116	rnaseh1	78	45.149	ENSDARG00000042571	rnaseh1	97	45.149	Danio_rerio
ENSEBUG00000006116	rnaseh1	77	45.736	ENSDNOG00000016056	RNASEH1	89	45.736	Dasypus_novemcinctus
ENSEBUG00000006116	rnaseh1	79	45.185	ENSDORG00000000704	Rnaseh1	92	45.185	Dipodomys_ordii
ENSEBUG00000006116	rnaseh1	78	33.904	FBgn0023171	rnh1	93	33.904	Drosophila_melanogaster
ENSEBUG00000006116	rnaseh1	79	43.561	ENSETEG00000012674	RNASEH1	90	43.561	Echinops_telfairi
ENSEBUG00000006116	rnaseh1	79	45.113	ENSEASG00005022200	RNASEH1	89	45.489	Equus_asinus_asinus
ENSEBUG00000006116	rnaseh1	79	45.113	ENSECAG00000020695	RNASEH1	89	45.489	Equus_caballus
ENSEBUG00000006116	rnaseh1	78	43.494	ENSELUG00000010112	rnaseh1	90	43.494	Esox_lucius
ENSEBUG00000006116	rnaseh1	77	45.736	ENSFCAG00000025832	RNASEH1	91	45.076	Felis_catus
ENSEBUG00000006116	rnaseh1	78	44.364	ENSFALG00000002069	RNASEH1	92	44.364	Ficedula_albicollis
ENSEBUG00000006116	rnaseh1	78	47.909	ENSFDAG00000002035	RNASEH1	80	47.909	Fukomys_damarensis
ENSEBUG00000006116	rnaseh1	78	47.674	ENSGMOG00000013818	rnaseh1	90	47.674	Gadus_morhua
ENSEBUG00000006116	rnaseh1	77	44.444	ENSGALG00000016389	RNASEH1	91	44.569	Gallus_gallus
ENSEBUG00000006116	rnaseh1	78	46.241	ENSGAFG00000001776	rnaseh1	89	46.241	Gambusia_affinis
ENSEBUG00000006116	rnaseh1	78	42.481	ENSGACG00000011935	rnaseh1	88	42.481	Gasterosteus_aculeatus
ENSEBUG00000006116	rnaseh1	78	46.442	ENSGAGG00000009150	RNASEH1	61	46.816	Gopherus_agassizii
ENSEBUG00000006116	rnaseh1	77	44.828	ENSGGOG00000034822	RNASEH1	89	44.828	Gorilla_gorilla
ENSEBUG00000006116	rnaseh1	78	44.485	ENSHBUG00000004666	rnaseh1	87	45.556	Haplochromis_burtoni
ENSEBUG00000006116	rnaseh1	78	46.970	ENSHGLG00000002585	Rnaseh1	83	46.970	Heterocephalus_glaber_female
ENSEBUG00000006116	rnaseh1	78	46.970	ENSHGLG00100005105	Rnaseh1	83	46.970	Heterocephalus_glaber_male
ENSEBUG00000006116	rnaseh1	78	44.649	ENSHCOG00000012329	rnaseh1	88	44.485	Hippocampus_comes
ENSEBUG00000006116	rnaseh1	79	46.875	ENSIPUG00000023060	rnaseh1	97	46.875	Ictalurus_punctatus
ENSEBUG00000006116	rnaseh1	77	44.615	ENSSTOG00000012774	RNASEH1	92	44.906	Ictidomys_tridecemlineatus
ENSEBUG00000006116	rnaseh1	71	44.726	ENSJJAG00000020238	Rnaseh1	91	44.726	Jaculus_jaculus
ENSEBUG00000006116	rnaseh1	75	38.956	ENSJJAG00000008994	-	88	38.956	Jaculus_jaculus
ENSEBUG00000006116	rnaseh1	78	41.923	ENSJJAG00000021481	-	90	41.923	Jaculus_jaculus
ENSEBUG00000006116	rnaseh1	92	44.262	ENSKMAG00000001373	rnaseh1	98	44.262	Kryptolebias_marmoratus
ENSEBUG00000006116	rnaseh1	78	41.603	ENSLBEG00000004480	rnaseh1	94	41.699	Labrus_bergylta
ENSEBUG00000006116	rnaseh1	78	45.221	ENSLACG00000007100	RNASEH1	88	44.727	Latimeria_chalumnae
ENSEBUG00000006116	rnaseh1	78	44.604	ENSLOCG00000017212	rnaseh1	97	44.765	Lepisosteus_oculatus
ENSEBUG00000006116	rnaseh1	79	46.241	ENSLAFG00000015091	RNASEH1	91	46.442	Loxodonta_africana
ENSEBUG00000006116	rnaseh1	77	43.254	ENSMFAG00000002323	-	88	43.254	Macaca_fascicularis
ENSEBUG00000006116	rnaseh1	77	44.444	ENSMFAG00000000063	-	89	44.444	Macaca_fascicularis
ENSEBUG00000006116	rnaseh1	77	43.651	ENSMMUG00000019280	-	88	43.651	Macaca_mulatta
ENSEBUG00000006116	rnaseh1	77	43.651	ENSMNEG00000029676	-	88	43.651	Macaca_nemestrina
ENSEBUG00000006116	rnaseh1	77	44.828	ENSMNEG00000040183	-	89	44.828	Macaca_nemestrina
ENSEBUG00000006116	rnaseh1	77	44.444	ENSMLEG00000028662	-	88	44.444	Mandrillus_leucophaeus
ENSEBUG00000006116	rnaseh1	72	44.262	ENSMLEG00000039352	-	98	44.262	Mandrillus_leucophaeus
ENSEBUG00000006116	rnaseh1	79	43.956	ENSMAMG00000019725	rnaseh1	95	43.956	Mastacembelus_armatus
ENSEBUG00000006116	rnaseh1	78	44.485	ENSMZEG00005013006	rnaseh1	87	45.556	Maylandia_zebra
ENSEBUG00000006116	rnaseh1	67	42.500	ENSMGAG00000013979	RNASEH1	98	42.500	Meleagris_gallopavo
ENSEBUG00000006116	rnaseh1	78	48.092	ENSMAUG00000014957	Rnaseh1	91	48.092	Mesocricetus_auratus
ENSEBUG00000006116	rnaseh1	78	45.000	ENSMICG00000033156	RNASEH1	90	45.000	Microcebus_murinus
ENSEBUG00000006116	rnaseh1	78	47.529	ENSMOCG00000015522	Rnaseh1	91	47.529	Microtus_ochrogaster
ENSEBUG00000006116	rnaseh1	79	42.537	ENSMMOG00000015902	rnaseh1	89	42.537	Mola_mola
ENSEBUG00000006116	rnaseh1	68	42.358	ENSMODG00000028814	-	91	43.750	Monodelphis_domestica
ENSEBUG00000006116	rnaseh1	77	47.012	ENSMODG00000014491	-	88	47.012	Monodelphis_domestica
ENSEBUG00000006116	rnaseh1	78	44.961	ENSMALG00000010565	rnaseh1	87	44.961	Monopterus_albus
ENSEBUG00000006116	rnaseh1	78	45.865	MGP_CAROLIEiJ_G0017660	Rnaseh1	91	45.865	Mus_caroli
ENSEBUG00000006116	rnaseh1	78	46.617	ENSMUSG00000020630	Rnaseh1	91	46.617	Mus_musculus
ENSEBUG00000006116	rnaseh1	78	45.736	MGP_PahariEiJ_G0029418	Rnaseh1	91	46.241	Mus_pahari
ENSEBUG00000006116	rnaseh1	78	45.865	MGP_SPRETEiJ_G0018502	Rnaseh1	91	45.865	Mus_spretus
ENSEBUG00000006116	rnaseh1	78	44.776	ENSNGAG00000015966	Rnaseh1	85	44.776	Nannospalax_galili
ENSEBUG00000006116	rnaseh1	78	44.118	ENSNBRG00000008739	rnaseh1	87	45.185	Neolamprologus_brichardi
ENSEBUG00000006116	rnaseh1	77	37.405	ENSNLEG00000015400	RNASEH1	87	37.405	Nomascus_leucogenys
ENSEBUG00000006116	rnaseh1	73	38.800	ENSNLEG00000000059	-	90	38.800	Nomascus_leucogenys
ENSEBUG00000006116	rnaseh1	56	40.426	ENSMEUG00000003610	-	64	40.426	Notamacropus_eugenii
ENSEBUG00000006116	rnaseh1	79	47.940	ENSOPRG00000005072	RNASEH1	91	47.940	Ochotona_princeps
ENSEBUG00000006116	rnaseh1	77	47.410	ENSODEG00000000235	Rnaseh1	85	47.410	Octodon_degus
ENSEBUG00000006116	rnaseh1	78	44.485	ENSONIG00000018697	rnaseh1	97	44.485	Oreochromis_niloticus
ENSEBUG00000006116	rnaseh1	77	47.244	ENSOCUG00000006117	RNASEH1	91	47.490	Oryctolagus_cuniculus
ENSEBUG00000006116	rnaseh1	79	46.667	ENSORLG00000018127	rnaseh1	97	46.350	Oryzias_latipes
ENSEBUG00000006116	rnaseh1	79	46.667	ENSORLG00020013660	rnaseh1	90	46.350	Oryzias_latipes_hni
ENSEBUG00000006116	rnaseh1	79	46.296	ENSORLG00015011338	rnaseh1	90	45.985	Oryzias_latipes_hsok
ENSEBUG00000006116	rnaseh1	70	45.238	ENSOMEG00000004710	rnaseh1	89	45.238	Oryzias_melastigma
ENSEBUG00000006116	rnaseh1	82	43.173	ENSOGAG00000017176	RNASEH1	94	43.173	Otolemur_garnettii
ENSEBUG00000006116	rnaseh1	78	40.824	ENSOARG00000005386	RNASEH1	90	41.199	Ovis_aries
ENSEBUG00000006116	rnaseh1	77	45.211	ENSPPAG00000034221	RNASEH1	89	45.211	Pan_paniscus
ENSEBUG00000006116	rnaseh1	77	45.736	ENSPPRG00000015513	RNASEH1	91	45.076	Panthera_pardus
ENSEBUG00000006116	rnaseh1	72	46.058	ENSPTIG00000019034	RNASEH1	83	46.058	Panthera_tigris_altaica
ENSEBUG00000006116	rnaseh1	73	37.751	ENSPTRG00000043403	-	92	37.751	Pan_troglodytes
ENSEBUG00000006116	rnaseh1	77	45.211	ENSPTRG00000011614	RNASEH1	89	45.211	Pan_troglodytes
ENSEBUG00000006116	rnaseh1	77	43.678	ENSPANG00000000443	RNASEH1	97	43.496	Papio_anubis
ENSEBUG00000006116	rnaseh1	77	40.873	ENSPANG00000018246	-	88	40.873	Papio_anubis
ENSEBUG00000006116	rnaseh1	77	45.185	ENSPKIG00000003146	rnaseh1	96	46.512	Paramormyrops_kingsleyae
ENSEBUG00000006116	rnaseh1	78	48.529	ENSPSIG00000002937	RNASEH1	98	48.339	Pelodiscus_sinensis
ENSEBUG00000006116	rnaseh1	77	46.429	ENSPMGG00000017463	rnaseh1	89	46.429	Periophthalmus_magnuspinnatus
ENSEBUG00000006116	rnaseh1	78	46.154	ENSPEMG00000022465	-	91	48.315	Peromyscus_maniculatus_bairdii
ENSEBUG00000006116	rnaseh1	77	45.490	ENSPCIG00000023334	-	88	45.490	Phascolarctos_cinereus
ENSEBUG00000006116	rnaseh1	78	45.627	ENSPFOG00000002841	rnaseh1	89	45.627	Poecilia_formosa
ENSEBUG00000006116	rnaseh1	61	39.320	ENSPLAG00000021349	-	80	39.320	Poecilia_latipinna
ENSEBUG00000006116	rnaseh1	78	45.627	ENSPMEG00000016826	rnaseh1	89	45.627	Poecilia_mexicana
ENSEBUG00000006116	rnaseh1	77	44.776	ENSPREG00000012197	rnaseh1	89	44.776	Poecilia_reticulata
ENSEBUG00000006116	rnaseh1	77	39.442	ENSPPYG00000025873	RNASEH1	87	39.442	Pongo_abelii
ENSEBUG00000006116	rnaseh1	71	39.149	ENSPPYG00000008067	-	90	39.149	Pongo_abelii
ENSEBUG00000006116	rnaseh1	80	44.403	ENSPCAG00000002500	RNASEH1	92	44.403	Procavia_capensis
ENSEBUG00000006116	rnaseh1	78	40.310	ENSPCOG00000019444	RNASEH1	89	40.310	Propithecus_coquereli
ENSEBUG00000006116	rnaseh1	83	44.086	ENSPVAG00000002070	RNASEH1	95	44.086	Pteropus_vampyrus
ENSEBUG00000006116	rnaseh1	78	44.485	ENSPNYG00000001292	rnaseh1	87	45.556	Pundamilia_nyererei
ENSEBUG00000006116	rnaseh1	78	47.471	ENSPNAG00000022344	rnaseh1	89	47.471	Pygocentrus_nattereri
ENSEBUG00000006116	rnaseh1	78	46.512	ENSRNOG00000008584	Rnaseh1	91	46.241	Rattus_norvegicus
ENSEBUG00000006116	rnaseh1	77	44.444	ENSRBIG00000034222	RNASEH1	88	44.444	Rhinopithecus_bieti
ENSEBUG00000006116	rnaseh1	77	44.444	ENSRROG00000041761	RNASEH1	88	44.444	Rhinopithecus_roxellana
ENSEBUG00000006116	rnaseh1	78	48.889	YMR234W	-	77	48.889	Saccharomyces_cerevisiae
ENSEBUG00000006116	rnaseh1	77	43.019	ENSSBOG00000025411	RNASEH1	89	43.019	Saimiri_boliviensis_boliviensis
ENSEBUG00000006116	rnaseh1	82	46.545	ENSSHAG00000013051	RNASEH1	94	46.545	Sarcophilus_harrisii
ENSEBUG00000006116	rnaseh1	78	45.276	ENSSFOG00015002709	rnaseh1	89	44.094	Scleropages_formosus
ENSEBUG00000006116	rnaseh1	79	45.055	ENSSMAG00000007586	rnaseh1	88	46.269	Scophthalmus_maximus
ENSEBUG00000006116	rnaseh1	79	43.590	ENSSDUG00000008217	rnaseh1	95	44.280	Seriola_dumerili
ENSEBUG00000006116	rnaseh1	95	37.963	ENSSLDG00000000442	rnaseh1	95	43.359	Seriola_lalandi_dorsalis
ENSEBUG00000006116	rnaseh1	78	47.407	ENSSPUG00000006644	RNASEH1	92	47.407	Sphenodon_punctatus
ENSEBUG00000006116	rnaseh1	79	45.556	ENSSPAG00000009353	rnaseh1	89	45.556	Stegastes_partitus
ENSEBUG00000006116	rnaseh1	80	44.403	ENSSSCG00000025305	RNASEH1	92	44.403	Sus_scrofa
ENSEBUG00000006116	rnaseh1	77	42.294	ENSTGUG00000012980	RNASEH1	91	42.652	Taeniopygia_guttata
ENSEBUG00000006116	rnaseh1	79	44.444	ENSTRUG00000015774	rnaseh1	96	44.444	Takifugu_rubripes
ENSEBUG00000006116	rnaseh1	80	44.815	ENSTNIG00000010715	rnaseh1	98	44.815	Tetraodon_nigroviridis
ENSEBUG00000006116	rnaseh1	80	43.866	ENSTTRG00000001615	RNASEH1	92	43.866	Tursiops_truncatus
ENSEBUG00000006116	rnaseh1	60	40.394	ENSUMAG00000003941	RNASEH1	65	40.394	Ursus_maritimus
ENSEBUG00000006116	rnaseh1	80	37.594	ENSVPAG00000011589	RNASEH1	92	37.594	Vicugna_pacos
ENSEBUG00000006116	rnaseh1	79	44.776	ENSVVUG00000008633	RNASEH1	81	44.776	Vulpes_vulpes
ENSEBUG00000006116	rnaseh1	77	43.233	ENSXETG00000001212	rnaseh1	98	40.000	Xenopus_tropicalis
ENSEBUG00000006116	rnaseh1	77	40.000	ENSXETG00000030371	-	98	40.000	Xenopus_tropicalis
ENSEBUG00000006116	rnaseh1	78	45.693	ENSXMAG00000002357	rnaseh1	89	45.693	Xiphophorus_maculatus