EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000006117 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 100777 bases
Position: chrFYBX02009965.1:299204-399980
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000009556	CPSF_A	PF03178.15	2.4e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000010082	-	3621	-	ENSEBUP00000009556	1206 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000006117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000006117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000006117	sf3b3	100	87.757	ENSG00000189091	SF3B3	100	90.323	Homo_sapiens
ENSEBUG00000006117	sf3b3	96	86.251	ENSAPOG00000006172	sf3b3	98	86.251	Acanthochromis_polyacanthus
ENSEBUG00000006117	sf3b3	100	87.623	ENSAMEG00000002187	SF3B3	100	87.623	Ailuropoda_melanoleuca
ENSEBUG00000006117	sf3b3	92	83.914	ENSACIG00000016487	sf3b3	99	83.914	Amphilophus_citrinellus
ENSEBUG00000006117	sf3b3	100	86.442	ENSAOCG00000007158	sf3b3	100	86.442	Amphiprion_ocellaris
ENSEBUG00000006117	sf3b3	100	86.442	ENSAPEG00000022786	sf3b3	100	86.442	Amphiprion_percula
ENSEBUG00000006117	sf3b3	100	86.771	ENSATEG00000013708	sf3b3	100	86.771	Anabas_testudineus
ENSEBUG00000006117	sf3b3	81	87.195	ENSAPLG00000004996	SF3B3	99	87.195	Anas_platyrhynchos
ENSEBUG00000006117	sf3b3	100	87.839	ENSACAG00000001817	SF3B3	100	87.839	Anolis_carolinensis
ENSEBUG00000006117	sf3b3	100	87.757	ENSANAG00000028001	SF3B3	100	87.757	Aotus_nancymaae
ENSEBUG00000006117	sf3b3	96	86.336	ENSACLG00000022555	sf3b3	98	86.336	Astatotilapia_calliptera
ENSEBUG00000006117	sf3b3	100	86.360	ENSAMXG00000003410	sf3b3	100	86.360	Astyanax_mexicanus
ENSEBUG00000006117	sf3b3	100	87.757	ENSBTAG00000010627	SF3B3	100	87.757	Bos_taurus
ENSEBUG00000006117	sf3b3	100	57.166	WBGene00019323	teg-4	100	57.166	Caenorhabditis_elegans
ENSEBUG00000006117	sf3b3	100	87.757	ENSCJAG00000014773	SF3B3	99	87.757	Callithrix_jacchus
ENSEBUG00000006117	sf3b3	100	87.839	ENSCAFG00000020151	SF3B3	100	87.839	Canis_familiaris
ENSEBUG00000006117	sf3b3	100	87.839	ENSCAFG00020020912	SF3B3	100	87.839	Canis_lupus_dingo
ENSEBUG00000006117	sf3b3	100	87.839	ENSCHIG00000019822	SF3B3	100	87.839	Capra_hircus
ENSEBUG00000006117	sf3b3	100	87.757	ENSTSYG00000007910	SF3B3	100	87.757	Carlito_syrichta
ENSEBUG00000006117	sf3b3	84	78.032	ENSCAPG00000001484	SF3B3	92	78.032	Cavia_aperea
ENSEBUG00000006117	sf3b3	100	86.689	ENSCPOG00000000586	SF3B3	100	86.689	Cavia_porcellus
ENSEBUG00000006117	sf3b3	100	87.757	ENSCCAG00000017736	SF3B3	100	87.757	Cebus_capucinus
ENSEBUG00000006117	sf3b3	100	87.757	ENSCATG00000036562	SF3B3	100	87.757	Cercocebus_atys
ENSEBUG00000006117	sf3b3	100	87.757	ENSCLAG00000003921	SF3B3	100	87.757	Chinchilla_lanigera
ENSEBUG00000006117	sf3b3	100	87.757	ENSCSAG00000004371	SF3B3	100	87.757	Chlorocebus_sabaeus
ENSEBUG00000006117	sf3b3	91	86.293	ENSCHOG00000001878	SF3B3	90	86.293	Choloepus_hoffmanni
ENSEBUG00000006117	sf3b3	100	87.428	ENSCPBG00000015853	SF3B3	100	87.428	Chrysemys_picta_bellii
ENSEBUG00000006117	sf3b3	100	77.586	ENSCING00000001342	-	100	77.586	Ciona_intestinalis
ENSEBUG00000006117	sf3b3	99	76.273	ENSCSAVG00000011454	-	100	76.273	Ciona_savignyi
ENSEBUG00000006117	sf3b3	100	84.717	ENSCANG00000042920	SF3B3	100	85.127	Colobus_angolensis_palliatus
ENSEBUG00000006117	sf3b3	100	87.757	ENSCGRG00001015908	Sf3b3	100	87.757	Cricetulus_griseus_chok1gshd
ENSEBUG00000006117	sf3b3	100	87.757	ENSCGRG00000010180	Sf3b3	100	87.757	Cricetulus_griseus_crigri
ENSEBUG00000006117	sf3b3	82	85.429	ENSCSEG00000014192	sf3b3	99	85.429	Cynoglossus_semilaevis
ENSEBUG00000006117	sf3b3	100	86.196	ENSCVAG00000010459	sf3b3	100	86.196	Cyprinodon_variegatus
ENSEBUG00000006117	sf3b3	100	86.689	ENSDARG00000103553	sf3b3	100	86.689	Danio_rerio
ENSEBUG00000006117	sf3b3	85	87.367	ENSDNOG00000043626	SF3B3	100	87.367	Dasypus_novemcinctus
ENSEBUG00000006117	sf3b3	100	87.757	ENSDORG00000014176	Sf3b3	100	87.757	Dipodomys_ordii
ENSEBUG00000006117	sf3b3	100	71.720	FBgn0035162	Sf3b3	100	71.720	Drosophila_melanogaster
ENSEBUG00000006117	sf3b3	84	94.086	ENSETEG00000002729	SF3B3	84	94.086	Echinops_telfairi
ENSEBUG00000006117	sf3b3	100	87.839	ENSEASG00005013376	SF3B3	100	87.839	Equus_asinus_asinus
ENSEBUG00000006117	sf3b3	100	87.839	ENSECAG00000014053	SF3B3	100	87.839	Equus_caballus
ENSEBUG00000006117	sf3b3	93	86.786	ENSEEUG00000015611	SF3B3	93	86.786	Erinaceus_europaeus
ENSEBUG00000006117	sf3b3	100	84.590	ENSELUG00000015417	sf3b3	100	84.590	Esox_lucius
ENSEBUG00000006117	sf3b3	100	87.839	ENSFCAG00000009487	SF3B3	100	87.839	Felis_catus
ENSEBUG00000006117	sf3b3	100	87.921	ENSFALG00000007372	SF3B3	100	87.921	Ficedula_albicollis
ENSEBUG00000006117	sf3b3	100	87.757	ENSFDAG00000002608	SF3B3	100	87.757	Fukomys_damarensis
ENSEBUG00000006117	sf3b3	100	86.442	ENSFHEG00000017824	sf3b3	100	86.442	Fundulus_heteroclitus
ENSEBUG00000006117	sf3b3	100	83.169	ENSGMOG00000008139	sf3b3	100	83.169	Gadus_morhua
ENSEBUG00000006117	sf3b3	100	87.839	ENSGALG00000002531	SF3B3	100	87.839	Gallus_gallus
ENSEBUG00000006117	sf3b3	100	85.867	ENSGAFG00000015206	sf3b3	100	85.867	Gambusia_affinis
ENSEBUG00000006117	sf3b3	100	86.453	ENSGACG00000002646	sf3b3	100	86.453	Gasterosteus_aculeatus
ENSEBUG00000006117	sf3b3	96	87.447	ENSGAGG00000006746	SF3B3	97	87.447	Gopherus_agassizii
ENSEBUG00000006117	sf3b3	100	87.757	ENSGGOG00000003246	SF3B3	100	87.757	Gorilla_gorilla
ENSEBUG00000006117	sf3b3	92	79.928	ENSHBUG00000005960	sf3b3	99	80.556	Haplochromis_burtoni
ENSEBUG00000006117	sf3b3	100	87.757	ENSHGLG00000010135	SF3B3	100	87.757	Heterocephalus_glaber_female
ENSEBUG00000006117	sf3b3	100	86.699	ENSHGLG00100011148	SF3B3	100	86.699	Heterocephalus_glaber_male
ENSEBUG00000006117	sf3b3	100	86.113	ENSHCOG00000011981	sf3b3	100	86.113	Hippocampus_comes
ENSEBUG00000006117	sf3b3	100	86.442	ENSIPUG00000020435	sf3b3	100	86.442	Ictalurus_punctatus
ENSEBUG00000006117	sf3b3	100	87.757	ENSSTOG00000007065	SF3B3	100	87.757	Ictidomys_tridecemlineatus
ENSEBUG00000006117	sf3b3	100	87.757	ENSJJAG00000003948	Sf3b3	100	87.757	Jaculus_jaculus
ENSEBUG00000006117	sf3b3	100	86.386	ENSKMAG00000004066	sf3b3	100	86.386	Kryptolebias_marmoratus
ENSEBUG00000006117	sf3b3	100	86.196	ENSLBEG00000018302	sf3b3	100	86.196	Labrus_bergylta
ENSEBUG00000006117	sf3b3	98	84.136	ENSLACG00000012501	SF3B3	99	84.136	Latimeria_chalumnae
ENSEBUG00000006117	sf3b3	100	86.207	ENSLOCG00000007566	sf3b3	100	86.207	Lepisosteus_oculatus
ENSEBUG00000006117	sf3b3	100	87.839	ENSLAFG00000012219	SF3B3	100	87.839	Loxodonta_africana
ENSEBUG00000006117	sf3b3	100	87.757	ENSMFAG00000045487	SF3B3	100	87.757	Macaca_fascicularis
ENSEBUG00000006117	sf3b3	100	87.757	ENSMMUG00000017812	SF3B3	100	87.757	Macaca_mulatta
ENSEBUG00000006117	sf3b3	100	87.757	ENSMNEG00000033385	SF3B3	100	87.757	Macaca_nemestrina
ENSEBUG00000006117	sf3b3	100	84.470	ENSMLEG00000043891	SF3B3	100	84.470	Mandrillus_leucophaeus
ENSEBUG00000006117	sf3b3	100	86.771	ENSMAMG00000016837	sf3b3	100	86.771	Mastacembelus_armatus
ENSEBUG00000006117	sf3b3	89	83.719	ENSMZEG00005026015	sf3b3	99	83.719	Maylandia_zebra
ENSEBUG00000006117	sf3b3	100	86.524	ENSMZEG00005010836	sf3b3	100	86.524	Maylandia_zebra
ENSEBUG00000006117	sf3b3	100	87.839	ENSMGAG00000001597	SF3B3	100	87.839	Meleagris_gallopavo
ENSEBUG00000006117	sf3b3	81	72.236	ENSMAUG00000013618	Sf3b3	95	72.236	Mesocricetus_auratus
ENSEBUG00000006117	sf3b3	100	87.203	ENSMICG00000001363	SF3B3	100	87.203	Microcebus_murinus
ENSEBUG00000006117	sf3b3	100	87.757	ENSMOCG00000006108	Sf3b3	100	87.757	Microtus_ochrogaster
ENSEBUG00000006117	sf3b3	89	83.719	ENSMMOG00000002598	sf3b3	97	83.719	Mola_mola
ENSEBUG00000006117	sf3b3	100	83.908	ENSMODG00000014363	SF3B3	100	83.908	Monodelphis_domestica
ENSEBUG00000006117	sf3b3	100	86.360	ENSMALG00000008014	sf3b3	100	86.360	Monopterus_albus
ENSEBUG00000006117	sf3b3	100	87.757	MGP_CAROLIEiJ_G0031563	Sf3b3	100	87.757	Mus_caroli
ENSEBUG00000006117	sf3b3	100	87.757	ENSMUSG00000033732	Sf3b3	100	87.757	Mus_musculus
ENSEBUG00000006117	sf3b3	100	87.757	MGP_SPRETEiJ_G0032681	Sf3b3	100	87.757	Mus_spretus
ENSEBUG00000006117	sf3b3	100	87.839	ENSMPUG00000010277	SF3B3	100	87.839	Mustela_putorius_furo
ENSEBUG00000006117	sf3b3	100	87.757	ENSMLUG00000014607	SF3B3	100	87.757	Myotis_lucifugus
ENSEBUG00000006117	sf3b3	100	87.757	ENSNGAG00000021903	Sf3b3	100	87.757	Nannospalax_galili
ENSEBUG00000006117	sf3b3	83	91.429	ENSNBRG00000007197	sf3b3	99	91.429	Neolamprologus_brichardi
ENSEBUG00000006117	sf3b3	100	86.535	ENSNLEG00000016127	SF3B3	100	86.535	Nomascus_leucogenys
ENSEBUG00000006117	sf3b3	89	93.134	ENSMEUG00000004479	SF3B3	89	93.134	Notamacropus_eugenii
ENSEBUG00000006117	sf3b3	98	84.744	ENSOPRG00000009847	SF3B3	100	84.744	Ochotona_princeps
ENSEBUG00000006117	sf3b3	100	87.757	ENSODEG00000014154	SF3B3	100	87.757	Octodon_degus
ENSEBUG00000006117	sf3b3	100	86.689	ENSONIG00000011198	sf3b3	100	86.689	Oreochromis_niloticus
ENSEBUG00000006117	sf3b3	100	87.921	ENSOANG00000001161	-	100	87.921	Ornithorhynchus_anatinus
ENSEBUG00000006117	sf3b3	100	85.703	ENSOCUG00000004139	SF3B3	100	85.703	Oryctolagus_cuniculus
ENSEBUG00000006117	sf3b3	100	86.442	ENSORLG00000013472	sf3b3	100	86.442	Oryzias_latipes
ENSEBUG00000006117	sf3b3	100	86.442	ENSORLG00020017473	sf3b3	100	86.442	Oryzias_latipes_hni
ENSEBUG00000006117	sf3b3	100	86.442	ENSORLG00015007710	sf3b3	100	86.442	Oryzias_latipes_hsok
ENSEBUG00000006117	sf3b3	100	86.196	ENSOMEG00000014483	sf3b3	100	86.196	Oryzias_melastigma
ENSEBUG00000006117	sf3b3	100	87.459	ENSOGAG00000016051	SF3B3	100	87.459	Otolemur_garnettii
ENSEBUG00000006117	sf3b3	100	87.623	ENSOARG00000004816	SF3B3	100	87.623	Ovis_aries
ENSEBUG00000006117	sf3b3	100	87.757	ENSPPAG00000026807	SF3B3	100	87.757	Pan_paniscus
ENSEBUG00000006117	sf3b3	100	87.839	ENSPPRG00000001686	SF3B3	100	87.839	Panthera_pardus
ENSEBUG00000006117	sf3b3	89	84.821	ENSPTIG00000020382	SF3B3	100	84.821	Panthera_tigris_altaica
ENSEBUG00000006117	sf3b3	100	87.757	ENSPTRG00000008308	SF3B3	100	87.757	Pan_troglodytes
ENSEBUG00000006117	sf3b3	100	87.757	ENSPANG00000024075	SF3B3	100	87.757	Papio_anubis
ENSEBUG00000006117	sf3b3	100	86.196	ENSPKIG00000002712	sf3b3	100	86.196	Paramormyrops_kingsleyae
ENSEBUG00000006117	sf3b3	89	87.489	ENSPSIG00000002232	SF3B3	100	87.489	Pelodiscus_sinensis
ENSEBUG00000006117	sf3b3	100	87.757	ENSPEMG00000008603	Sf3b3	100	87.757	Peromyscus_maniculatus_bairdii
ENSEBUG00000006117	sf3b3	100	89.729	ENSPMAG00000001793	sf3b3	100	89.729	Petromyzon_marinus
ENSEBUG00000006117	sf3b3	100	87.921	ENSPCIG00000014927	SF3B3	100	87.921	Phascolarctos_cinereus
ENSEBUG00000006117	sf3b3	100	86.031	ENSPFOG00000015516	sf3b3	100	86.031	Poecilia_formosa
ENSEBUG00000006117	sf3b3	100	86.031	ENSPLAG00000014330	sf3b3	100	86.031	Poecilia_latipinna
ENSEBUG00000006117	sf3b3	100	86.113	ENSPMEG00000019856	sf3b3	100	86.113	Poecilia_mexicana
ENSEBUG00000006117	sf3b3	81	86.585	ENSPREG00000019669	sf3b3	97	86.585	Poecilia_reticulata
ENSEBUG00000006117	sf3b3	95	88.060	ENSPPYG00000007539	SF3B3	100	88.060	Pongo_abelii
ENSEBUG00000006117	sf3b3	92	79.264	ENSPCAG00000002623	SF3B3	91	79.264	Procavia_capensis
ENSEBUG00000006117	sf3b3	85	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSEBUG00000006117	sf3b3	100	87.757	ENSPVAG00000000684	SF3B3	100	87.757	Pteropus_vampyrus
ENSEBUG00000006117	sf3b3	100	86.606	ENSPNYG00000003528	sf3b3	100	86.606	Pundamilia_nyererei
ENSEBUG00000006117	sf3b3	100	86.278	ENSPNAG00000015419	sf3b3	100	86.278	Pygocentrus_nattereri
ENSEBUG00000006117	sf3b3	100	87.757	ENSRNOG00000017724	Sf3b3	100	87.757	Rattus_norvegicus
ENSEBUG00000006117	sf3b3	100	87.757	ENSRBIG00000021904	SF3B3	100	87.757	Rhinopithecus_bieti
ENSEBUG00000006117	sf3b3	100	87.757	ENSRROG00000045703	SF3B3	100	87.757	Rhinopithecus_roxellana
ENSEBUG00000006117	sf3b3	100	87.757	ENSSBOG00000029156	SF3B3	100	87.757	Saimiri_boliviensis_boliviensis
ENSEBUG00000006117	sf3b3	100	87.921	ENSSHAG00000000372	SF3B3	100	87.921	Sarcophilus_harrisii
ENSEBUG00000006117	sf3b3	100	86.935	ENSSFOG00015012877	sf3b3	100	86.935	Scleropages_formosus
ENSEBUG00000006117	sf3b3	100	85.785	ENSSMAG00000014386	sf3b3	100	85.785	Scophthalmus_maximus
ENSEBUG00000006117	sf3b3	100	86.771	ENSSDUG00000021201	sf3b3	100	86.771	Seriola_dumerili
ENSEBUG00000006117	sf3b3	100	86.689	ENSSLDG00000017532	sf3b3	100	86.689	Seriola_lalandi_dorsalis
ENSEBUG00000006117	sf3b3	93	89.130	ENSSARG00000006917	SF3B3	93	89.130	Sorex_araneus
ENSEBUG00000006117	sf3b3	100	87.757	ENSSPUG00000006253	SF3B3	100	87.757	Sphenodon_punctatus
ENSEBUG00000006117	sf3b3	100	79.211	ENSSPAG00000003125	sf3b3	100	79.211	Stegastes_partitus
ENSEBUG00000006117	sf3b3	100	87.839	ENSSSCG00000025323	SF3B3	100	87.839	Sus_scrofa
ENSEBUG00000006117	sf3b3	100	87.849	ENSTGUG00000006082	SF3B3	100	87.849	Taeniopygia_guttata
ENSEBUG00000006117	sf3b3	89	86.029	ENSTNIG00000004857	sf3b3	100	86.029	Tetraodon_nigroviridis
ENSEBUG00000006117	sf3b3	82	87.862	ENSTBEG00000002946	SF3B3	88	87.862	Tupaia_belangeri
ENSEBUG00000006117	sf3b3	100	87.017	ENSTTRG00000005855	SF3B3	100	87.017	Tursiops_truncatus
ENSEBUG00000006117	sf3b3	100	87.839	ENSUAMG00000006780	SF3B3	100	87.839	Ursus_americanus
ENSEBUG00000006117	sf3b3	100	87.839	ENSUMAG00000017757	SF3B3	100	87.839	Ursus_maritimus
ENSEBUG00000006117	sf3b3	100	73.377	ENSVPAG00000003202	SF3B3	100	73.377	Vicugna_pacos
ENSEBUG00000006117	sf3b3	100	87.839	ENSVVUG00000017922	SF3B3	100	87.839	Vulpes_vulpes
ENSEBUG00000006117	sf3b3	100	87.264	ENSXETG00000032869	SF3B3	100	87.264	Xenopus_tropicalis
ENSEBUG00000006117	sf3b3	80	84.016	ENSXCOG00000013628	sf3b3	98	84.016	Xiphophorus_couchianus
ENSEBUG00000006117	sf3b3	100	85.867	ENSXMAG00000006334	sf3b3	100	85.867	Xiphophorus_maculatus